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The map label for this gene is ylmD [H]

Identifier: 150008510

GI number: 150008510

Start: 2252203

End: 2253027

Strand: Reverse

Name: ylmD [H]

Synonym: BDI_1896

Alternate gene names: 150008510

Gene position: 2253027-2252203 (Counterclockwise)

Preceding gene: 150008511

Following gene: 150008509

Centisome position: 46.83

GC content: 48.97

Gene sequence:

>825_bases
ATGAAGATGAAGATACAAGAAAATAAGCAAATAGAGGTGTCGCGGTTCTCCGGGTTAAGCGGATACCGCGACATTTCTCA
TTTTACGACAACACGTCATGGCGGCGTGAGTACGGGAACGTACGCTTCGATGAATCCGGGCGTTTATACCGAGGATGATC
CGGGCTTCATCCGGAAGAACTTGGAACTTCTTTCGAATGCGGTCGGGATTTCCCTAGAGAATATGGTTATACCTCATCAG
ACCCATGAGGATCGAGTATTGGCGATCGACGCGTCTTTCCTTTCGCTGAATGATAAAGAGCGAAAGCTACGTTTGGAAGG
CGTGGACGCTTTGGTGACGAATGTTCCGGATGTATGTGTAGCCGTATCTACGGCGGATTGTGTCCCTGTCTTGTTATATG
CGCCGGATCGTAAAGTGGTAGCTGCCGTCCATGCGGGTTGGCGGGGTACGGTTTTACATATAGCTCGTAAGGCGGCAAGC
TTGATGATCGAGGCATACGATTGCGATCCCACTCAATTGGTTGCCGGAATAGGTCCCTCTATCAGTCAAGCGGCATTTGA
GGTGGGAGAGGAAGTCGTAAAAGCTTTTCAAATGGCGGGCTTCCCGATGGAGCGGATTCTTCGACGTAATGCGGAGACTC
AAAAAGCGTATATCGATCTATGGGAAACCAACCGTTTACAATTGTTAGAGGCAGGATTGCTCTCCGAGCATATAGAGATC
GCTGGCATCTGTACTTATATTCGGTATGAGGATTATTTCTCCGCTCGTCGCCTCGGTGTCAAAAGCGGCCGGATTCTTAC
CGGAATATGCTTGAAAAAATCTTAG

Upstream 100 bases:

>100_bases
GTAAGCACGTTGGAATTTGAGGACGACGACGAATACATCTTCCCCGTGGACGAGGACGAGGATGACCCGGATGAGGAATA
CGAGGAATACTGGGACGATG

Downstream 100 bases:

>100_bases
TTATATTGGCTCAAACTTATAATAGACATGATTTCAATCACTCTTTCATCTGAGATATCGGAGGCTTGCCCCGATCTTCA
CGTGTTGGCTATCGCCTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MKMKIQENKQIEVSRFSGLSGYRDISHFTTTRHGGVSTGTYASMNPGVYTEDDPGFIRKNLELLSNAVGISLENMVIPHQ
THEDRVLAIDASFLSLNDKERKLRLEGVDALVTNVPDVCVAVSTADCVPVLLYAPDRKVVAAVHAGWRGTVLHIARKAAS
LMIEAYDCDPTQLVAGIGPSISQAAFEVGEEVVKAFQMAGFPMERILRRNAETQKAYIDLWETNRLQLLEAGLLSEHIEI
AGICTYIRYEDYFSARRLGVKSGRILTGICLKKS

Sequences:

>Translated_274_residues
MKMKIQENKQIEVSRFSGLSGYRDISHFTTTRHGGVSTGTYASMNPGVYTEDDPGFIRKNLELLSNAVGISLENMVIPHQ
THEDRVLAIDASFLSLNDKERKLRLEGVDALVTNVPDVCVAVSTADCVPVLLYAPDRKVVAAVHAGWRGTVLHIARKAAS
LMIEAYDCDPTQLVAGIGPSISQAAFEVGEEVVKAFQMAGFPMERILRRNAETQKAYIDLWETNRLQLLEAGLLSEHIEI
AGICTYIRYEDYFSARRLGVKSGRILTGICLKKS
>Mature_274_residues
MKMKIQENKQIEVSRFSGLSGYRDISHFTTTRHGGVSTGTYASMNPGVYTEDDPGFIRKNLELLSNAVGISLENMVIPHQ
THEDRVLAIDASFLSLNDKERKLRLEGVDALVTNVPDVCVAVSTADCVPVLLYAPDRKVVAAVHAGWRGTVLHIARKAAS
LMIEAYDCDPTQLVAGIGPSISQAAFEVGEEVVKAFQMAGFPMERILRRNAETQKAYIDLWETNRLQLLEAGLLSEHIEI
AGICTYIRYEDYFSARRLGVKSGRILTGICLKKS

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=254, Percent_Identity=25.9842519685039, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI190194372, Length=254, Percent_Identity=25.9842519685039, Blast_Score=91, Evalue=2e-18,
Organism=Escherichia coli, GI1788945, Length=249, Percent_Identity=30.9236947791165, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 30273; Mature: 30273

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKIQENKQIEVSRFSGLSGYRDISHFTTTRHGGVSTGTYASMNPGVYTEDDPGFIRKN
CCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCEECCCCCCEECCCCHHHHHH
LELLSNAVGISLENMVIPHQTHEDRVLAIDASFLSLNDKERKLRLEGVDALVTNVPDVCV
HHHHHHHHCCEEEEEECCCCCCCCEEEEEEEHEECCCCHHHEEECCCHHHHHHCCCCCEE
AVSTADCVPVLLYAPDRKVVAAVHAGWRGTVLHIARKAASLMIEAYDCDPTQLVAGIGPS
EEECCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHEEEEECCCHHHHHHCCCCC
ISQAAFEVGEEVVKAFQMAGFPMERILRRNAETQKAYIDLWETNRLQLLEAGLLSEHIEI
HHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
AGICTYIRYEDYFSARRLGVKSGRILTGICLKKS
EEEEEEEEEHHHHHHHHCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKMKIQENKQIEVSRFSGLSGYRDISHFTTTRHGGVSTGTYASMNPGVYTEDDPGFIRKN
CCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCEECCCCCCEECCCCHHHHHH
LELLSNAVGISLENMVIPHQTHEDRVLAIDASFLSLNDKERKLRLEGVDALVTNVPDVCV
HHHHHHHHCCEEEEEECCCCCCCCEEEEEEEHEECCCCHHHEEECCCHHHHHHCCCCCEE
AVSTADCVPVLLYAPDRKVVAAVHAGWRGTVLHIARKAASLMIEAYDCDPTQLVAGIGPS
EEECCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHEEEEECCCHHHHHHCCCCC
ISQAAFEVGEEVVKAFQMAGFPMERILRRNAETQKAYIDLWETNRLQLLEAGLLSEHIEI
HHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
AGICTYIRYEDYFSARRLGVKSGRILTGICLKKS
EEEEEEEEEHHHHHHHHCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]