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The map label for this gene is ykpA [H]

Identifier: 150008503

GI number: 150008503

Start: 2245232

End: 2246848

Strand: Direct

Name: ykpA [H]

Synonym: BDI_1889

Alternate gene names: 150008503

Gene position: 2245232-2246848 (Clockwise)

Preceding gene: 150008502

Following gene: 150008504

Centisome position: 46.67

GC content: 47.8

Gene sequence:

>1617_bases
ATGATAACAGTTAACAATCTGGACGTACAGTTTGGAAAACGCATCCTTTTTCAGGATGTGAACATGAAGTTTACACCGGG
CAATTGCTACGGTATTATCGGTGCTAACGGGGCCGGAAAATCTACGTTTCTTCGTGTAATCAGCAAGCAATTGGACCCTA
CCAGAGGTAGCGTTAACCTAGGACCGGGCGAACGCCTTTCCGTATTGAGCCAAGATCACTTCGCGTTCGATGAATATACG
GTAATGGATACCGTATTGATGGGGCACACGACCTTATGGGAGGTGATGAGCGAGAAAAACGCCCTTTACGAGAAACCTGA
TTTCAGCGACGCCGACGGTATCCGCGTATCGGAACTGGAAGAGAAATTCGCAGAGATGGAAGGCTGGAACGCAGAGAGCG
ACGCCGCCAACCTATTGAGCGGACTAGGCATCAAGGAGGATTTGCATTATATGTATATGAAGGACTTGAGCGGTAAGCAG
AAAGTACGTGTCTTATTGGCCCGTGCCTTGTTCGGACAGCCCGATAACCTATTATTGGATGAGCCGACGAACGACTTGGA
CCTTGAGACGGTTTCTTGGTTGGAGAATTATCTCTCTAATTTCGAGCATACCGTATTGGTTGTTAGCCACGACCGTCACT
TCCTCGACTCCGTTTGTACGCATACCGTGGATATCGACTTTGGTAAATTACAATTATTCGCCGGAAACTATAGCTTCTGG
TACGAGTCTAGCCAGTTAGCCCTTCGTCAACAGCAGAACCAGAATAAGAAAGCCGAGGAGAAGAAGAAAGAGTTGGAAGA
ATTTATCCGCCGTTTCAGCGCCAACGTAGCGAAGTCCAAGCAGACCACCAGTCGCAAGAAGATGTTGGAGAAGCTGAATA
TCGAGGAGATCAAACCGTCCTCACGCCGCTATCCGGGAATCTTGTTCACGCCTAACCGCGAACCGGGCAACCAGATCCTA
GAGGTGAAAGGATTGTCGAAGAGTATCGACGGACAGGTATTGTTCAAGGACTTGAACTTCTTCGTGGAGAAGGATGACAA
GATCGTATTTATCAGTCACGACCCTCGTGCCATGACCGCCTTGTTCCAGATCATCAACGGTGAGGAGAAAGCGGATGCCG
GTACGTATCAGTGGGGACAGACGATCACGACCTCTTATCTTCCTCTCGATAACTCCAAATATTTCAATACAGATATCAAC
CTGCTCGATTGGTTATGCCAGTTCTCGCCGGATACTAACGAGGTATTCTTGAAAGGCTTCCTCGGACGTATGTTGTTCTC
GGGCGAGGAGCTTATGAAAAAGGTAAGCGTACTTTCCGGAGGTGAGAAGATGCGTTGTATGATCTCACGTATGATGCTCA
CCGACGCCAACTGCTTGATCTTGGATACTCCGACCAACCACTTGGACTTGGAATCCATCCAAGCCTTCAATAATACGTTG
AAGACATTCAAGGGAAATATCCTGTTCTCCAGTCATGACCACGAGTTCATACAGACCGTGGCGAACCGTATCATCGAGCT
GACTCCTAACGGTATCATCGATAAGATGATGGATTACGATGATTACATCACAGATCCGGCTATCGCGGAGTTACGGGAAA
AGTTATATTCGAAATGA

Upstream 100 bases:

>100_bases
AAGGGAGAGAACGAGCGGGATGTATGACATCCAATGATAAGATAAACAATATTTTTCGTACCTTTGCATCCTCAATCGCA
ATTTAATAGGTATACGAAAT

Downstream 100 bases:

>100_bases
AAAAAAGATTATTATTCATACTAATCGTTTTTATCGCATGGCTACCGGTTTTTGTTATTCAAAAACCGGTATTTATGTTT
TATCAGCATGCGTTGTCCGA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 538; Mature: 538

Protein sequence:

>538_residues
MITVNNLDVQFGKRILFQDVNMKFTPGNCYGIIGANGAGKSTFLRVISKQLDPTRGSVNLGPGERLSVLSQDHFAFDEYT
VMDTVLMGHTTLWEVMSEKNALYEKPDFSDADGIRVSELEEKFAEMEGWNAESDAANLLSGLGIKEDLHYMYMKDLSGKQ
KVRVLLARALFGQPDNLLLDEPTNDLDLETVSWLENYLSNFEHTVLVVSHDRHFLDSVCTHTVDIDFGKLQLFAGNYSFW
YESSQLALRQQQNQNKKAEEKKKELEEFIRRFSANVAKSKQTTSRKKMLEKLNIEEIKPSSRRYPGILFTPNREPGNQIL
EVKGLSKSIDGQVLFKDLNFFVEKDDKIVFISHDPRAMTALFQIINGEEKADAGTYQWGQTITTSYLPLDNSKYFNTDIN
LLDWLCQFSPDTNEVFLKGFLGRMLFSGEELMKKVSVLSGGEKMRCMISRMMLTDANCLILDTPTNHLDLESIQAFNNTL
KTFKGNILFSSHDHEFIQTVANRIIELTPNGIIDKMMDYDDYITDPAIAELREKLYSK

Sequences:

>Translated_538_residues
MITVNNLDVQFGKRILFQDVNMKFTPGNCYGIIGANGAGKSTFLRVISKQLDPTRGSVNLGPGERLSVLSQDHFAFDEYT
VMDTVLMGHTTLWEVMSEKNALYEKPDFSDADGIRVSELEEKFAEMEGWNAESDAANLLSGLGIKEDLHYMYMKDLSGKQ
KVRVLLARALFGQPDNLLLDEPTNDLDLETVSWLENYLSNFEHTVLVVSHDRHFLDSVCTHTVDIDFGKLQLFAGNYSFW
YESSQLALRQQQNQNKKAEEKKKELEEFIRRFSANVAKSKQTTSRKKMLEKLNIEEIKPSSRRYPGILFTPNREPGNQIL
EVKGLSKSIDGQVLFKDLNFFVEKDDKIVFISHDPRAMTALFQIINGEEKADAGTYQWGQTITTSYLPLDNSKYFNTDIN
LLDWLCQFSPDTNEVFLKGFLGRMLFSGEELMKKVSVLSGGEKMRCMISRMMLTDANCLILDTPTNHLDLESIQAFNNTL
KTFKGNILFSSHDHEFIQTVANRIIELTPNGIIDKMMDYDDYITDPAIAELREKLYSK
>Mature_538_residues
MITVNNLDVQFGKRILFQDVNMKFTPGNCYGIIGANGAGKSTFLRVISKQLDPTRGSVNLGPGERLSVLSQDHFAFDEYT
VMDTVLMGHTTLWEVMSEKNALYEKPDFSDADGIRVSELEEKFAEMEGWNAESDAANLLSGLGIKEDLHYMYMKDLSGKQ
KVRVLLARALFGQPDNLLLDEPTNDLDLETVSWLENYLSNFEHTVLVVSHDRHFLDSVCTHTVDIDFGKLQLFAGNYSFW
YESSQLALRQQQNQNKKAEEKKKELEEFIRRFSANVAKSKQTTSRKKMLEKLNIEEIKPSSRRYPGILFTPNREPGNQIL
EVKGLSKSIDGQVLFKDLNFFVEKDDKIVFISHDPRAMTALFQIINGEEKADAGTYQWGQTITTSYLPLDNSKYFNTDIN
LLDWLCQFSPDTNEVFLKGFLGRMLFSGEELMKKVSVLSGGEKMRCMISRMMLTDANCLILDTPTNHLDLESIQAFNNTL
KTFKGNILFSSHDHEFIQTVANRIIELTPNGIIDKMMDYDDYITDPAIAELREKLYSK

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=528, Percent_Identity=28.9772727272727, Blast_Score=252, Evalue=5e-67,
Organism=Homo sapiens, GI10947137, Length=512, Percent_Identity=28.90625, Blast_Score=205, Evalue=7e-53,
Organism=Homo sapiens, GI27881506, Length=512, Percent_Identity=28.90625, Blast_Score=205, Evalue=9e-53,
Organism=Homo sapiens, GI69354671, Length=549, Percent_Identity=26.2295081967213, Blast_Score=172, Evalue=6e-43,
Organism=Homo sapiens, GI10947135, Length=535, Percent_Identity=26.7289719626168, Blast_Score=172, Evalue=6e-43,
Organism=Escherichia coli, GI1787041, Length=529, Percent_Identity=42.34404536862, Blast_Score=483, Evalue=1e-137,
Organism=Escherichia coli, GI2367384, Length=527, Percent_Identity=30.9297912713473, Blast_Score=241, Evalue=9e-65,
Organism=Escherichia coli, GI1789751, Length=503, Percent_Identity=28.4294234592445, Blast_Score=235, Evalue=4e-63,
Organism=Escherichia coli, GI1787182, Length=519, Percent_Identity=26.7822736030828, Blast_Score=189, Evalue=5e-49,
Organism=Escherichia coli, GI1786398, Length=238, Percent_Identity=29.4117647058824, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1787029, Length=233, Percent_Identity=27.8969957081545, Blast_Score=82, Evalue=9e-17,
Organism=Escherichia coli, GI1788644, Length=241, Percent_Identity=29.045643153527, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1788761, Length=258, Percent_Identity=25.968992248062, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1788450, Length=234, Percent_Identity=26.0683760683761, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1787105, Length=206, Percent_Identity=26.6990291262136, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787164, Length=241, Percent_Identity=26.1410788381743, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=517, Percent_Identity=31.7214700193424, Blast_Score=239, Evalue=3e-63,
Organism=Caenorhabditis elegans, GI17559834, Length=553, Percent_Identity=28.0289330922242, Blast_Score=204, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI17555318, Length=516, Percent_Identity=26.937984496124, Blast_Score=201, Evalue=8e-52,
Organism=Caenorhabditis elegans, GI17565938, Length=201, Percent_Identity=26.865671641791, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=550, Percent_Identity=29.6363636363636, Blast_Score=218, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6320874, Length=522, Percent_Identity=28.9272030651341, Blast_Score=207, Evalue=3e-54,
Organism=Saccharomyces cerevisiae, GI6325030, Length=245, Percent_Identity=33.0612244897959, Blast_Score=109, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6324314, Length=243, Percent_Identity=29.6296296296296, Blast_Score=98, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6323278, Length=256, Percent_Identity=28.90625, Blast_Score=95, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24666836, Length=511, Percent_Identity=30.7240704500978, Blast_Score=262, Evalue=5e-70,
Organism=Drosophila melanogaster, GI24642252, Length=548, Percent_Identity=25.3649635036496, Blast_Score=197, Evalue=2e-50,
Organism=Drosophila melanogaster, GI18859989, Length=548, Percent_Identity=25.3649635036496, Blast_Score=197, Evalue=2e-50,
Organism=Drosophila melanogaster, GI24641342, Length=537, Percent_Identity=27.9329608938547, Blast_Score=194, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 61391; Mature: 61391

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVNNLDVQFGKRILFQDVNMKFTPGNCYGIIGANGAGKSTFLRVISKQLDPTRGSVNL
CEEECCCCHHHCCEEEEECCCEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEC
GPGERLSVLSQDHFAFDEYTVMDTVLMGHTTLWEVMSEKNALYEKPDFSDADGIRVSELE
CCCCHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
EKFAEMEGWNAESDAANLLSGLGIKEDLHYMYMKDLSGKQKVRVLLARALFGQPDNLLLD
HHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEE
EPTNDLDLETVSWLENYLSNFEHTVLVVSHDRHFLDSVCTHTVDIDFGKLQLFAGNYSFW
CCCCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHEEECCCCEEEEEECCEEEE
YESSQLALRQQQNQNKKAEEKKKELEEFIRRFSANVAKSKQTTSRKKMLEKLNIEEIKPS
ECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCC
SRRYPGILFTPNREPGNQILEVKGLSKSIDGQVLFKDLNFFVEKDDKIVFISHDPRAMTA
CCCCCCEEECCCCCCCCCEEEEECCCCCCCCEEEEEEHHHHEECCCEEEEEECCCHHHHH
LFQIINGEEKADAGTYQWGQTITTSYLPLDNSKYFNTDINLLDWLCQFSPDTNEVFLKGF
HHHHHCCCCCCCCCCEECCCEEEEEEECCCCCCEECCCHHHHHHHHHCCCCCHHHHHHHH
LGRMLFSGEELMKKVSVLSGGEKMRCMISRMMLTDANCLILDTPTNHLDLESIQAFNNTL
HHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH
KTFKGNILFSSHDHEFIQTVANRIIELTPNGIIDKMMDYDDYITDPAIAELREKLYSK
HHHCCCEEEECCCHHHHHHHHHHHEECCCCHHHHHHHCCHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MITVNNLDVQFGKRILFQDVNMKFTPGNCYGIIGANGAGKSTFLRVISKQLDPTRGSVNL
CEEECCCCHHHCCEEEEECCCEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEC
GPGERLSVLSQDHFAFDEYTVMDTVLMGHTTLWEVMSEKNALYEKPDFSDADGIRVSELE
CCCCHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
EKFAEMEGWNAESDAANLLSGLGIKEDLHYMYMKDLSGKQKVRVLLARALFGQPDNLLLD
HHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEE
EPTNDLDLETVSWLENYLSNFEHTVLVVSHDRHFLDSVCTHTVDIDFGKLQLFAGNYSFW
CCCCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHEEECCCCEEEEEECCEEEE
YESSQLALRQQQNQNKKAEEKKKELEEFIRRFSANVAKSKQTTSRKKMLEKLNIEEIKPS
ECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCC
SRRYPGILFTPNREPGNQILEVKGLSKSIDGQVLFKDLNFFVEKDDKIVFISHDPRAMTA
CCCCCCEEECCCCCCCCCEEEEECCCCCCCCEEEEEEHHHHEECCCEEEEEECCCHHHHH
LFQIINGEEKADAGTYQWGQTITTSYLPLDNSKYFNTDINLLDWLCQFSPDTNEVFLKGF
HHHHHCCCCCCCCCCEECCCEEEEEEECCCCCCEECCCHHHHHHHHHCCCCCHHHHHHHH
LGRMLFSGEELMKKVSVLSGGEKMRCMISRMMLTDANCLILDTPTNHLDLESIQAFNNTL
HHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH
KTFKGNILFSSHDHEFIQTVANRIIELTPNGIIDKMMDYDDYITDPAIAELREKLYSK
HHHCCCEEEECCCHHHHHHHHHHHEECCCCHHHHHHHCCHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]