| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008502
Identifier: 150008502
GI number: 150008502
Start: 2244313
End: 2245158
Strand: Direct
Name: 150008502
Synonym: BDI_1888
Alternate gene names: NA
Gene position: 2244313-2245158 (Clockwise)
Preceding gene: 150008493
Following gene: 150008503
Centisome position: 46.65
GC content: 42.67
Gene sequence:
>846_bases ATGACACAAAAAGAATCTATCCGCTTATTCGAAGAAAGAAAAGTTCGCGCCATATGGGATGACGAACAAGAGGAATGGTA TTTCTCGATCGTTGATGTTATATCTATTTTAACAGATAGCCCCAACCCTCGAAAATACTGGAGTGTATTAAAAACCAGAT TGAAAAGAGAAGGTAGCGAGTTGACTACAAATTGTAGTCAACTGAAAATGCAGGCCGCTGATGGCAAGAAATATTTAACC GACGTAGCCAATACCGAGCAACTCTTCCGCCTTATCCAATCAGTACCATCTCCAAAAGCAGAACCTTTTAAGTTATGGAT CGCCCAAGTAGCGAAGGAACGTTTGGATCAAATGCAAGACCCGGAATTGTCTATCGAGCAAGCCATGGCCGATTATAAAC GATTGGGCTATTCGGATAATTGGATCAACCAACGATTGAAATCCATCGAGATACGGAAAGATCTAACAGACGAATGGAAG AAGAGAGGACTGGAAGAAGGCCTCCATTTCGCTACATTAACCGACATAATCTATAAGTCATGGTCCGACATGACCTCCAA GGAATATAAACGATTCAAAGGATTAAGAAAAGAGAATCTTCGAGATAATATGACAAACAAAGAGCTTGTATTAAACATGC TGGCCGAGTTATCTACCAAGGAAATATCAGAAGCATCGGAACCAGACACCTTTAGCGAGCACATAAATGTCGCCCAACAA GGAGGCGAGGTGGCTCGTAACGCCCGATTAGAGCTGGAAGCCAAAACCGGGAAAAGCGTTATCTCACCGCTCAACGCCCA AAAGATAATTAGCCTAAAAAAGGGAGAGAACGAGCGGGATGTATGA
Upstream 100 bases:
>100_bases TACTTACTTTGCGATAAATAAACTTTTAATCAAACTATTAAACTATGGATATACTAAATTCTCATTTACCTTTGTCTATA ACTACTCAAAGCAACTACAA
Downstream 100 bases:
>100_bases CATCCAATGATAAGATAAACAATATTTTTCGTACCTTTGCATCCTCAATCGCAATTTAATAGGTATACGAAATATGATAA CAGTTAACAATCTGGACGTA
Product: putative DNA repair ATPase
Products: NA
Alternate protein names: Cell Filamentation Protein; Phage Related Protein; DNA-Damage-Inducible Protein D; Filamentation Induced By CAMP Protein Fic; DNA Repair ATPase
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MTQKESIRLFEERKVRAIWDDEQEEWYFSIVDVISILTDSPNPRKYWSVLKTRLKREGSELTTNCSQLKMQAADGKKYLT DVANTEQLFRLIQSVPSPKAEPFKLWIAQVAKERLDQMQDPELSIEQAMADYKRLGYSDNWINQRLKSIEIRKDLTDEWK KRGLEEGLHFATLTDIIYKSWSDMTSKEYKRFKGLRKENLRDNMTNKELVLNMLAELSTKEISEASEPDTFSEHINVAQQ GGEVARNARLELEAKTGKSVISPLNAQKIISLKKGENERDV
Sequences:
>Translated_281_residues MTQKESIRLFEERKVRAIWDDEQEEWYFSIVDVISILTDSPNPRKYWSVLKTRLKREGSELTTNCSQLKMQAADGKKYLT DVANTEQLFRLIQSVPSPKAEPFKLWIAQVAKERLDQMQDPELSIEQAMADYKRLGYSDNWINQRLKSIEIRKDLTDEWK KRGLEEGLHFATLTDIIYKSWSDMTSKEYKRFKGLRKENLRDNMTNKELVLNMLAELSTKEISEASEPDTFSEHINVAQQ GGEVARNARLELEAKTGKSVISPLNAQKIISLKKGENERDV >Mature_280_residues TQKESIRLFEERKVRAIWDDEQEEWYFSIVDVISILTDSPNPRKYWSVLKTRLKREGSELTTNCSQLKMQAADGKKYLTD VANTEQLFRLIQSVPSPKAEPFKLWIAQVAKERLDQMQDPELSIEQAMADYKRLGYSDNWINQRLKSIEIRKDLTDEWKK RGLEEGLHFATLTDIIYKSWSDMTSKEYKRFKGLRKENLRDNMTNKELVLNMLAELSTKEISEASEPDTFSEHINVAQQG GEVARNARLELEAKTGKSVISPLNAQKIISLKKGENERDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32680; Mature: 32549
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQKESIRLFEERKVRAIWDDEQEEWYFSIVDVISILTDSPNPRKYWSVLKTRLKREGSE CCCHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHH LTTNCSQLKMQAADGKKYLTDVANTEQLFRLIQSVPSPKAEPFKLWIAQVAKERLDQMQD HHCCHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC PELSIEQAMADYKRLGYSDNWINQRLKSIEIRKDLTDEWKKRGLEEGLHFATLTDIIYKS CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHH WSDMTSKEYKRFKGLRKENLRDNMTNKELVLNMLAELSTKEISEASEPDTFSEHINVAQQ HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH GGEVARNARLELEAKTGKSVISPLNAQKIISLKKGENERDV CHHHHHCCCEEEECCCCHHHHCCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure TQKESIRLFEERKVRAIWDDEQEEWYFSIVDVISILTDSPNPRKYWSVLKTRLKREGSE CCHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHH LTTNCSQLKMQAADGKKYLTDVANTEQLFRLIQSVPSPKAEPFKLWIAQVAKERLDQMQD HHCCHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC PELSIEQAMADYKRLGYSDNWINQRLKSIEIRKDLTDEWKKRGLEEGLHFATLTDIIYKS CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHH WSDMTSKEYKRFKGLRKENLRDNMTNKELVLNMLAELSTKEISEASEPDTFSEHINVAQQ HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH GGEVARNARLELEAKTGKSVISPLNAQKIISLKKGENERDV CHHHHHCCCEEEECCCCHHHHCCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA