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The map label for this gene is mrdB [H]

Identifier: 150008494

GI number: 150008494

Start: 2235400

End: 2236845

Strand: Reverse

Name: mrdB [H]

Synonym: BDI_1880

Alternate gene names: 150008494

Gene position: 2236845-2235400 (Counterclockwise)

Preceding gene: 150008495

Following gene: 150008490

Centisome position: 46.49

GC content: 44.19

Gene sequence:

>1446_bases
ATGCGCTATAGGAAAACGGAAATATGGAAGTCGGTAGACTGGATTACCATTTTGTTGTATTTGATTATGGTAATCGCCGG
TTGGTTTAGTATTTGTGGGGCGAGCTACGAGTTTGATAACGTTGGCTTGTTCGACCCGTCGGGCCGTCCGGGGATGCAGA
TGATTTGGATCGGTACCTCACTCGCCCTTATTTTCGTCATATTGATGCTGGAAAGTGACTTCTTCGATATATTCGCCTAT
CTGATCTATGCGTGCGTGATCGTATTGTTGATCGCCACTATATTTTTAGCACCTAATATCAAGGGATCGCATTCTTGGCT
CGTATTGGGACCTATCCGTTTGCAACCAGCGGAGTTGGCTAAGTTCGCTACCGCTTTGGCCGTGGCGAAGTTTATGAATG
GCTATGGCTTTAAGCTAACGACGGTCAAGAATTTCTCAATCACTTTGTTCTTGATCTTCTTGCCGATGGTTTGTATTCTT
TTACAGAAAGAGACGGGGTCGGCATTGGTTTACTTGGCATTCTTCCTGATGTTATACCGGGAAGGAATGACTGGATATAT
TTTGTTGATAGGAGTTTGTGCGGTCGTCTTTTTCGTTACGGGAATGAAATATTCAGAGGTGATGGTGGGTATTACCCCAT
TGGGTGAATTAATCGTCTCTTGCCTTGTCTTATTAATAACCATGGGATTAGTTGGGAGTGTCCGTAAGGATTATATAAGC
GTTAAGATCATGCTTGGGGGAATTGCTTCGACATTCTTGATCGGGTATGTCGTTTCTTTGTTTGTCCCGGTAAACTTCGC
TTGGATATCGATAGGCTTGGTAGGAGCCGCGTCAATCTATTTATTCTATTTATCCATTCGAAACTGGGTATGGCATTATG
CGTTAATCGCTCTGTTCGCTTTAGGTTCTATCTGTTTCCTATTTTCTGTGGATTATGTGTTTAATGACATATTGGAACCT
CACCAACAAATTCGTATTAAAGTCTCTTTAGGCTTGGAGGATGATCCAAGCGGGGCGGGGTATAATGTGAATCAGTCCAA
GATCGCTATCGGTTCCGGAGGATTATCCGGAAAAGGATTCTTGAATGGGACGCAGACCAAATTGAAGTATGTGCCGGAAC
AGGATACGGATTTTATCTTTTGTACGGTAGGCGAGGAGCAAGGCTTTTTGGGAGCCTCTGCCGTATTGATCGTATTCGGA
CTTTTTATTCTTCGTCTGATTGTATTGGCGGAGCGGCAAGATAATGCTTTCGGGCGAGTCTATGGCTATAGCGTAGCCTC
CATATTCTTTTTCCATCTGGCGATTAATGTCGGCATGGTGACGGGATTGACTCCGGTTATCGGCATTCCCTTGCCTTTCT
TTAGCTATGGAGGTTCCTCGCTTTGGGGATTTACGATCTTATTGTTTATTTTTCTTCGTTTGGACGCTTCTCGGAAGGAG
CGTTAG

Upstream 100 bases:

>100_bases
ATCGGTAAATTGATGTTGGAGAAATATTTGAAAGGAGAAATATCCGAGGCTAACAAGGCGACGGAGGAATATATTATGAA
TGCCGTAATACTACCGAACA

Downstream 100 bases:

>100_bases
TGGAAGAAGGTAAGACCCGTAAGCCGATTTCCTGAATGCCCGGAAGTTGGTCGTTACGCATCCCCTGCCGGAAGCTAAAG
GTATATTGCCCTTTAACGGG

Product: rod shape-determining protein RodA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MRYRKTEIWKSVDWITILLYLIMVIAGWFSICGASYEFDNVGLFDPSGRPGMQMIWIGTSLALIFVILMLESDFFDIFAY
LIYACVIVLLIATIFLAPNIKGSHSWLVLGPIRLQPAELAKFATALAVAKFMNGYGFKLTTVKNFSITLFLIFLPMVCIL
LQKETGSALVYLAFFLMLYREGMTGYILLIGVCAVVFFVTGMKYSEVMVGITPLGELIVSCLVLLITMGLVGSVRKDYIS
VKIMLGGIASTFLIGYVVSLFVPVNFAWISIGLVGAASIYLFYLSIRNWVWHYALIALFALGSICFLFSVDYVFNDILEP
HQQIRIKVSLGLEDDPSGAGYNVNQSKIAIGSGGLSGKGFLNGTQTKLKYVPEQDTDFIFCTVGEEQGFLGASAVLIVFG
LFILRLIVLAERQDNAFGRVYGYSVASIFFFHLAINVGMVTGLTPVIGIPLPFFSYGGSSLWGFTILLFIFLRLDASRKE
R

Sequences:

>Translated_481_residues
MRYRKTEIWKSVDWITILLYLIMVIAGWFSICGASYEFDNVGLFDPSGRPGMQMIWIGTSLALIFVILMLESDFFDIFAY
LIYACVIVLLIATIFLAPNIKGSHSWLVLGPIRLQPAELAKFATALAVAKFMNGYGFKLTTVKNFSITLFLIFLPMVCIL
LQKETGSALVYLAFFLMLYREGMTGYILLIGVCAVVFFVTGMKYSEVMVGITPLGELIVSCLVLLITMGLVGSVRKDYIS
VKIMLGGIASTFLIGYVVSLFVPVNFAWISIGLVGAASIYLFYLSIRNWVWHYALIALFALGSICFLFSVDYVFNDILEP
HQQIRIKVSLGLEDDPSGAGYNVNQSKIAIGSGGLSGKGFLNGTQTKLKYVPEQDTDFIFCTVGEEQGFLGASAVLIVFG
LFILRLIVLAERQDNAFGRVYGYSVASIFFFHLAINVGMVTGLTPVIGIPLPFFSYGGSSLWGFTILLFIFLRLDASRKE
R
>Mature_481_residues
MRYRKTEIWKSVDWITILLYLIMVIAGWFSICGASYEFDNVGLFDPSGRPGMQMIWIGTSLALIFVILMLESDFFDIFAY
LIYACVIVLLIATIFLAPNIKGSHSWLVLGPIRLQPAELAKFATALAVAKFMNGYGFKLTTVKNFSITLFLIFLPMVCIL
LQKETGSALVYLAFFLMLYREGMTGYILLIGVCAVVFFVTGMKYSEVMVGITPLGELIVSCLVLLITMGLVGSVRKDYIS
VKIMLGGIASTFLIGYVVSLFVPVNFAWISIGLVGAASIYLFYLSIRNWVWHYALIALFALGSICFLFSVDYVFNDILEP
HQQIRIKVSLGLEDDPSGAGYNVNQSKIAIGSGGLSGKGFLNGTQTKLKYVPEQDTDFIFCTVGEEQGFLGASAVLIVFG
LFILRLIVLAERQDNAFGRVYGYSVASIFFFHLAINVGMVTGLTPVIGIPLPFFSYGGSSLWGFTILLFIFLRLDASRKE
R

Specific function: This is one of the proteins responsible for the rod shape of the cell [H]

COG id: COG0772

COG function: function code D; Bacterial cell division membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ftsW/rodA/spoVE family [H]

Homologues:

Organism=Escherichia coli, GI1786853, Length=145, Percent_Identity=47.5862068965517, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1786277, Length=167, Percent_Identity=36.5269461077844, Blast_Score=103, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001182
- InterPro:   IPR018365
- InterPro:   IPR011923 [H]

Pfam domain/function: PF01098 FTSW_RODA_SPOVE [H]

EC number: NA

Molecular weight: Translated: 53259; Mature: 53259

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: PS00428 FTSW_RODA_SPOVE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYRKTEIWKSVDWITILLYLIMVIAGWFSICGASYEFDNVGLFDPSGRPGMQMIWIGTS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEHHH
LALIFVILMLESDFFDIFAYLIYACVIVLLIATIFLAPNIKGSHSWLVLGPIRLQPAELA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHH
KFATALAVAKFMNGYGFKLTTVKNFSITLFLIFLPMVCILLQKETGSALVYLAFFLMLYR
HHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
EGMTGYILLIGVCAVVFFVTGMKYSEVMVGITPLGELIVSCLVLLITMGLVGSVRKDYIS
CCCCHHHHHHHHHHHHHHHHCCCHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHEE
VKIMLGGIASTFLIGYVVSLFVPVNFAWISIGLVGAASIYLFYLSIRNWVWHYALIALFA
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGSICFLFSVDYVFNDILEPHQQIRIKVSLGLEDDPSGAGYNVNQSKIAIGSGGLSGKGF
HHHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCC
LNGTQTKLKYVPEQDTDFIFCTVGEEQGFLGASAVLIVFGLFILRLIVLAERQDNAFGRV
CCCCCHHEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
YGYSVASIFFFHLAINVGMVTGLTPVIGIPLPFFSYGGSSLWGFTILLFIFLRLDASRKE
HHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCC
R
C
>Mature Secondary Structure
MRYRKTEIWKSVDWITILLYLIMVIAGWFSICGASYEFDNVGLFDPSGRPGMQMIWIGTS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEHHH
LALIFVILMLESDFFDIFAYLIYACVIVLLIATIFLAPNIKGSHSWLVLGPIRLQPAELA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHH
KFATALAVAKFMNGYGFKLTTVKNFSITLFLIFLPMVCILLQKETGSALVYLAFFLMLYR
HHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
EGMTGYILLIGVCAVVFFVTGMKYSEVMVGITPLGELIVSCLVLLITMGLVGSVRKDYIS
CCCCHHHHHHHHHHHHHHHHCCCHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHEE
VKIMLGGIASTFLIGYVVSLFVPVNFAWISIGLVGAASIYLFYLSIRNWVWHYALIALFA
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGSICFLFSVDYVFNDILEPHQQIRIKVSLGLEDDPSGAGYNVNQSKIAIGSGGLSGKGF
HHHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCC
LNGTQTKLKYVPEQDTDFIFCTVGEEQGFLGASAVLIVFGLFILRLIVLAERQDNAFGRV
CCCCCHHEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
YGYSVASIFFFHLAINVGMVTGLTPVIGIPLPFFSYGGSSLWGFTILLFIFLRLDASRKE
HHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]