Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is yhhX [C]

Identifier: 150008484

GI number: 150008484

Start: 2223028

End: 2224191

Strand: Direct

Name: yhhX [C]

Synonym: BDI_1870

Alternate gene names: 150008484

Gene position: 2223028-2224191 (Clockwise)

Preceding gene: 150008483

Following gene: 150008485

Centisome position: 46.2

GC content: 46.13

Gene sequence:

>1164_bases
ATGAATAGAAAAGAATTCTTTAAAGTATCTGCCGCAGCAAGTCTAGCGTCACTACTATCCCCTCTTTCCGCCTATGCGGA
GAAATTCGAGTCGGAAGGTAAAAAGGTGAAAGTAGCCGTTATCGGTTGCGGAAGTGTATCTACCCAATATTTTCCCCATA
TATCGAAATGCCCGTATGTAGAAATCGTGGCTTGTTGCGATATCAAACCGGATCGTGCTCAAAAGGCGGCCAAGCAATAT
AATATACCTAAATGGTACAAGCATATCGATGATATGCTTAGCGGTTCCAAGTTCGACTTGATGCTTACATTGACCGATAT
GCAGGTTCACGGAGAGTTGAACCGTAAGGCTTTGATGGCGGGAAGAAATGTCTGGAGCGAGAAACCTTTGGCGAATTCCT
ATAAGGAAGGCAAAGAATTATACGATCTCGCTACGAGCAAGGGACTTCGTATCTGGGGTGCGCCTGCCGTTGTAAACAGT
CCTCAATTTGCCTTTATGGCCGAACAAATCAATAAAGGAACCCTAGGTAATCTGGCATGTGCGCACGGACATTACGGACA
TGAAGGCCCTTCTTGGTCCGCTTTCTTCTACGAACCGCTAGGTGGCAGTATGCCCGACTTAGGAGTCTATAACATCGCTA
CCCTAACCGGATTATTGGGACCGGCTAAATCCGTTGTTGCCATGACTACAATCGTAACCCCGGAGAGAACCGTAGACGAT
AAGGGCAAAATCAAAGTTCGAGAAGAAGATAATGCCATGATTATCATGGAACACGAAAAGGGAGTCCTTTCTCATATCGA
GTGTGGTTTCAATTATTTCGATCCATACGGACATTTAGGTAAAGGACAGGAGAAAGCGACGATCTCCTTATACGGTTCCC
ACGGCAATATGCATATGGTAGGTTACGACTGGGCACCAAACGGGGTGGACTTATCGACGATGGATCATCCGGTACCCCAA
CGTTTCGTTCCGGACACCAATGGCTATGTTTGGCAAGAAGGAGCTTCCGATATCAGCAAACACATGGCATTAAACACGGA
ACCACGTATAAATGTCGAGCATGCGTTACACGTATTAGAGATTATCGAGGCCGCCCGAAAATCACAAGCTACAGGTCAAC
GCATCCAGCTTGTATCGAAGTTTCCTTGGCCGATGGTAAAATAA

Upstream 100 bases:

>100_bases
TACCACCGGTAAACTTTGTTTTCAGGACCATGGAAGTAAAGTATATTTCAAGAATGTGAAGATTAAGGATTTAGACTAAT
TGTATTAAGAAATCAATGCC

Downstream 100 bases:

>100_bases
ATTAAGAAGTCTTAGTAGTGAAAAGAACGGGACATTTAATATATTTGTTCCTGTAAATACCAGAGAAACATGAGGAAGAT
AAGTGAAATTTTATGCTGCG

Product: putative dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MNRKEFFKVSAAASLASLLSPLSAYAEKFESEGKKVKVAVIGCGSVSTQYFPHISKCPYVEIVACCDIKPDRAQKAAKQY
NIPKWYKHIDDMLSGSKFDLMLTLTDMQVHGELNRKALMAGRNVWSEKPLANSYKEGKELYDLATSKGLRIWGAPAVVNS
PQFAFMAEQINKGTLGNLACAHGHYGHEGPSWSAFFYEPLGGSMPDLGVYNIATLTGLLGPAKSVVAMTTIVTPERTVDD
KGKIKVREEDNAMIIMEHEKGVLSHIECGFNYFDPYGHLGKGQEKATISLYGSHGNMHMVGYDWAPNGVDLSTMDHPVPQ
RFVPDTNGYVWQEGASDISKHMALNTEPRINVEHALHVLEIIEAARKSQATGQRIQLVSKFPWPMVK

Sequences:

>Translated_387_residues
MNRKEFFKVSAAASLASLLSPLSAYAEKFESEGKKVKVAVIGCGSVSTQYFPHISKCPYVEIVACCDIKPDRAQKAAKQY
NIPKWYKHIDDMLSGSKFDLMLTLTDMQVHGELNRKALMAGRNVWSEKPLANSYKEGKELYDLATSKGLRIWGAPAVVNS
PQFAFMAEQINKGTLGNLACAHGHYGHEGPSWSAFFYEPLGGSMPDLGVYNIATLTGLLGPAKSVVAMTTIVTPERTVDD
KGKIKVREEDNAMIIMEHEKGVLSHIECGFNYFDPYGHLGKGQEKATISLYGSHGNMHMVGYDWAPNGVDLSTMDHPVPQ
RFVPDTNGYVWQEGASDISKHMALNTEPRINVEHALHVLEIIEAARKSQATGQRIQLVSKFPWPMVK
>Mature_387_residues
MNRKEFFKVSAAASLASLLSPLSAYAEKFESEGKKVKVAVIGCGSVSTQYFPHISKCPYVEIVACCDIKPDRAQKAAKQY
NIPKWYKHIDDMLSGSKFDLMLTLTDMQVHGELNRKALMAGRNVWSEKPLANSYKEGKELYDLATSKGLRIWGAPAVVNS
PQFAFMAEQINKGTLGNLACAHGHYGHEGPSWSAFFYEPLGGSMPDLGVYNIATLTGLLGPAKSVVAMTTIVTPERTVDD
KGKIKVREEDNAMIIMEHEKGVLSHIECGFNYFDPYGHLGKGQEKATISLYGSHGNMHMVGYDWAPNGVDLSTMDHPVPQ
RFVPDTNGYVWQEGASDISKHMALNTEPRINVEHALHVLEIIEAARKSQATGQRIQLVSKFPWPMVK

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1789848, Length=186, Percent_Identity=26.3440860215054, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42780; Mature: 42780

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRKEFFKVSAAASLASLLSPLSAYAEKFESEGKKVKVAVIGCGSVSTQYFPHISKCPYV
CCHHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHCCCCCCCCCE
EIVACCDIKPDRAQKAAKQYNIPKWYKHIDDMLSGSKFDLMLTLTDMQVHGELNRKALMA
EEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCHHHHHH
GRNVWSEKPLANSYKEGKELYDLATSKGLRIWGAPAVVNSPQFAFMAEQINKGTLGNLAC
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCHHHHHHHHCCCCCCCEEE
AHGHYGHEGPSWSAFFYEPLGGSMPDLGVYNIATLTGLLGPAKSVVAMTTIVTPERTVDD
ECCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHEEEEEEECCCCCCCC
KGKIKVREEDNAMIIMEHEKGVLSHIECGFNYFDPYGHLGKGQEKATISLYGSHGNMHMV
CCCEEEEECCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEE
GYDWAPNGVDLSTMDHPVPQRFVPDTNGYVWQEGASDISKHMALNTEPRINVEHALHVLE
EECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHH
IIEAARKSQATGQRIQLVSKFPWPMVK
HHHHHHHHCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNRKEFFKVSAAASLASLLSPLSAYAEKFESEGKKVKVAVIGCGSVSTQYFPHISKCPYV
CCHHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHCCCCCCCCCE
EIVACCDIKPDRAQKAAKQYNIPKWYKHIDDMLSGSKFDLMLTLTDMQVHGELNRKALMA
EEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCHHHHHH
GRNVWSEKPLANSYKEGKELYDLATSKGLRIWGAPAVVNSPQFAFMAEQINKGTLGNLAC
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCHHHHHHHHCCCCCCCEEE
AHGHYGHEGPSWSAFFYEPLGGSMPDLGVYNIATLTGLLGPAKSVVAMTTIVTPERTVDD
ECCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHEEEEEEECCCCCCCC
KGKIKVREEDNAMIIMEHEKGVLSHIECGFNYFDPYGHLGKGQEKATISLYGSHGNMHMV
CCCEEEEECCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEE
GYDWAPNGVDLSTMDHPVPQRFVPDTNGYVWQEGASDISKHMALNTEPRINVEHALHVLE
EECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHH
IIEAARKSQATGQRIQLVSKFPWPMVK
HHHHHHHHCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]