Click here to switch to the map view.

The map label for this gene is hypC [H]

Identifier: 150008426

GI number: 150008426

Start: 2157371

End: 2157604

Strand: Direct

Name: hypC [H]

Synonym: BDI_1808

Alternate gene names: 150008426

Gene position: 2157371-2157604 (Clockwise)

Preceding gene: 150008421

Following gene: 150008427

Centisome position: 44.84

GC content: 42.74

Gene sequence:

>234_bases
ATGTGTTTAGCGGTACCCGGAAAGATTATCTCAATCGATCGAAGCATCCCCGAAATGACCATGGCTAAAGTTGATTTCGG
AGGCATCCTAAAGAATATATGTATTGAATGGGTGGATGTGAAACAGGGGGATTATATCCTCGCTCACGCAGGGATCGCTA
TATCTGTTGTAGATGAGAAAGAAGCGGAGGAAACACTGAAAGACCTTAAAGAATTACAAAAGTGCGTTTCGTAG

Upstream 100 bases:

>100_bases
GAGATATTACCTATCATCTTATAAATAATATTTATCAATTTTATCTTTCCCTCTTAAACATATTAAGTATCTTTGAGGTT
ACTAAATAAATTGAAACGAT

Downstream 100 bases:

>100_bases
ACGAATATAGAAGCAACGAGAAGGTACAAACTCTTCTGGAGGCCATCCGCAAAAAGGTGACACGACCTTGGTATATCATG
GAGATTTGTGGCGGGCAAAC

Product: hydrogenase expression/formation protein HypC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MCLAVPGKIISIDRSIPEMTMAKVDFGGILKNICIEWVDVKQGDYILAHAGIAISVVDEKEAEETLKDLKELQKCVS

Sequences:

>Translated_77_residues
MCLAVPGKIISIDRSIPEMTMAKVDFGGILKNICIEWVDVKQGDYILAHAGIAISVVDEKEAEETLKDLKELQKCVS
>Mature_77_residues
MCLAVPGKIISIDRSIPEMTMAKVDFGGILKNICIEWVDVKQGDYILAHAGIAISVVDEKEAEETLKDLKELQKCVS

Specific function: Is Required For The Formation Of All Three Hydrogenase Isoenzymes. May Bind To The Precursor Form Of The Large Subunit Of Dehydrogenases To Keep Them In A Conformation Accessible For Metal Incorporation. [C]

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 8462; Mature: 8462

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS01097 HUPF_HYPC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLAVPGKIISIDRSIPEMTMAKVDFGGILKNICIEWVDVKQGDYILAHAGIAISVVDEK
CEECCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEECCH
EAEETLKDLKELQKCVS
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MCLAVPGKIISIDRSIPEMTMAKVDFGGILKNICIEWVDVKQGDYILAHAGIAISVVDEK
CEECCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEECCH
EAEETLKDLKELQKCVS
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]