Click here to switch to the map view.

The map label for this gene is pinE [C]

Identifier: 150008421

GI number: 150008421

Start: 2150967

End: 2151584

Strand: Direct

Name: pinE [C]

Synonym: BDI_1803

Alternate gene names: 150008421

Gene position: 2150967-2151584 (Clockwise)

Preceding gene: 150008413

Following gene: 150008426

Centisome position: 44.71

GC content: 44.34

Gene sequence:

>618_bases
ATGACAATTGCTTTTATCCGAACATATAACAATAAGCAAAACTCCGAGGTCCAAGAAGCTGTGATCCGGGAATTTGCAGA
ATCTCAGAAGATAGAGATCGGGAAGTGGGCTAAAGAGGTGGGAAATAGTCCTCGTGCGAACCGCAGACTGGAAAGTATTG
TCAAATCTTTAAGTCCCGGGGATGAGATACTTGTGTCCGATATATCCCGTGTGAGCCGTAAGATGATCGAGATCATCCAT
ATCATTTTGCTTTGTATAGAGCGAAAGGTAACGCTCCGTAGCGTAAGCGACGGATATGTGTTCGAGGATAATATCGACAG
TAAGACTTTGGCCTTTACCTTCGGTCTGGTCTCTGAGATCGAGCGAAAGCTGGTCTCTATCCGTACGAAGGAAGCCCTTG
CCTTGATCAGAAGTAAAGGTGTGGTGCTGGGCCGTCCGAAAGGTAGTCAACAAATGGGACGCTTGGAGCCTTATAAGGAA
CAAATCGAGAAAGACTTGAAAGACCCGAGCTTGACTTACGCTCAGATAGCGGAGAAATACAATGTATCGTTAAGTAGCTT
CAAACGCTTTCTGAAAGAGTATCTTCCCGATAAGAAAAAGAAGAAGACTAAAAAATAA

Upstream 100 bases:

>100_bases
TTTTTAAGCCAACCGAATTAAAGTGTTTCATATATTTGTCATATTTGAACTTATCGTAAGTCGATCTGTTATTAAAAGGA
GATAATTAAATATATACATT

Downstream 100 bases:

>100_bases
GAAAAGCTCCTTTCACCTCTGCTAAGTATATTAGCATTCAGTAGTGAAAGGAGCTTGTTTTTTTATTTCTCTATACGGAT
ACGGGCGTCTACAGCGAACA

Product: serine type site-specific recombinase Mpi

Products: NA

Alternate protein names: Serine Type Site-Specific Recombinase; Multiple Promoter Invertase; Resolvase; Resolvase Family Site-Specific Recombinase; Serine Site-Specific Recombinase; Site-Specific Recombinase; Resolvase Domain; DNA-Invertase; Serine Type Site-Specific Recombinase Mpi; Resolvase-Like Protein; Site-Specific Recombinase Resolvase Family; Site-Specific Recombinase/Resolvase

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MTIAFIRTYNNKQNSEVQEAVIREFAESQKIEIGKWAKEVGNSPRANRRLESIVKSLSPGDEILVSDISRVSRKMIEIIH
IILLCIERKVTLRSVSDGYVFEDNIDSKTLAFTFGLVSEIERKLVSIRTKEALALIRSKGVVLGRPKGSQQMGRLEPYKE
QIEKDLKDPSLTYAQIAEKYNVSLSSFKRFLKEYLPDKKKKKTKK

Sequences:

>Translated_205_residues
MTIAFIRTYNNKQNSEVQEAVIREFAESQKIEIGKWAKEVGNSPRANRRLESIVKSLSPGDEILVSDISRVSRKMIEIIH
IILLCIERKVTLRSVSDGYVFEDNIDSKTLAFTFGLVSEIERKLVSIRTKEALALIRSKGVVLGRPKGSQQMGRLEPYKE
QIEKDLKDPSLTYAQIAEKYNVSLSSFKRFLKEYLPDKKKKKTKK
>Mature_204_residues
TIAFIRTYNNKQNSEVQEAVIREFAESQKIEIGKWAKEVGNSPRANRRLESIVKSLSPGDEILVSDISRVSRKMIEIIHI
ILLCIERKVTLRSVSDGYVFEDNIDSKTLAFTFGLVSEIERKLVSIRTKEALALIRSKGVVLGRPKGSQQMGRLEPYKEQ
IEKDLKDPSLTYAQIAEKYNVSLSSFKRFLKEYLPDKKKKKTKK

Specific function: This Protein Catalyzes The Inversion Of An 1800-Bp E.Coli DNA Fragment, The P Region, Which Can Exist In Either Orientation. The Function Of The Inversion Is Not Yet Clear. [C]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23510; Mature: 23378

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIAFIRTYNNKQNSEVQEAVIREFAESQKIEIGKWAKEVGNSPRANRRLESIVKSLSPG
CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
DEILVSDISRVSRKMIEIIHIILLCIERKVTLRSVSDGYVFEDNIDSKTLAFTFGLVSEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHH
ERKLVSIRTKEALALIRSKGVVLGRPKGSQQMGRLEPYKEQIEKDLKDPSLTYAQIAEKY
HHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHH
NVSLSSFKRFLKEYLPDKKKKKTKK
CCCHHHHHHHHHHHCCCHHHHCCCC
>Mature Secondary Structure 
TIAFIRTYNNKQNSEVQEAVIREFAESQKIEIGKWAKEVGNSPRANRRLESIVKSLSPG
EEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
DEILVSDISRVSRKMIEIIHIILLCIERKVTLRSVSDGYVFEDNIDSKTLAFTFGLVSEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHH
ERKLVSIRTKEALALIRSKGVVLGRPKGSQQMGRLEPYKEQIEKDLKDPSLTYAQIAEKY
HHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHH
NVSLSSFKRFLKEYLPDKKKKKTKK
CCCHHHHHHHHHHHCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA