Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is 150008340

Identifier: 150008340

GI number: 150008340

Start: 2029470

End: 2029817

Strand: Reverse

Name: 150008340

Synonym: BDI_1714

Alternate gene names: NA

Gene position: 2029817-2029470 (Counterclockwise)

Preceding gene: 150008341

Following gene: 150008339

Centisome position: 42.19

GC content: 35.63

Gene sequence:

>348_bases
ATGGTAGGTGGCTTTATCGGGCTTTCCTGTATTTTACCGTTCTATTTGCGATATTTTCCTGTATCGACGATTGTTCCCGG
GCTATTAGATTTTACTTATTTATTGCTTTTAGCTTCTGTTTGTACGATTGGTTTGTATTTACTTCAGATACAAGTCTTGA
AAAAGATCTCTGCGTTCACGGTAAACTTGAGTTATAATCTGGAACCTATTTATAGCATTATCTTGGCTATGCTTCTTTTT
AGTGAGGCTAAAGAGTTGAACGCCGCTTTTTATATAGGGCTAGGGGTAATAATATTGTCTGTCATCTTACAAACACTAAG
TGTTATTCGATCAAACAAGAAGATTTAG

Upstream 100 bases:

>100_bases
CTTTCAAGGAGGTTGTTTTTAGTTTGTTGACTTTATTTGGGGTGGTACTGATTTTCCATTTCGATACTCGCTATCGTTTA
GGAATAGGTTTGGGTATTAT

Downstream 100 bases:

>100_bases
TGTAGGTAACAAAAAATCTAAAAAGTCCCACAAATCGTTGGATTTGTGGGACTTGACTGCTCATTATCTGGTTAGTTCTG
CGGAGAGAGCGGGATTCGAA

Product: putative permease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MVGGFIGLSCILPFYLRYFPVSTIVPGLLDFTYLLLLASVCTIGLYLLQIQVLKKISAFTVNLSYNLEPIYSIILAMLLF
SEAKELNAAFYIGLGVIILSVILQTLSVIRSNKKI

Sequences:

>Translated_115_residues
MVGGFIGLSCILPFYLRYFPVSTIVPGLLDFTYLLLLASVCTIGLYLLQIQVLKKISAFTVNLSYNLEPIYSIILAMLLF
SEAKELNAAFYIGLGVIILSVILQTLSVIRSNKKI
>Mature_115_residues
MVGGFIGLSCILPFYLRYFPVSTIVPGLLDFTYLLLLASVCTIGLYLLQIQVLKKISAFTVNLSYNLEPIYSIILAMLLF
SEAKELNAAFYIGLGVIILSVILQTLSVIRSNKKI

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12739; Mature: 12739

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGGFIGLSCILPFYLRYFPVSTIVPGLLDFTYLLLLASVCTIGLYLLQIQVLKKISAFT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNLSYNLEPIYSIILAMLLFSEAKELNAAFYIGLGVIILSVILQTLSVIRSNKKI
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVGGFIGLSCILPFYLRYFPVSTIVPGLLDFTYLLLLASVCTIGLYLLQIQVLKKISAFT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNLSYNLEPIYSIILAMLLFSEAKELNAAFYIGLGVIILSVILQTLSVIRSNKKI
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA