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The map label for this gene is rpe [H]

Identifier: 150008326

GI number: 150008326

Start: 2011613

End: 2012263

Strand: Reverse

Name: rpe [H]

Synonym: BDI_1695

Alternate gene names: 150008326

Gene position: 2012263-2011613 (Counterclockwise)

Preceding gene: 150008327

Following gene: 150008325

Centisome position: 41.82

GC content: 46.54

Gene sequence:

>651_bases
ATGAAGCATTTGATAGCACCTTCCCTGCTTTCCGCTAATTTTCTGGATTTGCGGAAGGAGATGGGGATGATAAATAAAAG
TGACGCCGATTGGTTGCATCTGGATATTATGGATGGGGTATTCGTGCCGAATATCTCGTTTGGTTTCCCGGTACTTAACG
CATTAAAGCCTATATGCCAGAAGCCGATGGATGTGCACTTGATGATCGTGGAGCCCCAGAAGTTTATCCCCGAAGTGGCG
GCTACGGGAGCCTATATGATGAACGTGCATTATGAGGCATGTTCCCATTTGCATCGGACGGTAGCGGCTATTAAGGAAAC
GGGCATGAAAGCGGGTGTCACCTTGAATCCGCATACGCCCATATGCTTATTGGAAGATATTATCCAAGATGTGGACATGG
TTTTATTGATGTCCGTGAATCCGGGATTTGGTGGTCAACGTTTCATTGAGCATTCCGTAGATAAGGTGGCTCGTTTACGA
GAAATGATAGACCGGAAGGGATTGAGTACTATGATCGAGGTAGATGGCGGGGTGAATTTAGAGACGGGGAAGCGCTTGGT
TGACGCCGGTGCCAATGTGTTAGTCGCCGGTAACTTCGTATTCAAATCTCCAGATCCGATACAAACAATTAAAGACTTGA
AAGCTTTGTAG

Upstream 100 bases:

>100_bases
CTGCGGGTATGTGTTGAACTAAGAATTACGGAAAGAGAATCTATATTATTAGGTTCTCTTTCTTTTTTTGTGTACTTTTG
TAAAAACAAAAGACAAGATT

Downstream 100 bases:

>100_bases
AACACATTAATATATCACAAAACCTAACTATCATGATTGAGGAAATACAAAAGCGGCCTTTTGTACGGCCGCTTTTTTTA
TGGATAACCGGAATTTTATG

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MKHLIAPSLLSANFLDLRKEMGMINKSDADWLHLDIMDGVFVPNISFGFPVLNALKPICQKPMDVHLMIVEPQKFIPEVA
ATGAYMMNVHYEACSHLHRTVAAIKETGMKAGVTLNPHTPICLLEDIIQDVDMVLLMSVNPGFGGQRFIEHSVDKVARLR
EMIDRKGLSTMIEVDGGVNLETGKRLVDAGANVLVAGNFVFKSPDPIQTIKDLKAL

Sequences:

>Translated_216_residues
MKHLIAPSLLSANFLDLRKEMGMINKSDADWLHLDIMDGVFVPNISFGFPVLNALKPICQKPMDVHLMIVEPQKFIPEVA
ATGAYMMNVHYEACSHLHRTVAAIKETGMKAGVTLNPHTPICLLEDIIQDVDMVLLMSVNPGFGGQRFIEHSVDKVARLR
EMIDRKGLSTMIEVDGGVNLETGKRLVDAGANVLVAGNFVFKSPDPIQTIKDLKAL
>Mature_216_residues
MKHLIAPSLLSANFLDLRKEMGMINKSDADWLHLDIMDGVFVPNISFGFPVLNALKPICQKPMDVHLMIVEPQKFIPEVA
ATGAYMMNVHYEACSHLHRTVAAIKETGMKAGVTLNPHTPICLLEDIIQDVDMVLLMSVNPGFGGQRFIEHSVDKVARLR
EMIDRKGLSTMIEVDGGVNLETGKRLVDAGANVLVAGNFVFKSPDPIQTIKDLKAL

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=212, Percent_Identity=40.0943396226415, Blast_Score=154, Evalue=7e-38,
Organism=Homo sapiens, GI219879828, Length=212, Percent_Identity=38.2075471698113, Blast_Score=143, Evalue=1e-34,
Organism=Homo sapiens, GI24307923, Length=168, Percent_Identity=32.7380952380952, Blast_Score=94, Evalue=8e-20,
Organism=Escherichia coli, GI1789788, Length=215, Percent_Identity=41.3953488372093, Blast_Score=179, Evalue=9e-47,
Organism=Escherichia coli, GI1790523, Length=195, Percent_Identity=38.4615384615385, Blast_Score=150, Evalue=7e-38,
Organism=Escherichia coli, GI1790754, Length=213, Percent_Identity=31.924882629108, Blast_Score=107, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI17552948, Length=210, Percent_Identity=37.1428571428571, Blast_Score=142, Evalue=2e-34,
Organism=Saccharomyces cerevisiae, GI6322341, Length=227, Percent_Identity=38.3259911894273, Blast_Score=154, Evalue=1e-38,
Organism=Drosophila melanogaster, GI24586301, Length=211, Percent_Identity=38.3886255924171, Blast_Score=143, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23801; Mature: 23801

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHLIAPSLLSANFLDLRKEMGMINKSDADWLHLDIMDGVFVPNISFGFPVLNALKPICQ
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEECCCCCCCHHHHHHHHHHHC
KPMDVHLMIVEPQKFIPEVAATGAYMMNVHYEACSHLHRTVAAIKETGMKAGVTLNPHTP
CCCCEEEEEECCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEECCCCC
ICLLEDIIQDVDMVLLMSVNPGFGGQRFIEHSVDKVARLREMIDRKGLSTMIEVDGGVNL
HHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCH
ETGKRLVDAGANVLVAGNFVFKSPDPIQTIKDLKAL
HHHHHHHHCCCCEEEECCEEECCCCHHHHHHHHHCC
>Mature Secondary Structure
MKHLIAPSLLSANFLDLRKEMGMINKSDADWLHLDIMDGVFVPNISFGFPVLNALKPICQ
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEECCCCCCCHHHHHHHHHHHC
KPMDVHLMIVEPQKFIPEVAATGAYMMNVHYEACSHLHRTVAAIKETGMKAGVTLNPHTP
CCCCEEEEEECCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEECCCCC
ICLLEDIIQDVDMVLLMSVNPGFGGQRFIEHSVDKVARLREMIDRKGLSTMIEVDGGVNL
HHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCH
ETGKRLVDAGANVLVAGNFVFKSPDPIQTIKDLKAL
HHHHHHHHCCCCEEEECCEEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]