| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008320
Identifier: 150008320
GI number: 150008320
Start: 2003895
End: 2005277
Strand: Reverse
Name: 150008320
Synonym: BDI_1689
Alternate gene names: NA
Gene position: 2005277-2003895 (Counterclockwise)
Preceding gene: 150008321
Following gene: 150008317
Centisome position: 41.68
GC content: 46.93
Gene sequence:
>1383_bases ATGAAGATTAAATTAATGATCGCTGCCGTGATTGCCTGTTTGGTGTTCACGGGATTTACGAAAGAGAACGTATCCGATAC GGTCGATCACAACGCATGGAAGACAACCGGCGTCGTAGTCATACAAAATGATGTCCTTACGTTGGCCGGTTCCAACGCCC GTGCCTTGTTGAACGATGGCAAAGGCTATACGAACTTCGAGTTAGATATGGATGTACGTACCACGACCGGTGGCAAAGGT TATATTGGTATCCATACAGACGCTACGGATCGTAAAGGATACCGTATCGCCTTGAACAACGATCGGGAAGATCCGGTTTG GTGGCGGATGACGGGTAGCTTGGTGTCGGTCCGGAACCTGACGAAGAGTTTCGTGAAAGAGAACGAATGGTTCAAGATGA ATATCCGGGTAGAAGGACGGCTTATCCGGGTGCGGATTAATGGTGAGACTGTCGTAGAATATATAGAGCCTTCCAAACCT TTCCGTTTGAAGGAGAACGCTAAAGCATTGTTATCCCAAGGTACTATCTCGCTGGTAGGTACGGGACGTGGAAATCTTCA GTTTAAGAATATCTCGTTAGAGGCGTTCAGCGCGAAAGGAATAGACATTCCCGCTCAATGGGCGAATGCCGTGGATGAGC AGACGGACGAGATTATTCGTTTGCACCAAGAGGACTTCCCCGTGCTTGATTATCATGTTCATTTAAAAGGTGGATTGACG AAGGAAGTAGCCGCACGGCAGTCACGCCAGACGGGTGTTAATTATGGCTTGGCTATCAATTGTGGCATCGGCTTCTCGAT CACGAACGATACGGAGTTGTATAATTATCTGGATACCATGCGTACCCAACCCTTTATCTTGGCTATGCAAGCGGAAGGAC GTGAGTGGGTAACAACCTTTTCGGAGGCGGCCCGCAACAGCTTTGACTATGTGTTTACCGATGCCATGACGTTTCTGGAT CATAAGGGGCGGCGTACGCACCTATGGGTAAACAAGGAAGTGATTATCGATGATGAGCAAGCATATATGGATATGATGTT GGACCGTATCTGTTCTGTCTTGGAAGAGCCGGTCGATATGTACGTGAATTCCTGTTTCCTTCCCGATGCGATGAGTGACC GATATGATATGTTTTGGACAGAAGAGCGTATCGACCGTTTCGTGAATGCCTTGGCAAAAAGTGGAAAGGCTTTGGAGATA AACGAGCTTTATCATATTCCGAATAAAGCGATCATTCAGAAAGCGAAAGCCGCGGGTGTAAAGTTCACGTTCGGTTCCAA CAATATCACGCCGGAGGTAGGAACGCTCGATTATTGTATCCGTATGAAAAAGGAATGCGGTTTGACAGCGCAAGATATGT ATAAACCACACATTAATATATAA
Upstream 100 bases:
>100_bases AATAGGATAGCGGATCGTACTGTCTACATTTTTATATCAATCTTCTTTTTGCTTCTTATTCCCGGATACATTTGCGGCAT AACTTTTAAAAAGAGATGCC
Downstream 100 bases:
>100_bases GATTAGTTTTAAGGTCTGAACAAACATTAGATTTAAGGTAGAGGTATTAGTGCTTTAGGCAAAGATTGTTAGGTTTCGAG GTAAGATACATATGGGGTTA
Product: putative secreted glycosylhydrolase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MKIKLMIAAVIACLVFTGFTKENVSDTVDHNAWKTTGVVVIQNDVLTLAGSNARALLNDGKGYTNFELDMDVRTTTGGKG YIGIHTDATDRKGYRIALNNDREDPVWWRMTGSLVSVRNLTKSFVKENEWFKMNIRVEGRLIRVRINGETVVEYIEPSKP FRLKENAKALLSQGTISLVGTGRGNLQFKNISLEAFSAKGIDIPAQWANAVDEQTDEIIRLHQEDFPVLDYHVHLKGGLT KEVAARQSRQTGVNYGLAINCGIGFSITNDTELYNYLDTMRTQPFILAMQAEGREWVTTFSEAARNSFDYVFTDAMTFLD HKGRRTHLWVNKEVIIDDEQAYMDMMLDRICSVLEEPVDMYVNSCFLPDAMSDRYDMFWTEERIDRFVNALAKSGKALEI NELYHIPNKAIIQKAKAAGVKFTFGSNNITPEVGTLDYCIRMKKECGLTAQDMYKPHINI
Sequences:
>Translated_460_residues MKIKLMIAAVIACLVFTGFTKENVSDTVDHNAWKTTGVVVIQNDVLTLAGSNARALLNDGKGYTNFELDMDVRTTTGGKG YIGIHTDATDRKGYRIALNNDREDPVWWRMTGSLVSVRNLTKSFVKENEWFKMNIRVEGRLIRVRINGETVVEYIEPSKP FRLKENAKALLSQGTISLVGTGRGNLQFKNISLEAFSAKGIDIPAQWANAVDEQTDEIIRLHQEDFPVLDYHVHLKGGLT KEVAARQSRQTGVNYGLAINCGIGFSITNDTELYNYLDTMRTQPFILAMQAEGREWVTTFSEAARNSFDYVFTDAMTFLD HKGRRTHLWVNKEVIIDDEQAYMDMMLDRICSVLEEPVDMYVNSCFLPDAMSDRYDMFWTEERIDRFVNALAKSGKALEI NELYHIPNKAIIQKAKAAGVKFTFGSNNITPEVGTLDYCIRMKKECGLTAQDMYKPHINI >Mature_460_residues MKIKLMIAAVIACLVFTGFTKENVSDTVDHNAWKTTGVVVIQNDVLTLAGSNARALLNDGKGYTNFELDMDVRTTTGGKG YIGIHTDATDRKGYRIALNNDREDPVWWRMTGSLVSVRNLTKSFVKENEWFKMNIRVEGRLIRVRINGETVVEYIEPSKP FRLKENAKALLSQGTISLVGTGRGNLQFKNISLEAFSAKGIDIPAQWANAVDEQTDEIIRLHQEDFPVLDYHVHLKGGLT KEVAARQSRQTGVNYGLAINCGIGFSITNDTELYNYLDTMRTQPFILAMQAEGREWVTTFSEAARNSFDYVFTDAMTFLD HKGRRTHLWVNKEVIIDDEQAYMDMMLDRICSVLEEPVDMYVNSCFLPDAMSDRYDMFWTEERIDRFVNALAKSGKALEI NELYHIPNKAIIQKAKAAGVKFTFGSNNITPEVGTLDYCIRMKKECGLTAQDMYKPHINI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52100; Mature: 52100
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKLMIAAVIACLVFTGFTKENVSDTVDHNAWKTTGVVVIQNDVLTLAGSNARALLNDG CEEEEHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEEEEEEECCEEEEECCCCEEEEECC KGYTNFELDMDVRTTTGGKGYIGIHTDATDRKGYRIALNNDREDPVWWRMTGSLVSVRNL CCCEEEEEEEEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCCEEEEEECCHHHHHHH TKSFVKENEWFKMNIRVEGRLIRVRINGETVVEYIEPSKPFRLKENAKALLSQGTISLVG HHHHHCCCCEEEEEEEEEEEEEEEEECCCEEEEEECCCCCEEECHHHHHHHCCCCEEEEE TGRGNLQFKNISLEAFSAKGIDIPAQWANAVDEQTDEIIRLHQEDFPVLDYHVHLKGGLT CCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC KEVAARQSRQTGVNYGLAINCGIGFSITNDTELYNYLDTMRTQPFILAMQAEGREWVTTF HHHHHHHHHHCCCCCCEEEECCCCEEECCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHH SEAARNSFDYVFTDAMTFLDHKGRRTHLWVNKEVIIDDEQAYMDMMLDRICSVLEEPVDM HHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHH YVNSCFLPDAMSDRYDMFWTEERIDRFVNALAKSGKALEINELYHIPNKAIIQKAKAAGV HHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCEEEEHHEEECCCHHHHHHHHHCCE KFTFGSNNITPEVGTLDYCIRMKKECGLTAQDMYKPHINI EEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCC >Mature Secondary Structure MKIKLMIAAVIACLVFTGFTKENVSDTVDHNAWKTTGVVVIQNDVLTLAGSNARALLNDG CEEEEHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEEEEEEECCEEEEECCCCEEEEECC KGYTNFELDMDVRTTTGGKGYIGIHTDATDRKGYRIALNNDREDPVWWRMTGSLVSVRNL CCCEEEEEEEEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCCEEEEEECCHHHHHHH TKSFVKENEWFKMNIRVEGRLIRVRINGETVVEYIEPSKPFRLKENAKALLSQGTISLVG HHHHHCCCCEEEEEEEEEEEEEEEEECCCEEEEEECCCCCEEECHHHHHHHCCCCEEEEE TGRGNLQFKNISLEAFSAKGIDIPAQWANAVDEQTDEIIRLHQEDFPVLDYHVHLKGGLT CCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC KEVAARQSRQTGVNYGLAINCGIGFSITNDTELYNYLDTMRTQPFILAMQAEGREWVTTF HHHHHHHHHHCCCCCCEEEECCCCEEECCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHH SEAARNSFDYVFTDAMTFLDHKGRRTHLWVNKEVIIDDEQAYMDMMLDRICSVLEEPVDM HHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHH YVNSCFLPDAMSDRYDMFWTEERIDRFVNALAKSGKALEINELYHIPNKAIIQKAKAAGV HHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCEEEEHHEEECCCHHHHHHHHHCCE KFTFGSNNITPEVGTLDYCIRMKKECGLTAQDMYKPHINI EEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA