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The map label for this gene is idi [H]

Identifier: 150008319

GI number: 150008319

Start: 2003060

End: 2003551

Strand: Direct

Name: idi [H]

Synonym: BDI_1688

Alternate gene names: 150008319

Gene position: 2003060-2003551 (Clockwise)

Preceding gene: 150008318

Following gene: 150008330

Centisome position: 41.63

GC content: 47.36

Gene sequence:

>492_bases
ATGAGAACAGAATGGTTTCCTCTGGTAAACGAGGAGGGTGAGACGATCGGAAAGGCTACTCGCAAGGAATGTCATAGCGG
AAGTAAGTTGCTACATCCCGTAATCCATTTACATATCTTTAATAAGGATGGAGATCTATATCTCCAAAAACGTTCCATGA
ACAAGGATATACAACCGGGAAAGTGGGACACGGCCGTAGGTGGGCATATTGATTATGGAGAAAGCGTGGAAGAGGCCCTG
CGCCGTGAGGTTCGTGAGGAATTGGGCATTACTGATTTTACGCCTGTCTTCATCAAACGTTATATATTCGAGTCTTCCAT
AGAGAAGGAATTGGTAAACAGCTTCCGGACCACTTACGATGGCCCCATCACCCCCGATCCCGAGGAACTGGACGGAGGAC
GTTTCTGGCCGATCGAGGAGATCAAAGAGAATCTGGGGAAAGGCGCATTCACCCCGAATTTCGAAAAGGAATTCACCGCT
ATTTTCCTATAG

Upstream 100 bases:

>100_bases
GAATGGATGTACGTTCCGCTTGGATTACGCTACGTATGGAAATAATTTAACGGATGAGGAGTTAGGTACGGTTATCAGTA
AATTAAAGTCTATTTAAAAT

Downstream 100 bases:

>100_bases
GATAAAAACGCTACACTTCAGCTAGAATAGTTATTCAAGAGCCTGTTCATTCTTCGTAAGATACTGTTACATTCCACAAA
CCACGGCGTGAACTGTACAG

Product: putative NTP pyrophosphohydrolase

Products: NA

Alternate protein names: IPP isomerase; IPP:DMAPP isomerase; Isopentenyl pyrophosphate isomerase [H]

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MRTEWFPLVNEEGETIGKATRKECHSGSKLLHPVIHLHIFNKDGDLYLQKRSMNKDIQPGKWDTAVGGHIDYGESVEEAL
RREVREELGITDFTPVFIKRYIFESSIEKELVNSFRTTYDGPITPDPEELDGGRFWPIEEIKENLGKGAFTPNFEKEFTA
IFL

Sequences:

>Translated_163_residues
MRTEWFPLVNEEGETIGKATRKECHSGSKLLHPVIHLHIFNKDGDLYLQKRSMNKDIQPGKWDTAVGGHIDYGESVEEAL
RREVREELGITDFTPVFIKRYIFESSIEKELVNSFRTTYDGPITPDPEELDGGRFWPIEEIKENLGKGAFTPNFEKEFTA
IFL
>Mature_163_residues
MRTEWFPLVNEEGETIGKATRKECHSGSKLLHPVIHLHIFNKDGDLYLQKRSMNKDIQPGKWDTAVGGHIDYGESVEEAL
RREVREELGITDFTPVFIKRYIFESSIEKELVNSFRTTYDGPITPDPEELDGGRFWPIEEIKENLGKGAFTPNFEKEFTA
IFL

Specific function: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP) [H]

COG id: COG1443

COG function: function code I; Isopentenyldiphosphate isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1789255, Length=95, Percent_Identity=35.7894736842105, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011876
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =5.3.3.2 [H]

Molecular weight: Translated: 18804; Mature: 18804

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTEWFPLVNEEGETIGKATRKECHSGSKLLHPVIHLHIFNKDGDLYLQKRSMNKDIQPG
CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHEEEEECCCCCEEEEECCCCCCCCCC
KWDTAVGGHIDYGESVEEALRREVREELGITDFTPVFIKRYIFESSIEKELVNSFRTTYD
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
GPITPDPEELDGGRFWPIEEIKENLGKGAFTPNFEKEFTAIFL
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHEECC
>Mature Secondary Structure
MRTEWFPLVNEEGETIGKATRKECHSGSKLLHPVIHLHIFNKDGDLYLQKRSMNKDIQPG
CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHEEEEECCCCCEEEEECCCCCCCCCC
KWDTAVGGHIDYGESVEEALRREVREELGITDFTPVFIKRYIFESSIEKELVNSFRTTYD
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
GPITPDPEELDGGRFWPIEEIKENLGKGAFTPNFEKEFTAIFL
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA