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The map label for this gene is ypdP [H]

Identifier: 150008274

GI number: 150008274

Start: 1940713

End: 1941393

Strand: Direct

Name: ypdP [H]

Synonym: BDI_1643

Alternate gene names: 150008274

Gene position: 1940713-1941393 (Clockwise)

Preceding gene: 150008273

Following gene: 150008289

Centisome position: 40.34

GC content: 46.7

Gene sequence:

>681_bases
ATGCAAAAAACAGTTACAGTACCTTTCATGCTGCTAGGTATACTTTTTAATATATGCCTTGTAGCGTCCAATCTTTTAGA
GACAAAAGTAGTGCAAGTAGGCGGTATAACGGCTACCGCAGGTTTGATCGTATTCCCGATCTCGTATATCATCAATGATT
GTATAGCGGAAGTGTGGGGATTCAAGAAGGCACGGCTAATTATCTGGAGTGGCTTCGCCTCTAATTTCCTAGTGATCGCT
TTCGCGCAATTGGCGGTATTATTACCGGCCGCCCCTTTCTGGGAGGGGGAGGAAGGTTTCAATTTCGTCTTCGGGATGGC
CCCACGTATAGCGGTCGCCAGCTTGATAGCGTTTTTGGCCGGTTCTTTCCTGAACGCCTATGTGATGAGCAAAATGAAAA
TCGCCTCCAACGGAAAGAATTTCTCGTTACGAGCGATCGTATCTACCCTTATCGGTGAGAGCGCCGATTCCCTGATCTTT
TTCCCGATCGCCTTCGCCGGATTGATCCCGGCCGGAGAATTGCTTATCATGATCGGGACGCAGGCGGTACTTAAATCCTT
GTACGAGGTTATCATCCTTCCCGTCACCATCCGTGTCGTAAAGTACATCAAGAAAGTAGACGGGAATGATGTGTATGATC
TTGGTACCTCGTATAATATCCTAAAGGTTAAAGACATTTAG

Upstream 100 bases:

>100_bases
CGCCATGCGATCGGTATCTGCTATACCCATCGTTTTTAATAAGAATTTTCGTACCTTCGCGTCCCGAGTGCTTGATAAAC
CTCGTTAAAAACAAGAAGAC

Downstream 100 bases:

>100_bases
GCCGGGACCAAACAATGACCGGCCTTCATTTGAATAGATGCGACCAATCCTCCCTTTGCTGCGGCATATAGGACTTCATT
CCCAATAATTCAGCCGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MQKTVTVPFMLLGILFNICLVASNLLETKVVQVGGITATAGLIVFPISYIINDCIAEVWGFKKARLIIWSGFASNFLVIA
FAQLAVLLPAAPFWEGEEGFNFVFGMAPRIAVASLIAFLAGSFLNAYVMSKMKIASNGKNFSLRAIVSTLIGESADSLIF
FPIAFAGLIPAGELLIMIGTQAVLKSLYEVIILPVTIRVVKYIKKVDGNDVYDLGTSYNILKVKDI

Sequences:

>Translated_226_residues
MQKTVTVPFMLLGILFNICLVASNLLETKVVQVGGITATAGLIVFPISYIINDCIAEVWGFKKARLIIWSGFASNFLVIA
FAQLAVLLPAAPFWEGEEGFNFVFGMAPRIAVASLIAFLAGSFLNAYVMSKMKIASNGKNFSLRAIVSTLIGESADSLIF
FPIAFAGLIPAGELLIMIGTQAVLKSLYEVIILPVTIRVVKYIKKVDGNDVYDLGTSYNILKVKDI
>Mature_226_residues
MQKTVTVPFMLLGILFNICLVASNLLETKVVQVGGITATAGLIVFPISYIINDCIAEVWGFKKARLIIWSGFASNFLVIA
FAQLAVLLPAAPFWEGEEGFNFVFGMAPRIAVASLIAFLAGSFLNAYVMSKMKIASNGKNFSLRAIVSTLIGESADSLIF
FPIAFAGLIPAGELLIMIGTQAVLKSLYEVIILPVTIRVVKYIKKVDGNDVYDLGTSYNILKVKDI

Specific function: Unknown

COG id: COG1738

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003744 [H]

Pfam domain/function: PF02592 DUF165 [H]

EC number: NA

Molecular weight: Translated: 24480; Mature: 24480

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKTVTVPFMLLGILFNICLVASNLLETKVVQVGGITATAGLIVFPISYIINDCIAEVWG
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
FKKARLIIWSGFASNFLVIAFAQLAVLLPAAPFWEGEEGFNFVFGMAPRIAVASLIAFLA
CCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHH
GSFLNAYVMSKMKIASNGKNFSLRAIVSTLIGESADSLIFFPIAFAGLIPAGELLIMIGT
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCEEEEECC
QAVLKSLYEVIILPVTIRVVKYIKKVDGNDVYDLGTSYNILKVKDI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEECC
>Mature Secondary Structure
MQKTVTVPFMLLGILFNICLVASNLLETKVVQVGGITATAGLIVFPISYIINDCIAEVWG
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
FKKARLIIWSGFASNFLVIAFAQLAVLLPAAPFWEGEEGFNFVFGMAPRIAVASLIAFLA
CCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHH
GSFLNAYVMSKMKIASNGKNFSLRAIVSTLIGESADSLIFFPIAFAGLIPAGELLIMIGT
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCEEEEECC
QAVLKSLYEVIILPVTIRVVKYIKKVDGNDVYDLGTSYNILKVKDI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]