| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008273
Identifier: 150008273
GI number: 150008273
Start: 1939989
End: 1940651
Strand: Direct
Name: 150008273
Synonym: BDI_1642
Alternate gene names: NA
Gene position: 1939989-1940651 (Clockwise)
Preceding gene: 150008263
Following gene: 150008274
Centisome position: 40.32
GC content: 42.99
Gene sequence:
>663_bases ATGAAAAACACATCATATACAAAACGATCTATTTATCTGATCCTATTCTTTATAATAGGATGCACTTCATCCCTATACGG AATGGAAGGCGCAGGTGTGTATTTCAAGGCGAGCCTATGCGGAAAAATCTATAAGCATTTTTCCTTTCTTGTAGAAGAGG ACATCCGTCCGAGAGATGACTTTAAGGAAGCGGAATGGTTCCTCACCACCGTTGAGGTAAACTACAAGTTTAATAAATAT CTTCTGGCAGGAAGCGGATATATGTCTCTAGCACGATACAAGGCATCCGACGAGTTACGAAACCGATATTATCTCTACGC TACGGGGACTTATTCGGCCGGACGTTTTACCCTCTCTGTCCGGGAACGTTTTCAAAGTACCTATAAGGTTCACGCCGAAC ATCCCAAGAATTATCTGCGTTCGATGCTGACCCTCTCCTATAAGATCCGCAAGAGTGGTTTCTGTCCTTTTGCCTACACC GAGGTCTTCAATGATACGCGAAATAAGATGCGGTCCGATAAGATCCGTTTCTCCACAGGAAGTAATTACCAACTAAACCC GAACAATAACCTCCAACTCTATTATCGCTACCATATATTTAATGTAGACGATCCCGTGAATTACCGCCATGCGATCGGTA TCTGCTATACCCATCGTTTTTAA
Upstream 100 bases:
>100_bases ATAGTTAATAGGAGACAAATATAAGAAAAATCGGATATAATATCCTGAGGCGTTGGTATTACATCCAAAAACACTACTTT TGCATCGGAAGTCACTCTAC
Downstream 100 bases:
>100_bases TAAGAATTTTCGTACCTTCGCGTCCCGAGTGCTTGATAAACCTCGTTAAAAACAAGAAGACATGCAAAAAACAGTTACAG TACCTTTCATGCTGCTAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MKNTSYTKRSIYLILFFIIGCTSSLYGMEGAGVYFKASLCGKIYKHFSFLVEEDIRPRDDFKEAEWFLTTVEVNYKFNKY LLAGSGYMSLARYKASDELRNRYYLYATGTYSAGRFTLSVRERFQSTYKVHAEHPKNYLRSMLTLSYKIRKSGFCPFAYT EVFNDTRNKMRSDKIRFSTGSNYQLNPNNNLQLYYRYHIFNVDDPVNYRHAIGICYTHRF
Sequences:
>Translated_220_residues MKNTSYTKRSIYLILFFIIGCTSSLYGMEGAGVYFKASLCGKIYKHFSFLVEEDIRPRDDFKEAEWFLTTVEVNYKFNKY LLAGSGYMSLARYKASDELRNRYYLYATGTYSAGRFTLSVRERFQSTYKVHAEHPKNYLRSMLTLSYKIRKSGFCPFAYT EVFNDTRNKMRSDKIRFSTGSNYQLNPNNNLQLYYRYHIFNVDDPVNYRHAIGICYTHRF >Mature_220_residues MKNTSYTKRSIYLILFFIIGCTSSLYGMEGAGVYFKASLCGKIYKHFSFLVEEDIRPRDDFKEAEWFLTTVEVNYKFNKY LLAGSGYMSLARYKASDELRNRYYLYATGTYSAGRFTLSVRERFQSTYKVHAEHPKNYLRSMLTLSYKIRKSGFCPFAYT EVFNDTRNKMRSDKIRFSTGSNYQLNPNNNLQLYYRYHIFNVDDPVNYRHAIGICYTHRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26084; Mature: 26084
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTSYTKRSIYLILFFIIGCTSSLYGMEGAGVYFKASLCGKIYKHFSFLVEEDIRPRDD CCCCCCHHHHHHHHHHHHHHHCHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCC FKEAEWFLTTVEVNYKFNKYLLAGSGYMSLARYKASDELRNRYYLYATGTYSAGRFTLSV CCCCEEEEEEEEEEEEEEEEEEECCCHHHHHHHCCCHHHCCEEEEEEECCCCCCEEEEHH RERFQSTYKVHAEHPKNYLRSMLTLSYKIRKSGFCPFAYTEVFNDTRNKMRSDKIRFSTG HHHHHHHEEEECCCHHHHHHHHHHHHHEEHHCCCCCHHHHHHHHHHHHHHHCCCEEEECC SNYQLNPNNNLQLYYRYHIFNVDDPVNYRHAIGICYTHRF CCEEECCCCCEEEEEEEEEEECCCCCCCHHEEEEEEEECC >Mature Secondary Structure MKNTSYTKRSIYLILFFIIGCTSSLYGMEGAGVYFKASLCGKIYKHFSFLVEEDIRPRDD CCCCCCHHHHHHHHHHHHHHHCHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCC FKEAEWFLTTVEVNYKFNKYLLAGSGYMSLARYKASDELRNRYYLYATGTYSAGRFTLSV CCCCEEEEEEEEEEEEEEEEEEECCCHHHHHHHCCCHHHCCEEEEEEECCCCCCEEEEHH RERFQSTYKVHAEHPKNYLRSMLTLSYKIRKSGFCPFAYTEVFNDTRNKMRSDKIRFSTG HHHHHHHEEEECCCHHHHHHHHHHHHHEEHHCCCCCHHHHHHHHHHHHHHHCCCEEEECC SNYQLNPNNNLQLYYRYHIFNVDDPVNYRHAIGICYTHRF CCEEECCCCCEEEEEEEEEEECCCCCCCHHEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA