| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is mpi [H]
Identifier: 150008208
GI number: 150008208
Start: 1845349
End: 1845978
Strand: Direct
Name: mpi [H]
Synonym: BDI_1574
Alternate gene names: 150008208
Gene position: 1845349-1845978 (Clockwise)
Preceding gene: 150008205
Following gene: 150008209
Centisome position: 38.35
GC content: 41.75
Gene sequence:
>630_bases ATGGTATACGGTTATGTAAGAGTCAGTACAGACAAACAAACTACTGAAAACCAGCGATTCGAGATTGAGAAATTCACAAA ATCGAGGAACATGAGAATCGACAGGTGGGTAGATGAGACGATCAGCGGGACAAAAGTAATCGCCGATCGCCAACTTGGTA AATTATTAAAGCAAATACGTAAAGGCGACATCCTGATCACGACGGAACTGTCACGTCTCGGACGTAATCTTATGCAAGTT ATGAGCTTCCTTCATCAATGTATGGAAAGAGACATCATTGTATTTACGGTAAAGGAAGGTTACGAACTCGGAAATAACAT TAACAGTAAAATCTTGGCATTCGCATTTAGCCTAAGCGCCGAAATTGAACGCAACCTGATTTCGCAACGAACGAAAGAAG CGTTGGCTCGGAAAAAAGTGCAAGGTGCCAAACTGGGCCGTCCAAAAGGAGAGCGACCGGAAGCCTGTAAGCTAAAAGGT AAGGAAGAGATGATCTTGCAGTATATTAAAGAACATAAGACTAAAGTATATATCAGCAAGAAACTGGGAGTAAACCGGCA AACCTTGAGGGAATTTCTCAAGACTCATCCGGAAATTCCACGGAAATGGAAAAGAATACAGAAGGATTAA
Upstream 100 bases:
>100_bases TTCTTTAACACACCCATAAAAAAGTTTGTTTTTACTAAAACACACTATCAATCAATCCGTTTCCAGTATCTTGGTTGTTG TTTAATTAAATATAGGACAT
Downstream 100 bases:
>100_bases CAACTCAAGCAATAATTAACGTATGTTAAATTAGTTTAGTTTAGCAGACTTATCGCTCGTTTATTTGTTTATTCCCATTA ACTTGCGGAGGAATAAGATA
Product: multiple promoter invertase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MVYGYVRVSTDKQTTENQRFEIEKFTKSRNMRIDRWVDETISGTKVIADRQLGKLLKQIRKGDILITTELSRLGRNLMQV MSFLHQCMERDIIVFTVKEGYELGNNINSKILAFAFSLSAEIERNLISQRTKEALARKKVQGAKLGRPKGERPEACKLKG KEEMILQYIKEHKTKVYISKKLGVNRQTLREFLKTHPEIPRKWKRIQKD
Sequences:
>Translated_209_residues MVYGYVRVSTDKQTTENQRFEIEKFTKSRNMRIDRWVDETISGTKVIADRQLGKLLKQIRKGDILITTELSRLGRNLMQV MSFLHQCMERDIIVFTVKEGYELGNNINSKILAFAFSLSAEIERNLISQRTKEALARKKVQGAKLGRPKGERPEACKLKG KEEMILQYIKEHKTKVYISKKLGVNRQTLREFLKTHPEIPRKWKRIQKD >Mature_209_residues MVYGYVRVSTDKQTTENQRFEIEKFTKSRNMRIDRWVDETISGTKVIADRQLGKLLKQIRKGDILITTELSRLGRNLMQV MSFLHQCMERDIIVFTVKEGYELGNNINSKILAFAFSLSAEIERNLISQRTKEALARKKVQGAKLGRPKGERPEACKLKG KEEMILQYIKEHKTKVYISKKLGVNRQTLREFLKTHPEIPRKWKRIQKD
Specific function: Resolvase catalyzes the resolution (a site-specific recombination) of the cointegrated replicon to yield the final transposition products [H]
COG id: COG1961
COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the site-specific recombinase resolvase family [H]
Homologues:
Organism=Escherichia coli, GI1787638, Length=189, Percent_Identity=30.6878306878307, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1787827, Length=189, Percent_Identity=30.6878306878307, Blast_Score=84, Evalue=6e-18, Organism=Escherichia coli, GI1787404, Length=186, Percent_Identity=30.1075268817204, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR006118 - InterPro: IPR006119 - InterPro: IPR006120 [H]
Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]
EC number: NA
Molecular weight: Translated: 24498; Mature: 24498
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: PS00397 RECOMBINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYGYVRVSTDKQTTENQRFEIEKFTKSRNMRIDRWVDETISGTKVIADRQLGKLLKQIR CEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH KGDILITTELSRLGRNLMQVMSFLHQCMERDIIVFTVKEGYELGNNINSKILAFAFSLSA CCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHCCCCHHHHHHHHHHHHH EIERNLISQRTKEALARKKVQGAKLGRPKGERPEACKLKGKEEMILQYIKEHKTKVYISK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHEEEEHH KLGVNRQTLREFLKTHPEIPRKWKRIQKD HCCCCHHHHHHHHHHCCCCHHHHHHHCCC >Mature Secondary Structure MVYGYVRVSTDKQTTENQRFEIEKFTKSRNMRIDRWVDETISGTKVIADRQLGKLLKQIR CEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH KGDILITTELSRLGRNLMQVMSFLHQCMERDIIVFTVKEGYELGNNINSKILAFAFSLSA CCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHCCCCHHHHHHHHHHHHH EIERNLISQRTKEALARKKVQGAKLGRPKGERPEACKLKGKEEMILQYIKEHKTKVYISK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHEEEEHH KLGVNRQTLREFLKTHPEIPRKWKRIQKD HCCCCHHHHHHHHHHCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3027041 [H]