Click here to switch to the map view.

The map label for this gene is dinB [H]

Identifier: 150008205

GI number: 150008205

Start: 1838438

End: 1839523

Strand: Direct

Name: dinB [H]

Synonym: BDI_1571

Alternate gene names: 150008205

Gene position: 1838438-1839523 (Clockwise)

Preceding gene: 150008204

Following gene: 150008208

Centisome position: 38.21

GC content: 48.71

Gene sequence:

>1086_bases
TTGAGAAAGATCATACATATCGATATGGATGCCTTTTATGCCTCGGTGGAACAACGAGACAATCCGGAGTTGCGAGGAAA
ACCCCTAGCGGTCGGGCATGCGGAGCAGAGAGGCGTAGTAGCCGCCGCTAGCTACGAGGCCCGGAAATATGGGGTACGTT
CCGCCATGGCGTCTCAAAAAGCCAAACGTTTATGCCCGGACCTGATATTCGTACACGGAAGGATGGACGTATATAAATCC
GTCTCACGCCAGATCCACGAGATCTTCCACGATTATACGGATATCATAGAACCCCTTTCCTTGGATGAAGCCTTCTTGGA
TGTCACCGATAATAAACAAGGCATCTCTCTCGCTGTAGATATCGCCAAGGAGATCAAGAAACGGATCTGGGAAAACTTGA
ACCTGATAGCGTCAGCGGGAGTCTCCTACAACAAATTTCTAGCGAAAATAGCCTCGGATTATCGAAAGCCCAATGGATTA
TGCACCATCCATCCAAGCCAAGCCCTCGATTTCATAGCACGTCTTCCCATTGAGTCCTTTTGGGGAGTAGGCCCCGTAAC
AGCCCGGAAAATGCATACACTCGGTATCCACAACGGGCTGCAATTACGGGAATGTTCGGGGGAGATGCTTACCCGCCAGT
TCGGAAAGGCGGGAATACTTTATTATGAGTTTGCCAGAGGTATAGACAACCGTCCCGTAGAAGCGGTACGAATCCGGAAG
TCGGTAGGTTGCGAGCATACGCTAGAAAAAGATATCTCCCGCAAATCCTCTGTTATCATCGAGCTTTATCACGTAGCGAC
CGAACTTATCGGCAGGCTGGAACGTTCCGGATTCAAGGGAAACACACTTACCTTAAAGGTCAAGTTCCACGATTTCAACC
AAATCACGAGAAGCCTCAGCCGTCCGGAAGAGTTAACAACCTTAGATAAGATCCTTCCCTTGGCCAAGGAATTGCTGAAA
GAAGTGGAATATACCGAGCATCCCATCCGACTGATCGGCCTATCCGTATCTAATCCCGTAAAAGAGGAGCCTCATACGAA
AGACCGTTGGGAACAATTAAGTTTTGAGTTCAGCGACTGGAAATAA

Upstream 100 bases:

>100_bases
GAATATCGTCATTAACTCCGTAGAGATCTTATAATGCGGTTATCGGCTTCATAAACCGACGAAGGGGCTTATCGCGAATA
TCAGTAATAAAAGAGCTATC

Downstream 100 bases:

>100_bases
TACTTGCCCTAGAAGGATAGCTTCATCATAAAACGTATACCCTTTGTCTGGATGCCCGGATGATCCTTATAGGTCAGACG
CCATACATAATCCAAACGCA

Product: DNA damage-inducible protein

Products: NA

Alternate protein names: Pol IV [H]

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MRKIIHIDMDAFYASVEQRDNPELRGKPLAVGHAEQRGVVAAASYEARKYGVRSAMASQKAKRLCPDLIFVHGRMDVYKS
VSRQIHEIFHDYTDIIEPLSLDEAFLDVTDNKQGISLAVDIAKEIKKRIWENLNLIASAGVSYNKFLAKIASDYRKPNGL
CTIHPSQALDFIARLPIESFWGVGPVTARKMHTLGIHNGLQLRECSGEMLTRQFGKAGILYYEFARGIDNRPVEAVRIRK
SVGCEHTLEKDISRKSSVIIELYHVATELIGRLERSGFKGNTLTLKVKFHDFNQITRSLSRPEELTTLDKILPLAKELLK
EVEYTEHPIRLIGLSVSNPVKEEPHTKDRWEQLSFEFSDWK

Sequences:

>Translated_361_residues
MRKIIHIDMDAFYASVEQRDNPELRGKPLAVGHAEQRGVVAAASYEARKYGVRSAMASQKAKRLCPDLIFVHGRMDVYKS
VSRQIHEIFHDYTDIIEPLSLDEAFLDVTDNKQGISLAVDIAKEIKKRIWENLNLIASAGVSYNKFLAKIASDYRKPNGL
CTIHPSQALDFIARLPIESFWGVGPVTARKMHTLGIHNGLQLRECSGEMLTRQFGKAGILYYEFARGIDNRPVEAVRIRK
SVGCEHTLEKDISRKSSVIIELYHVATELIGRLERSGFKGNTLTLKVKFHDFNQITRSLSRPEELTTLDKILPLAKELLK
EVEYTEHPIRLIGLSVSNPVKEEPHTKDRWEQLSFEFSDWK
>Mature_361_residues
MRKIIHIDMDAFYASVEQRDNPELRGKPLAVGHAEQRGVVAAASYEARKYGVRSAMASQKAKRLCPDLIFVHGRMDVYKS
VSRQIHEIFHDYTDIIEPLSLDEAFLDVTDNKQGISLAVDIAKEIKKRIWENLNLIASAGVSYNKFLAKIASDYRKPNGL
CTIHPSQALDFIARLPIESFWGVGPVTARKMHTLGIHNGLQLRECSGEMLTRQFGKAGILYYEFARGIDNRPVEAVRIRK
SVGCEHTLEKDISRKSSVIIELYHVATELIGRLERSGFKGNTLTLKVKFHDFNQITRSLSRPEELTTLDKILPLAKELLK
EVEYTEHPIRLIGLSVSNPVKEEPHTKDRWEQLSFEFSDWK

Specific function: Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by polIV. Exhibits

COG id: COG0389

COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 umuC domain [H]

Homologues:

Organism=Homo sapiens, GI84043967, Length=338, Percent_Identity=30.7692307692308, Blast_Score=152, Evalue=7e-37,
Organism=Homo sapiens, GI7706681, Length=339, Percent_Identity=30.3834808259587, Blast_Score=146, Evalue=2e-35,
Organism=Homo sapiens, GI154350220, Length=324, Percent_Identity=29.6296296296296, Blast_Score=135, Evalue=6e-32,
Organism=Homo sapiens, GI5729982, Length=349, Percent_Identity=28.080229226361, Blast_Score=122, Evalue=7e-28,
Organism=Homo sapiens, GI7705344, Length=106, Percent_Identity=51.8867924528302, Blast_Score=119, Evalue=5e-27,
Organism=Escherichia coli, GI1786425, Length=345, Percent_Identity=45.2173913043478, Blast_Score=258, Evalue=4e-70,
Organism=Escherichia coli, GI1787432, Length=217, Percent_Identity=27.1889400921659, Blast_Score=82, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI193205700, Length=407, Percent_Identity=28.009828009828, Blast_Score=136, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17537959, Length=302, Percent_Identity=27.1523178807947, Blast_Score=110, Evalue=9e-25,
Organism=Caenorhabditis elegans, GI115534089, Length=124, Percent_Identity=41.1290322580645, Blast_Score=88, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI193205702, Length=348, Percent_Identity=25.2873563218391, Blast_Score=83, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6324921, Length=206, Percent_Identity=25.2427184466019, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI19923006, Length=339, Percent_Identity=28.6135693215339, Blast_Score=129, Evalue=3e-30,
Organism=Drosophila melanogaster, GI21355641, Length=295, Percent_Identity=28.8135593220339, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI24644984, Length=295, Percent_Identity=28.8135593220339, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI24668444, Length=118, Percent_Identity=32.2033898305085, Blast_Score=76, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017962
- InterPro:   IPR017961
- InterPro:   IPR001126
- InterPro:   IPR017963
- InterPro:   IPR022880 [H]

Pfam domain/function: PF00817 IMS [H]

EC number: =2.7.7.7 [H]

Molecular weight: Translated: 41113; Mature: 41113

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: PS50173 UMUC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIIHIDMDAFYASVEQRDNPELRGKPLAVGHAEQRGVVAAASYEARKYGVRSAMASQK
CCEEEEECHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEEECHHHHHHHHHHHHHHHH
AKRLCPDLIFVHGRMDVYKSVSRQIHEIFHDYTDIIEPLSLDEAFLDVTDNKQGISLAVD
HHHHCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHH
IAKEIKKRIWENLNLIASAGVSYNKFLAKIASDYRKPNGLCTIHPSQALDFIARLPIESF
HHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHH
WGVGPVTARKMHTLGIHNGLQLRECSGEMLTRQFGKAGILYYEFARGIDNRPVEAVRIRK
CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHH
SVGCEHTLEKDISRKSSVIIELYHVATELIGRLERSGFKGNTLTLKVKFHDFNQITRSLS
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHC
RPEELTTLDKILPLAKELLKEVEYTEHPIRLIGLSVSNPVKEEPHTKDRWEQLSFEFSDW
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCC
K
C
>Mature Secondary Structure
MRKIIHIDMDAFYASVEQRDNPELRGKPLAVGHAEQRGVVAAASYEARKYGVRSAMASQK
CCEEEEECHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEEECHHHHHHHHHHHHHHHH
AKRLCPDLIFVHGRMDVYKSVSRQIHEIFHDYTDIIEPLSLDEAFLDVTDNKQGISLAVD
HHHHCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHH
IAKEIKKRIWENLNLIASAGVSYNKFLAKIASDYRKPNGLCTIHPSQALDFIARLPIESF
HHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHH
WGVGPVTARKMHTLGIHNGLQLRECSGEMLTRQFGKAGILYYEFARGIDNRPVEAVRIRK
CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHH
SVGCEHTLEKDISRKSSVIIELYHVATELIGRLERSGFKGNTLTLKVKFHDFNQITRSLS
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHC
RPEELTTLDKILPLAKELLKEVEYTEHPIRLIGLSVSNPVKEEPHTKDRWEQLSFEFSDW
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA