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The map label for this gene is yajL [H]

Identifier: 150008183

GI number: 150008183

Start: 1812723

End: 1813268

Strand: Direct

Name: yajL [H]

Synonym: BDI_1549

Alternate gene names: 150008183

Gene position: 1812723-1813268 (Clockwise)

Preceding gene: 150008182

Following gene: 150008185

Centisome position: 37.68

GC content: 48.9

Gene sequence:

>546_bases
ATGAAGAAAGCGATCGTATTCTTAGCGAATGGCTTCGAGGAAATGGAAGCCACGGGAACCGTAGACATTTTGCGTCGCGG
AGGTATAGACACGAAAACAGTCTCCATCACAGACGACCGTAAAGTGATTGGCGCTCACAATATGGAATATACGGCTGACG
CCACATTTACCGAAATCGATCTTTCGGATGCTGATGCCTTGATCTTACCCGGAGGCATGCCCGGAGCATCCAACTTGAAC
AATTCGGAACCGGTGAAAGAAGTCTTATTACAACAATACCGTGAAGGACGTATCGTAGCGGCTATCTGCGCAGCTCCGAT
GGTATTAGGCGGTCTAGGTTTGTTAAAAGGTCGCAAAGCCACTTGCTACCCCGGGTTCGAACCGAAATTGATTGGTGCCA
CCGTAACAGGCGAGGCTGTCGAGGTAGATGGAAATGTGGTAACCGGTAGAGGACCGGGCTTGGTATTCAATTTTGGCCTA
GCTTTAGTATCTGTACTAAAAGGTGACGCAGTTGCGGAGGAAGTTGCGGCCGGATTACTATTATAA

Upstream 100 bases:

>100_bases
TTTGGACGCGGCTCGAAAGGCGAAGTTCAACAGTATCAGCGGCGCTAATAACCAGAGTGGTACTATTACTTACGTGTACA
AATTTAAATAATTGAATCTT

Downstream 100 bases:

>100_bases
GATTTAGATCATCAGTCGAAACCCAATAGAATAGGGAACGTAATCCATTGAGTTATGTTTCCTATTCCATTGAGTTTTAT
CACCTATCCTATTGACTTAC

Product: ThiJ family intracellular protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKKAIVFLANGFEEMEATGTVDILRRGGIDTKTVSITDDRKVIGAHNMEYTADATFTEIDLSDADALILPGGMPGASNLN
NSEPVKEVLLQQYREGRIVAAICAAPMVLGGLGLLKGRKATCYPGFEPKLIGATVTGEAVEVDGNVVTGRGPGLVFNFGL
ALVSVLKGDAVAEEVAAGLLL

Sequences:

>Translated_181_residues
MKKAIVFLANGFEEMEATGTVDILRRGGIDTKTVSITDDRKVIGAHNMEYTADATFTEIDLSDADALILPGGMPGASNLN
NSEPVKEVLLQQYREGRIVAAICAAPMVLGGLGLLKGRKATCYPGFEPKLIGATVTGEAVEVDGNVVTGRGPGLVFNFGL
ALVSVLKGDAVAEEVAAGLLL
>Mature_181_residues
MKKAIVFLANGFEEMEATGTVDILRRGGIDTKTVSITDDRKVIGAHNMEYTADATFTEIDLSDADALILPGGMPGASNLN
NSEPVKEVLLQQYREGRIVAAICAAPMVLGGLGLLKGRKATCYPGFEPKLIGATVTGEAVEVDGNVVTGRGPGLVFNFGL
ALVSVLKGDAVAEEVAAGLLL

Specific function: Involved in biogenesis of ribosomal proteins, probably as a ribosomal protein-folding chaperone. Interacts with ribosomal subunits, ribosomes and polysomes. Confers resistance to oxidative stress [H]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C56 family [H]

Homologues:

Organism=Homo sapiens, GI183227678, Length=184, Percent_Identity=37.5, Blast_Score=107, Evalue=4e-24,
Organism=Homo sapiens, GI31543380, Length=184, Percent_Identity=37.5, Blast_Score=107, Evalue=4e-24,
Organism=Escherichia coli, GI87081736, Length=184, Percent_Identity=36.4130434782609, Blast_Score=101, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17531319, Length=179, Percent_Identity=35.195530726257, Blast_Score=96, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17558714, Length=171, Percent_Identity=30.9941520467836, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24653499, Length=183, Percent_Identity=38.2513661202186, Blast_Score=119, Evalue=1e-27,
Organism=Drosophila melanogaster, GI28571932, Length=182, Percent_Identity=35.7142857142857, Blast_Score=115, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006287
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 18834; Mature: 18834

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAIVFLANGFEEMEATGTVDILRRGGIDTKTVSITDDRKVIGAHNMEYTADATFTEID
CCCEEEEEECCHHHHHCCCHHHHHHCCCCCCEEEEECCCCEEEECCCCEEECCCEEEEEE
LSDADALILPGGMPGASNLNNSEPVKEVLLQQYREGRIVAAICAAPMVLGGLGLLKGRKA
CCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCC
TCYPGFEPKLIGATVTGEAVEVDGNVVTGRGPGLVFNFGLALVSVLKGDAVAEEVAAGLL
EECCCCCCEEEEEEECCCEEEECCEEEECCCCCEEEHHHHHHHHHHCCCHHHHHHHHHCC
L
C
>Mature Secondary Structure
MKKAIVFLANGFEEMEATGTVDILRRGGIDTKTVSITDDRKVIGAHNMEYTADATFTEID
CCCEEEEEECCHHHHHCCCHHHHHHCCCCCCEEEEECCCCEEEECCCCEEECCCEEEEEE
LSDADALILPGGMPGASNLNNSEPVKEVLLQQYREGRIVAAICAAPMVLGGLGLLKGRKA
CCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCC
TCYPGFEPKLIGATVTGEAVEVDGNVVTGRGPGLVFNFGLALVSVLKGDAVAEEVAAGLL
EECCCCCCEEEEEEECCCEEEECCEEEECCCCCEEEHHHHHHHHHHCCCHHHHHHHHHCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9592144 [H]