Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is 150008182

Identifier: 150008182

GI number: 150008182

Start: 1811859

End: 1812713

Strand: Direct

Name: 150008182

Synonym: BDI_1548

Alternate gene names: NA

Gene position: 1811859-1812713 (Clockwise)

Preceding gene: 150008181

Following gene: 150008183

Centisome position: 37.66

GC content: 50.53

Gene sequence:

>855_bases
ATGAGACTGAATAAGGATGACATATACAGTTTGATCGGTACCGTTGCTTTTCACGGTGTCATTCTACTGATACTTTGGTT
TACCGTATTGAAAACCGAGGTACCGGATGAAGACGGGGGTGTACTCGTTAATTTCGGGAATGTAGATGCCGCCGCCGGAA
TGTTCGAGCCCAAATATACCGGGCAAGAACCGCCTCAGGAAACGACCACTCCCCCTCCTCCCGTACCGGAGCCGCAAGTG
GAAACACCCAAGCAGGAACTCATCACTCAAGATATCGAGGAAAGCGTAGCCCTTGAGGAGGCTAAAAAGAAGAATGAGGA
AGAGAAACGCAAGAAACAAGAGGCTGAGAAGAAACAGAAAGAAGAGGAGGAGAAAGAACGTATCCGCCGGGAAGAAGCCG
AGAAGAGACGTCTGGCCGAGGAACGCCGCAAGAAGGAACAAGCCATTAGCAACAAGGTGGCCGGAGCTTTTGGTATGGGA
AACGCCGAGGGTAACAGCCAAGGCGACGCTGAAAGCGGAACCGGTAACCAAGGAAGTCCGTTCGGTAACTCTGATCACGG
GGCGAATGAAGGCGTAGGCGGTTACGGATCATTTAATTTGAACGGCCGTTCCATTGGTGCCGGAGGTCTCCCCCGTCCCG
CTTATACGATCCAAGAGGAGGGGCGTATTGTTATCAATATAACCGTAGATCCGAAAGGCAACGTTATATTTGCCGAGGTA
GGCCGGGGAACTAATATCGACAACGCCTCCATGCGTAAAAGCGCTTTGGACGCGGCTCGAAAGGCGAAGTTCAACAGTAT
CAGCGGCGCTAATAACCAGAGTGGTACTATTACTTACGTGTACAAATTTAAATAA

Upstream 100 bases:

>100_bases
ACGAGACCGTGCCTTACAAAGAGATTGTAAAGATACTGAATATAGCGAACGAGAATAAATTCAAGATGGTGCTTGCCACC
CGTCCGCAGAAATAACAGAT

Downstream 100 bases:

>100_bases
TTGAATCTTATGAAGAAAGCGATCGTATTCTTAGCGAATGGCTTCGAGGAAATGGAAGCCACGGGAACCGTAGACATTTT
GCGTCGCGGAGGTATAGACA

Product: TonB-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MRLNKDDIYSLIGTVAFHGVILLILWFTVLKTEVPDEDGGVLVNFGNVDAAAGMFEPKYTGQEPPQETTTPPPPVPEPQV
ETPKQELITQDIEESVALEEAKKKNEEEKRKKQEAEKKQKEEEEKERIRREEAEKRRLAEERRKKEQAISNKVAGAFGMG
NAEGNSQGDAESGTGNQGSPFGNSDHGANEGVGGYGSFNLNGRSIGAGGLPRPAYTIQEEGRIVINITVDPKGNVIFAEV
GRGTNIDNASMRKSALDAARKAKFNSISGANNQSGTITYVYKFK

Sequences:

>Translated_284_residues
MRLNKDDIYSLIGTVAFHGVILLILWFTVLKTEVPDEDGGVLVNFGNVDAAAGMFEPKYTGQEPPQETTTPPPPVPEPQV
ETPKQELITQDIEESVALEEAKKKNEEEKRKKQEAEKKQKEEEEKERIRREEAEKRRLAEERRKKEQAISNKVAGAFGMG
NAEGNSQGDAESGTGNQGSPFGNSDHGANEGVGGYGSFNLNGRSIGAGGLPRPAYTIQEEGRIVINITVDPKGNVIFAEV
GRGTNIDNASMRKSALDAARKAKFNSISGANNQSGTITYVYKFK
>Mature_284_residues
MRLNKDDIYSLIGTVAFHGVILLILWFTVLKTEVPDEDGGVLVNFGNVDAAAGMFEPKYTGQEPPQETTTPPPPVPEPQV
ETPKQELITQDIEESVALEEAKKKNEEEKRKKQEAEKKQKEEEEKERIRREEAEKRRLAEERRKKEQAISNKVAGAFGMG
NAEGNSQGDAESGTGNQGSPFGNSDHGANEGVGGYGSFNLNGRSIGAGGLPRPAYTIQEEGRIVINITVDPKGNVIFAEV
GRGTNIDNASMRKSALDAARKAKFNSISGANNQSGTITYVYKFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30982; Mature: 30982

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLNKDDIYSLIGTVAFHGVILLILWFTVLKTEVPDEDGGVLVNFGNVDAAAGMFEPKYT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHCCCCCCCC
GQEPPQETTTPPPPVPEPQVETPKQELITQDIEESVALEEAKKKNEEEKRKKQEAEKKQK
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
EEEEKERIRREEAEKRRLAEERRKKEQAISNKVAGAFGMGNAEGNSQGDAESGTGNQGSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
FGNSDHGANEGVGGYGSFNLNGRSIGAGGLPRPAYTIQEEGRIVINITVDPKGNVIFAEV
CCCCCCCCCCCCCCCCEECCCCCEECCCCCCCCCEEECCCCEEEEEEEECCCCCEEEEEC
GRGTNIDNASMRKSALDAARKAKFNSISGANNQSGTITYVYKFK
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MRLNKDDIYSLIGTVAFHGVILLILWFTVLKTEVPDEDGGVLVNFGNVDAAAGMFEPKYT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHCCCCCCCC
GQEPPQETTTPPPPVPEPQVETPKQELITQDIEESVALEEAKKKNEEEKRKKQEAEKKQK
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
EEEEKERIRREEAEKRRLAEERRKKEQAISNKVAGAFGMGNAEGNSQGDAESGTGNQGSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
FGNSDHGANEGVGGYGSFNLNGRSIGAGGLPRPAYTIQEEGRIVINITVDPKGNVIFAEV
CCCCCCCCCCCCCCCCEECCCCCEECCCCCCCCCEEECCCCEEEEEEEECCCCCEEEEEC
GRGTNIDNASMRKSALDAARKAKFNSISGANNQSGTITYVYKFK
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA