| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008037
Identifier: 150008037
GI number: 150008037
Start: 1627961
End: 1628725
Strand: Reverse
Name: 150008037
Synonym: BDI_1400
Alternate gene names: NA
Gene position: 1628725-1627961 (Counterclockwise)
Preceding gene: 150008038
Following gene: 150008036
Centisome position: 33.85
GC content: 44.71
Gene sequence:
>765_bases ATGGCTACAGATAAACAATCAGCTGAAAAGGAATATACGGTTGAAGAAAAGCTTTCTACGCTGTATCAACTTCAGACGAT GATGACTGAAATTGATAAGATCAAGACCCTTCGTGGTGAGCTTCCTCTGGAGGTTCAAGACTTGGAGGACGAGATCGCAG GACTGGAAACACGTCTCCAGAACTATCAGGCGGAGATCAAGGAGTTTGAGGCTTCTGTTGTTGAGCAAAAGCATAAGATC ACGGAATCTACCACATTGATAGATCGCTATAAGGCACAATTAGATAATGTGCGTAATAACCGGGAGTTTGATAACCTGTC CAAGGAGATCGAGTTCCAAGGTTTGGAAATTGAGTTCTCAGAGAAGAAAATCCGTGAGTTCGGAGAGGCGGTAGACGCTA AGAAAAAAGATATCGCTGAACTGACTGAGAAGCTGGAAGGCCGTAAGGCTGACTTGGTTCAGAAAAAGAGCGAGTTGGAG CAGATCATTTCCGAGACAAAGCAGGATGAGGAGAAACTTCGTGAGAAAGCGAAGAAGCTGGAAGCCACTATCGAACCTCG TTTGTTGACCGCTTTCAAGCGTATCCGTAAAGGTGCTCGTAACGGTTTGGCTGTTGTTTATGTGCAACGTGGCGCTTGCG GTGGTTGCTTTAACAAGATCCCGCCTCAGAAGCAATTGGATATCAAGTTGCGTAAGAAAATTATTGTTTGCGAATACTGT GGTCGTATTATGATCGACCCGGAATTAGCAGGTGTAGAAGATTAA
Upstream 100 bases:
>100_bases TGTACAAAAGACATATTTTATAACATAATATCGAAAAAATTCCCTACCTTTGCGGTACATTTTTCGAATGTTAATTCAAA CCCAGTAAAATATTTATAGA
Downstream 100 bases:
>100_bases TTCAAAAGATCTATAAGTAATGGCTCTAGCTAAAACCGGCTAGGGCCATTATTGTTTTTAATACAAAGATGTTATGATAC ATACGATACGTTTATATATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MATDKQSAEKEYTVEEKLSTLYQLQTMMTEIDKIKTLRGELPLEVQDLEDEIAGLETRLQNYQAEIKEFEASVVEQKHKI TESTTLIDRYKAQLDNVRNNREFDNLSKEIEFQGLEIEFSEKKIREFGEAVDAKKKDIAELTEKLEGRKADLVQKKSELE QIISETKQDEEKLREKAKKLEATIEPRLLTAFKRIRKGARNGLAVVYVQRGACGGCFNKIPPQKQLDIKLRKKIIVCEYC GRIMIDPELAGVED
Sequences:
>Translated_254_residues MATDKQSAEKEYTVEEKLSTLYQLQTMMTEIDKIKTLRGELPLEVQDLEDEIAGLETRLQNYQAEIKEFEASVVEQKHKI TESTTLIDRYKAQLDNVRNNREFDNLSKEIEFQGLEIEFSEKKIREFGEAVDAKKKDIAELTEKLEGRKADLVQKKSELE QIISETKQDEEKLREKAKKLEATIEPRLLTAFKRIRKGARNGLAVVYVQRGACGGCFNKIPPQKQLDIKLRKKIIVCEYC GRIMIDPELAGVED >Mature_253_residues ATDKQSAEKEYTVEEKLSTLYQLQTMMTEIDKIKTLRGELPLEVQDLEDEIAGLETRLQNYQAEIKEFEASVVEQKHKIT ESTTLIDRYKAQLDNVRNNREFDNLSKEIEFQGLEIEFSEKKIREFGEAVDAKKKDIAELTEKLEGRKADLVQKKSELEQ IISETKQDEEKLREKAKKLEATIEPRLLTAFKRIRKGARNGLAVVYVQRGACGGCFNKIPPQKQLDIKLRKKIIVCEYCG RIMIDPELAGVED
Specific function: Unknown
COG id: COG1579
COG function: function code R; Zn-ribbon protein, possibly nucleic acid-binding
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29300; Mature: 29169
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATDKQSAEKEYTVEEKLSTLYQLQTMMTEIDKIKTLRGELPLEVQDLEDEIAGLETRLQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH NYQAEIKEFEASVVEQKHKITESTTLIDRYKAQLDNVRNNREFDNLSKEIEFQGLEIEFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEC EKKIREFGEAVDAKKKDIAELTEKLEGRKADLVQKKSELEQIISETKQDEEKLREKAKKL HHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EATIEPRLLTAFKRIRKGARNGLAVVYVQRGACGGCFNKIPPQKQLDIKLRKKIIVCEYC HHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHHHC GRIMIDPELAGVED CCEEECCCCCCCCC >Mature Secondary Structure ATDKQSAEKEYTVEEKLSTLYQLQTMMTEIDKIKTLRGELPLEVQDLEDEIAGLETRLQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH NYQAEIKEFEASVVEQKHKITESTTLIDRYKAQLDNVRNNREFDNLSKEIEFQGLEIEFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEC EKKIREFGEAVDAKKKDIAELTEKLEGRKADLVQKKSELEQIISETKQDEEKLREKAKKL HHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EATIEPRLLTAFKRIRKGARNGLAVVYVQRGACGGCFNKIPPQKQLDIKLRKKIIVCEYC HHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHHHC GRIMIDPELAGVED CCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA