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The map label for this gene is yjdI [H]

Identifier: 150008010

GI number: 150008010

Start: 1594302

End: 1594784

Strand: Direct

Name: yjdI [H]

Synonym: BDI_1373

Alternate gene names: 150008010

Gene position: 1594302-1594784 (Clockwise)

Preceding gene: 150008009

Following gene: 150008012

Centisome position: 33.14

GC content: 50.31

Gene sequence:

>483_bases
ATGAAAGAGAAGATTAATAAGACAAACGTGGCACGCCTGCTGGACAAGGCTAAGATCGCCTACCAGCTCGTGCCTTATGA
AGTAGACGAGAATGATCTGAGCGCTACGCATGTAGCGGAGCAGCTAGGGGAAGATATCGCCCAAGTATTCAAGACCTTGA
TCTTGCATGGCGATAAGAGCGGTTATTTCGTATGCGTGATCCCCGGAGCGGACGAGGTGGACTTGAAAAAGGCGGCCAAG
GTATCCGGGAACAAGAAATGTGAGATGATCCCCGTGAAAGAGTTGTTACCACTCACCGGTTATATCCGGGGAGGATGCTC
GCCTATCGGCATGAAAAAGCATTTCCCTACGTATATCCATCCTACGGCATCCGGCTTCGATAAGATCTATGTAAGCGCCG
GACAACGAGGCTTGCAGATACAGATAGCCCCCGCCGATTTAATCAAGGTGGCGCAAGCTATAGAAGCGGATTTGATCGCA
TGA

Upstream 100 bases:

>100_bases
TACCCAAGTGGTCTCCATCCATCAGCATGTCAAGGTGAAGGTTCTAAGCGTAGACCTATCCAGAAAACGTGTTCAATTAT
CCATGAAAGGGATCTAAACG

Downstream 100 bases:

>100_bases
TCTAACATCGCTGAGAGTACTTCGTAAGAAGTACTCCAGTACTCCGCAAAGAGTATCGCAGTACTTCCTAGGGAGTACTG
GAGTACTCCTTATGAGGGAC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MKEKINKTNVARLLDKAKIAYQLVPYEVDENDLSATHVAEQLGEDIAQVFKTLILHGDKSGYFVCVIPGADEVDLKKAAK
VSGNKKCEMIPVKELLPLTGYIRGGCSPIGMKKHFPTYIHPTASGFDKIYVSAGQRGLQIQIAPADLIKVAQAIEADLIA

Sequences:

>Translated_160_residues
MKEKINKTNVARLLDKAKIAYQLVPYEVDENDLSATHVAEQLGEDIAQVFKTLILHGDKSGYFVCVIPGADEVDLKKAAK
VSGNKKCEMIPVKELLPLTGYIRGGCSPIGMKKHFPTYIHPTASGFDKIYVSAGQRGLQIQIAPADLIKVAQAIEADLIA
>Mature_160_residues
MKEKINKTNVARLLDKAKIAYQLVPYEVDENDLSATHVAEQLGEDIAQVFKTLILHGDKSGYFVCVIPGADEVDLKKAAK
VSGNKKCEMIPVKELLPLTGYIRGGCSPIGMKKHFPTYIHPTASGFDKIYVSAGQRGLQIQIAPADLIKVAQAIEADLIA

Specific function: May Be Involved In The Suppression Of Transcription Of Usha. [C]

COG id: COG2606

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786688, Length=154, Percent_Identity=42.8571428571429, Blast_Score=105, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004369
- InterPro:   IPR007214 [H]

Pfam domain/function: PF04073 YbaK [H]

EC number: NA

Molecular weight: Translated: 17422; Mature: 17422

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKINKTNVARLLDKAKIAYQLVPYEVDENDLSATHVAEQLGEDIAQVFKTLILHGDKS
CCCCCCHHHHHHHHHHHHHEEEEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHEECCCC
GYFVCVIPGADEVDLKKAAKVSGNKKCEMIPVKELLPLTGYIRGGCSPIGMKKHFPTYIH
CEEEEEECCCCCCHHHHHHHCCCCCCEEEECHHHHHCHHHHHCCCCCCCCCCCCCCCEEC
PTASGFDKIYVSAGQRGLQIQIAPADLIKVAQAIEADLIA
CCCCCCCEEEEECCCCCCEEEECHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKEKINKTNVARLLDKAKIAYQLVPYEVDENDLSATHVAEQLGEDIAQVFKTLILHGDKS
CCCCCCHHHHHHHHHHHHHEEEEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHEECCCC
GYFVCVIPGADEVDLKKAAKVSGNKKCEMIPVKELLPLTGYIRGGCSPIGMKKHFPTYIH
CEEEEEECCCCCCHHHHHHHCCCCCCEEEECHHHHHCHHHHHCCCCCCCCCCCCCCCEEC
PTASGFDKIYVSAGQRGLQIQIAPADLIKVAQAIEADLIA
CCCCCCCEEEEECCCCCCEEEECHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]