| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is yfbT [H]
Identifier: 150007838
GI number: 150007838
Start: 1391775
End: 1392425
Strand: Direct
Name: yfbT [H]
Synonym: BDI_1196
Alternate gene names: 150007838
Gene position: 1391775-1392425 (Clockwise)
Preceding gene: 150007828
Following gene: 150007845
Centisome position: 28.93
GC content: 46.54
Gene sequence:
>651_bases ATGATTATTTATATGAAACAGCTAAAGACCGCCTTGTTCGATTTTGACGGCGTAGTAGTAGATACGGAACCTATTTACGA TTTATTCTGGAACGATGCCGCTAAACGTTATGGCTTAGGTATCGATAATTTCGCTGATATTATAAAGGGTACGACCCTAC CGTATATTCTGGAGAAGTATTTTTCCGGATATACGGAGGAGTTCCGCCAAATGGTGACCAAAGAATCTACAGAGTATGAG AAGACGATGCCCTTGCCTCCCATGCCCGGCTCCATCGAGTTCATCCGTATGCTGAAGGAGCACGGCGTACAGATAGGCTT GGTTACCAGCTCGGATAACGCGAAGGTGAAACGGGCTTTCGGGCTTCTACATCTGGACAATCTATTCGATACCCTAGTGA CCGCCGACCGCATCACGCAAGGTAAGCCCGATCCGATGTGTTATCTATTGGCGGCGAAAGACTTGAACGTATCTCCCGAG GATTGTATCGTATTCGAGGATTCTTTCAACGGCATACAGTCCGGGAAGGACGCAGGGATGCGTGTCATCGGGTTAAGTAC GACGAATCCGGCGGAATCTTTAAGAGATAAAGTATATGAGGTAATCCCCAATTTCGAGAAAGTCACGTTCGAGGATTATT TGAGATGGTAA
Upstream 100 bases:
>100_bases CTTATTTATTTTTAATATATATATAATCAAGCTATGTGTGCGTCCACAAAGATAATTGATTTCATAAAAAATAGACGTAT CTTCGCGATATAAATATTAA
Downstream 100 bases:
>100_bases GCAATCGAGAAAAAGGAAATGATTATTTCCTTCATTCCTTCACCTACCCCTTTACACACACCCACACACATGTATGCGTA CATTAATAATACGCGTATGC
Product: putative phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MIIYMKQLKTALFDFDGVVVDTEPIYDLFWNDAAKRYGLGIDNFADIIKGTTLPYILEKYFSGYTEEFRQMVTKESTEYE KTMPLPPMPGSIEFIRMLKEHGVQIGLVTSSDNAKVKRAFGLLHLDNLFDTLVTADRITQGKPDPMCYLLAAKDLNVSPE DCIVFEDSFNGIQSGKDAGMRVIGLSTTNPAESLRDKVYEVIPNFEKVTFEDYLRW
Sequences:
>Translated_216_residues MIIYMKQLKTALFDFDGVVVDTEPIYDLFWNDAAKRYGLGIDNFADIIKGTTLPYILEKYFSGYTEEFRQMVTKESTEYE KTMPLPPMPGSIEFIRMLKEHGVQIGLVTSSDNAKVKRAFGLLHLDNLFDTLVTADRITQGKPDPMCYLLAAKDLNVSPE DCIVFEDSFNGIQSGKDAGMRVIGLSTTNPAESLRDKVYEVIPNFEKVTFEDYLRW >Mature_216_residues MIIYMKQLKTALFDFDGVVVDTEPIYDLFWNDAAKRYGLGIDNFADIIKGTTLPYILEKYFSGYTEEFRQMVTKESTEYE KTMPLPPMPGSIEFIRMLKEHGVQIGLVTSSDNAKVKRAFGLLHLDNLFDTLVTADRITQGKPDPMCYLLAAKDLNVSPE DCIVFEDSFNGIQSGKDAGMRVIGLSTTNPAESLRDKVYEVIPNFEKVTFEDYLRW
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrate glucose 6-phosphate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Homo sapiens, GI197382691, Length=218, Percent_Identity=27.9816513761468, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI207113149, Length=146, Percent_Identity=31.5068493150685, Blast_Score=68, Evalue=6e-12, Organism=Escherichia coli, GI87082080, Length=211, Percent_Identity=32.7014218009479, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1788021, Length=187, Percent_Identity=28.3422459893048, Blast_Score=95, Evalue=3e-21, Organism=Escherichia coli, GI1789046, Length=179, Percent_Identity=31.2849162011173, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1787576, Length=216, Percent_Identity=25.9259259259259, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1790151, Length=191, Percent_Identity=28.2722513089005, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 - InterPro: IPR023198 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 24584; Mature: 24584
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIYMKQLKTALFDFDGVVVDTEPIYDLFWNDAAKRYGLGIDNFADIIKGTTLPYILEKY CEEEHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHH FSGYTEEFRQMVTKESTEYEKTMPLPPMPGSIEFIRMLKEHGVQIGLVTSSDNAKVKRAF HCCHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHH GLLHLDNLFDTLVTADRITQGKPDPMCYLLAAKDLNVSPEDCIVFEDSFNGIQSGKDAGM HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCE RVIGLSTTNPAESLRDKVYEVIPNFEKVTFEDYLRW EEEEECCCCHHHHHHHHHHHHCCCCHHCCHHHHHCC >Mature Secondary Structure MIIYMKQLKTALFDFDGVVVDTEPIYDLFWNDAAKRYGLGIDNFADIIKGTTLPYILEKY CEEEHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHH FSGYTEEFRQMVTKESTEYEKTMPLPPMPGSIEFIRMLKEHGVQIGLVTSSDNAKVKRAF HCCHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHH GLLHLDNLFDTLVTADRITQGKPDPMCYLLAAKDLNVSPEDCIVFEDSFNGIQSGKDAGM HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCE RVIGLSTTNPAESLRDKVYEVIPNFEKVTFEDYLRW EEEEECCCCHHHHHHHHHHHHCCCCHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 10493123 [H]