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The map label for this gene is ytsP [H]

Identifier: 150007828

GI number: 150007828

Start: 1380932

End: 1381408

Strand: Direct

Name: ytsP [H]

Synonym: BDI_1186

Alternate gene names: 150007828

Gene position: 1380932-1381408 (Clockwise)

Preceding gene: 150007826

Following gene: 150007838

Centisome position: 28.7

GC content: 48.22

Gene sequence:

>477_bases
ATGGCAGAGGAACTACGGATTAAAAATGGTGATAAACAGGAAATGTATGAGACGTTGCTCCCGCAAATCGCCTCATTGGT
AGGTAACGAGACCGACCTAATCGCTAACATGGCGAACGTCGCCGCAGCACTCAAGCAAACTTTCGGTTTCTTTTGGGTGG
GTTTCTACCGGGTCATAGACAATCAGTTGGTATTAGCGCCTTTTCAAGGCCCTATCGCCTGTACACGAATCAAATACGGA
AAAGGGGTATGCGGCACGGCTTGGAAGGAGACCCGTACGATCATCGTACCGGATGTAGACGCTTTCCCGGGACATATCGC
TTGTAGCTCGGCGTCACGCTCTGAGATCGTAGTTCCCGTGATATGGGCGGATAAGGTAATCGCTGTCCTTGATATAGACA
GTGATCAACCGGATAGTTTCGATGAGACTGATCAGATCTTTTTGGAAAAGATAGTGGAATTGCTTCCTCATCAGTAA

Upstream 100 bases:

>100_bases
AGTCACTGACACTGACATATAATTTCGCTTAGTTATTTCTGCAAAAATCATTCATATGTAAACAAGTTTCGTATATTCGC
GACCTTATAATAGTTTAAAT

Downstream 100 bases:

>100_bases
GCCTCGCCTCAGTACTTCCCAAGAAGTACTGTAGTACTGCCTAAGAGGTACTGCAGTACTTTGTAAGGAGTACTCCAGTA
CTCTCCGAAGAAATACCACA

Product: GAF domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MAEELRIKNGDKQEMYETLLPQIASLVGNETDLIANMANVAAALKQTFGFFWVGFYRVIDNQLVLAPFQGPIACTRIKYG
KGVCGTAWKETRTIIVPDVDAFPGHIACSSASRSEIVVPVIWADKVIAVLDIDSDQPDSFDETDQIFLEKIVELLPHQ

Sequences:

>Translated_158_residues
MAEELRIKNGDKQEMYETLLPQIASLVGNETDLIANMANVAAALKQTFGFFWVGFYRVIDNQLVLAPFQGPIACTRIKYG
KGVCGTAWKETRTIIVPDVDAFPGHIACSSASRSEIVVPVIWADKVIAVLDIDSDQPDSFDETDQIFLEKIVELLPHQ
>Mature_157_residues
AEELRIKNGDKQEMYETLLPQIASLVGNETDLIANMANVAAALKQTFGFFWVGFYRVIDNQLVLAPFQGPIACTRIKYGK
GVCGTAWKETRTIIVPDVDAFPGHIACSSASRSEIVVPVIWADKVIAVLDIDSDQPDSFDETDQIFLEKIVELLPHQ

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=146, Percent_Identity=43.1506849315069, Blast_Score=120, Evalue=6e-29,
Organism=Saccharomyces cerevisiae, GI6322781, Length=156, Percent_Identity=41.025641025641, Blast_Score=125, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 17513; Mature: 17382

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEELRIKNGDKQEMYETLLPQIASLVGNETDLIANMANVAAALKQTFGFFWVGFYRVID
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NQLVLAPFQGPIACTRIKYGKGVCGTAWKETRTIIVPDVDAFPGHIACSSASRSEIVVPV
CCEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCEEEEE
IWADKVIAVLDIDSDQPDSFDETDQIFLEKIVELLPHQ
EECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AEELRIKNGDKQEMYETLLPQIASLVGNETDLIANMANVAAALKQTFGFFWVGFYRVID
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NQLVLAPFQGPIACTRIKYGKGVCGTAWKETRTIIVPDVDAFPGHIACSSASRSEIVVPV
CCEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCEEEEE
IWADKVIAVLDIDSDQPDSFDETDQIFLEKIVELLPHQ
EECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]