| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150007808
Identifier: 150007808
GI number: 150007808
Start: 1356616
End: 1358220
Strand: Direct
Name: 150007808
Synonym: BDI_1166
Alternate gene names: NA
Gene position: 1356616-1358220 (Clockwise)
Preceding gene: 150007807
Following gene: 150007809
Centisome position: 28.2
GC content: 46.67
Gene sequence:
>1605_bases ATGAAAACAAGCATACTTTACATATTCCTACTGTCAGTCCTTTACGCCTGCGACTCCCACTCTCTTCTTCCACCCAAGCA GCAATTGGATCAGCAAATAGCGCAACTGAATGATTATTCTTTGTTGAGCGGTCGCTTGAACGACCAGCTATGCGAAGAGA TAGAAACCCATGCCCAAGAAATAGGGAATGACTCGCTTTTGCTGGCAACCCGCCAAATCATATACACTCGCTATTGCAGA TTACAGGACACGGCTCATGCGAGAATGCTACTCGACCGCATGAAACCTTATGCCATCCGCATAAAAGACAAGCACCTTCT CATGAATCACCTGCGTATGGCATTTCTTCACGCACAGACACGCCAACCCGCAGAATGCGAGCGATGGATAAACGAGGCAC GAAAATATGCATATATAAATCCTCAAAACTGGTATATCACGGCGGCTAACGCTTGTCTTGAATGTGGATTATATCCCCAA GCACTCATCTATGCGGATTCAGCATTGGTGAACTTGAAATATAAAGTGATAAGCTCTCCTCACTTAGTAAAAGCTATAGC ATTAAGCCGTACGGGAAAGACCGCCGAAGCGGAGGAATGGACCAAACGATGCATTACCGATATCCGCCACTTTCAGGCGA AACACCAAATACACACGATCAGCTATCTGCAATATCAACTCTTCATGGAATACGCCGTCTCTCTCCGGAAACATGGAAAA AACAAAGAGGCACTATCCGTATTGGAGGAATTAGACAGAGTCTCATTCAATAATGTCGCCACGCCTCTCTTGAGGAACAA AGACAATATCGAGGAATATAAGGTGCGTGTGGCACGTATGTTGTCCGAATGCTATTATACGACCGGAAATCAATCGGAAG CCATCCAACAGGCAAACCGGGCTGACTCCCTACAATCCCATTATGCCCAAGAGCAAATGAACATACGCAGAAAGATGATC AGCGAAAGCCTACAAAACGAACTATTATCCACCCGCTTAAAAAGTCAGAAGGTGGAGGCGGAACAGGCACGGCTCATCCA GTATATCCTAACCGGAATCATTATTTTACTCATGGCTATCCTAACCGGAGGATATCTTTGGTGGAGAAATCATCGCCGTA GCCTACGCCAGTTATTCGATTTATTGATAAGCCATCATGCAGCTTGGTTGCTAATACACGATCCACTTCCGCTAATCTCC CGGCCACAAATAAAGTTACCAGATCATTCAGAGGCAAACACCGAGGTCGCAACAAAAGCTGATAATCTCCTATATCAACG AATCCTATCAGTTATGAAAGAGCAAAAGCCTTTCTTAAATCCTAATCTCGACCTTGTGACCCTCTCCCGTCTAGTGGGTA CTAACCGAACACAACTATCCACCACCCTCAATAGGCAGACGGGAATGAACTTTAGCCGTTGGCTGGCTGAATACAGGGTA CACCACCTCCTCTCGCTCGTCACCCTACACCCCGACAGTGACATCACCGCACTGGCCTCCGAATCAGGCTTCACCTCCCG AACCTCCTTCTTCCGGCAGTTCCGGCAAGTCACCGGACTTACGCCCAACCAATACAGAAACGTACGAAAAGAGACCGACA AATAA
Upstream 100 bases:
>100_bases GATTTACGCCCCACTCGCTATTCAGCCAGCACGAGATCTTACCTTCAACAAAATACCCAGCCTTTTTTCGGTCTGGAATT ACAAATAAAACTATGACATC
Downstream 100 bases:
>100_bases TCTGTTAAAGTACGTGTCTAGCCTTTGATGCAGGGGCTTTACGGCCCTTGGTGTACCAGATCGTTCGGATCAAGTTTCAA TACGTTCGCATCTTTTCCCT
Product: transcriptional regulator
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 534; Mature: 534
Protein sequence:
>534_residues MKTSILYIFLLSVLYACDSHSLLPPKQQLDQQIAQLNDYSLLSGRLNDQLCEEIETHAQEIGNDSLLLATRQIIYTRYCR LQDTAHARMLLDRMKPYAIRIKDKHLLMNHLRMAFLHAQTRQPAECERWINEARKYAYINPQNWYITAANACLECGLYPQ ALIYADSALVNLKYKVISSPHLVKAIALSRTGKTAEAEEWTKRCITDIRHFQAKHQIHTISYLQYQLFMEYAVSLRKHGK NKEALSVLEELDRVSFNNVATPLLRNKDNIEEYKVRVARMLSECYYTTGNQSEAIQQANRADSLQSHYAQEQMNIRRKMI SESLQNELLSTRLKSQKVEAEQARLIQYILTGIIILLMAILTGGYLWWRNHRRSLRQLFDLLISHHAAWLLIHDPLPLIS RPQIKLPDHSEANTEVATKADNLLYQRILSVMKEQKPFLNPNLDLVTLSRLVGTNRTQLSTTLNRQTGMNFSRWLAEYRV HHLLSLVTLHPDSDITALASESGFTSRTSFFRQFRQVTGLTPNQYRNVRKETDK
Sequences:
>Translated_534_residues MKTSILYIFLLSVLYACDSHSLLPPKQQLDQQIAQLNDYSLLSGRLNDQLCEEIETHAQEIGNDSLLLATRQIIYTRYCR LQDTAHARMLLDRMKPYAIRIKDKHLLMNHLRMAFLHAQTRQPAECERWINEARKYAYINPQNWYITAANACLECGLYPQ ALIYADSALVNLKYKVISSPHLVKAIALSRTGKTAEAEEWTKRCITDIRHFQAKHQIHTISYLQYQLFMEYAVSLRKHGK NKEALSVLEELDRVSFNNVATPLLRNKDNIEEYKVRVARMLSECYYTTGNQSEAIQQANRADSLQSHYAQEQMNIRRKMI SESLQNELLSTRLKSQKVEAEQARLIQYILTGIIILLMAILTGGYLWWRNHRRSLRQLFDLLISHHAAWLLIHDPLPLIS RPQIKLPDHSEANTEVATKADNLLYQRILSVMKEQKPFLNPNLDLVTLSRLVGTNRTQLSTTLNRQTGMNFSRWLAEYRV HHLLSLVTLHPDSDITALASESGFTSRTSFFRQFRQVTGLTPNQYRNVRKETDK >Mature_534_residues MKTSILYIFLLSVLYACDSHSLLPPKQQLDQQIAQLNDYSLLSGRLNDQLCEEIETHAQEIGNDSLLLATRQIIYTRYCR LQDTAHARMLLDRMKPYAIRIKDKHLLMNHLRMAFLHAQTRQPAECERWINEARKYAYINPQNWYITAANACLECGLYPQ ALIYADSALVNLKYKVISSPHLVKAIALSRTGKTAEAEEWTKRCITDIRHFQAKHQIHTISYLQYQLFMEYAVSLRKHGK NKEALSVLEELDRVSFNNVATPLLRNKDNIEEYKVRVARMLSECYYTTGNQSEAIQQANRADSLQSHYAQEQMNIRRKMI SESLQNELLSTRLKSQKVEAEQARLIQYILTGIIILLMAILTGGYLWWRNHRRSLRQLFDLLISHHAAWLLIHDPLPLIS RPQIKLPDHSEANTEVATKADNLLYQRILSVMKEQKPFLNPNLDLVTLSRLVGTNRTQLSTTLNRQTGMNFSRWLAEYRV HHLLSLVTLHPDSDITALASESGFTSRTSFFRQFRQVTGLTPNQYRNVRKETDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61995; Mature: 61995
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSILYIFLLSVLYACDSHSLLPPKQQLDQQIAQLNDYSLLSGRLNDQLCEEIETHAQE CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHH IGNDSLLLATRQIIYTRYCRLQDTAHARMLLDRMKPYAIRIKDKHLLMNHLRMAFLHAQT HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCC RQPAECERWINEARKYAYINPQNWYITAANACLECGLYPQALIYADSALVNLKYKVISSP CCCHHHHHHHHHHHHEEEECCCCCEEEECHHHHHCCCCHHHHHHHCHHHEEEEEEECCCC HLVKAIALSRTGKTAEAEEWTKRCITDIRHFQAKHQIHTISYLQYQLFMEYAVSLRKHGK HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NKEALSVLEELDRVSFNNVATPLLRNKDNIEEYKVRVARMLSECYYTTGNQSEAIQQANR CHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ADSLQSHYAQEQMNIRRKMISESLQNELLSTRLKSQKVEAEQARLIQYILTGIIILLMAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTGGYLWWRNHRRSLRQLFDLLISHHAAWLLIHDPLPLISRPQIKLPDHSEANTEVATKA HHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHH DNLLYQRILSVMKEQKPFLNPNLDLVTLSRLVGTNRTQLSTTLNRQTGMNFSRWLAEYRV HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH HHLLSLVTLHPDSDITALASESGFTSRTSFFRQFRQVTGLTPNQYRNVRKETDK HHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure MKTSILYIFLLSVLYACDSHSLLPPKQQLDQQIAQLNDYSLLSGRLNDQLCEEIETHAQE CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHH IGNDSLLLATRQIIYTRYCRLQDTAHARMLLDRMKPYAIRIKDKHLLMNHLRMAFLHAQT HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCC RQPAECERWINEARKYAYINPQNWYITAANACLECGLYPQALIYADSALVNLKYKVISSP CCCHHHHHHHHHHHHEEEECCCCCEEEECHHHHHCCCCHHHHHHHCHHHEEEEEEECCCC HLVKAIALSRTGKTAEAEEWTKRCITDIRHFQAKHQIHTISYLQYQLFMEYAVSLRKHGK HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NKEALSVLEELDRVSFNNVATPLLRNKDNIEEYKVRVARMLSECYYTTGNQSEAIQQANR CHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ADSLQSHYAQEQMNIRRKMISESLQNELLSTRLKSQKVEAEQARLIQYILTGIIILLMAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTGGYLWWRNHRRSLRQLFDLLISHHAAWLLIHDPLPLISRPQIKLPDHSEANTEVATKA HHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHH DNLLYQRILSVMKEQKPFLNPNLDLVTLSRLVGTNRTQLSTTLNRQTGMNFSRWLAEYRV HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH HHLLSLVTLHPDSDITALASESGFTSRTSFFRQFRQVTGLTPNQYRNVRKETDK HHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA