| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150007807
Identifier: 150007807
GI number: 150007807
Start: 1354122
End: 1356611
Strand: Direct
Name: 150007807
Synonym: BDI_1165
Alternate gene names: NA
Gene position: 1354122-1356611 (Clockwise)
Preceding gene: 150007806
Following gene: 150007808
Centisome position: 28.14
GC content: 46.59
Gene sequence:
>2490_bases ATGCGTTACTCAACTTTGTACAAAATACCAATAAGGATCGTGACGATATTTCTCTTATTATCATCACTTCATCCGGGCAA TTACCTTCACGGGCAAGAGCAACCGGATACTCTGTCCTTCTATTTACCCAACATTTTGGTAACAGCCATCGAGTCTAAGA CTCCGGGTACGGTTTCCTTGCTTCCTGCATCAACATTGGAACACACGCAACCGATCACGATCGCTGATCTGACACAGTTA TTACCAGGAGGTCTCACCAATAATTCTGGGGTGACAGACGCACAATATTTCTCAGTGCGGGAGGTTTCTTTAAAGAACGG GGTAAACCAATTTCATAAAAACGCAGCTATGGGTGCCCAAATATGGGTAGACGGCTCTCCTCTTCATTTCAACACCGGCA TCAACGAGCCTTACGAAGGATATGATGCCCGTTTTCTATCTCTCAACCAAGTGAAAGAGGCGGAAATCATCCGGGGAATA CCTTCTGCCCGGTACGGAAACTTAACAAATAGCGTATTATTACTCAAGACTCATCAAGGTAGAATGCCTCTCTCCACCAG CATACGTTACAATCCGAAACTGAAACAATATATGCTTGGAAAAGGCTTCTGTATCTCCCCACAAGGCCATACGCTCAACC TGTTAGCGGACTATACCAGCCAAGGCGATTTCCATACCGGCGGCATACGCTTGGCAAACCTTTACCATTGGTTGCCCGCA GGGAAAAAACTAGAATTAAGCCTTACTTACACCTCTCGCATAGGAAAGGAAAAGCAATTCGTCAACGAGCAGAATCATAC ACAAAGACAACGATTGGATCAGCGATTTTCCATACAAGGGGAATGGCAACCCGACCGACGTTGGCTCAAGAAGCTGTCTC TGAGAATAGACGGTTCCCTTCAAAAAAGCAAACAAACAAAGAGTCAGGTCAACAATGCCTCTAGCCAGCTTTATACAGAC CAGAAAGAGAGCGGCGAATGGGAAGCCCATGTTTTATCCTCAAACTACATGTACACATTAGTCAATGAAAGCCGACCTTT TTATGTAGAAACCGAGATGCTGGCGTCTACCTCATTTCCGCTACGGCAGAGACGTGAAATCAGCTTAGCCGCCGGATTCT CATGGCGTGGTGAGGGCAACGAAGGGCGAGGCAGGGATTTCGATCGGCAAAGGCCTCCTTCCACATCTATCCGTCCCCGC TCATTCCGGGAAATCCCATCCTTGCATACGTTCGGTGGCTTCATTGAGGCCACATACCGGACTCCCAACCTCCATGTAGA AGCCGGATTAAGAAATCAAGGATTGAAAAGCCGGGATTATGCCTTAATCTATCAGACAGAACCTCGCCTGAATCTCTTAT GGTCTCTCTGCTCCTCTCCCTCCGGCTATACATTGAGTTTAAAAGCCGGGGTCGGATGGATCAGTTTCATGCCGACATTG GAAAAACTCTACCCGGAAGCTATTTATAATGATAAGGTCTCTTTCTATTATAATGATAGCAATGAAAGTGGAAACACCCT TGGTATTCTCACGACACATGCCCCCGGAATGGAACGAAATATGAAATTAAAACCTACCGTAAATCGAAAGATAGAGGTTG GCCTTATAGGGAAGACTCCGGCCATCCGACTAGACATGACCGTTTTTTTCGAGAAACAAACGGATGGCTTTTCCTCCTCG GCGCAATATATTCCGTTCAGCTATCGGGAATATGATTATCTATCAACCGCCCAACTTCGTCCTGAATACAAAGATGGACA GGTATGGGTGAACGGTAAGGCTGTCCCTTATCAAGAGAAATATAGTTACACGCCGGTATCTGTACCAGTCAATACACTCC ATAGGAAGAAACATGGGATTGAGATGGTAGCGGACCTCGGGACTTTCTCACCCTTGCGTACCTCCCTAATCGTAGACGGG ATTTGGTTATATGTACGAGAAAAGAATACGGTCCTTAACGGGATCTGGCCGATCCAGTACACAGATAAAACAGAATACCC CTACGTAGGTTTTTACGACAGGCAAGGCGGACCGGGAAATGAAAGTCGTTCGGAGATCATCTCCACGAACTTCCGTTTCA TCACCCGCATCCCCAGAATCGGACTGGTCACTACCCTTACGTGGCAAATGATATGGCTCTATAAATATCGTACGCTCTAC AACGGTAGCACTGGCGAGAATGTATGGCCCCTATATTGGTGTGGAACAGACGGAATCATACATCCGTTCACCGAGGCACA GAAAGAGGATCCAGCCTTTGCGCCTTTACTCTCCACCACCGCACCGGAACGATTCCTACCAAACTCTTATAAACCATATG GTATGCTGAATATTCGGGTAAACAAAGCTTTCGGAGAGCACATCACGCTGGCATTCTTTGCCAACAACCTCGCCGATTTA CGCCCCACTCGCTATTCAGCCAGCACGAGATCTTACCTTCAACAAAATACCCAGCCTTTTTTCGGTCTGGAATTACAAAT AAAACTATGA
Upstream 100 bases:
>100_bases GTTTAAAGGGTAGTCTCGAACAAACGACAAGTCCTCAATCGACCCTCGGAGGGGGTGGAAACTTCAGTATTGTCATCTGG CTATAAATAGGTCTAATACT
Downstream 100 bases:
>100_bases CATCATGAAAACAAGCATACTTTACATATTCCTACTGTCAGTCCTTTACGCCTGCGACTCCCACTCTCTTCTTCCACCCA AGCAGCAATTGGATCAGCAA
Product: putative outer membrane receptor protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 829; Mature: 829
Protein sequence:
>829_residues MRYSTLYKIPIRIVTIFLLLSSLHPGNYLHGQEQPDTLSFYLPNILVTAIESKTPGTVSLLPASTLEHTQPITIADLTQL LPGGLTNNSGVTDAQYFSVREVSLKNGVNQFHKNAAMGAQIWVDGSPLHFNTGINEPYEGYDARFLSLNQVKEAEIIRGI PSARYGNLTNSVLLLKTHQGRMPLSTSIRYNPKLKQYMLGKGFCISPQGHTLNLLADYTSQGDFHTGGIRLANLYHWLPA GKKLELSLTYTSRIGKEKQFVNEQNHTQRQRLDQRFSIQGEWQPDRRWLKKLSLRIDGSLQKSKQTKSQVNNASSQLYTD QKESGEWEAHVLSSNYMYTLVNESRPFYVETEMLASTSFPLRQRREISLAAGFSWRGEGNEGRGRDFDRQRPPSTSIRPR SFREIPSLHTFGGFIEATYRTPNLHVEAGLRNQGLKSRDYALIYQTEPRLNLLWSLCSSPSGYTLSLKAGVGWISFMPTL EKLYPEAIYNDKVSFYYNDSNESGNTLGILTTHAPGMERNMKLKPTVNRKIEVGLIGKTPAIRLDMTVFFEKQTDGFSSS AQYIPFSYREYDYLSTAQLRPEYKDGQVWVNGKAVPYQEKYSYTPVSVPVNTLHRKKHGIEMVADLGTFSPLRTSLIVDG IWLYVREKNTVLNGIWPIQYTDKTEYPYVGFYDRQGGPGNESRSEIISTNFRFITRIPRIGLVTTLTWQMIWLYKYRTLY NGSTGENVWPLYWCGTDGIIHPFTEAQKEDPAFAPLLSTTAPERFLPNSYKPYGMLNIRVNKAFGEHITLAFFANNLADL RPTRYSASTRSYLQQNTQPFFGLELQIKL
Sequences:
>Translated_829_residues MRYSTLYKIPIRIVTIFLLLSSLHPGNYLHGQEQPDTLSFYLPNILVTAIESKTPGTVSLLPASTLEHTQPITIADLTQL LPGGLTNNSGVTDAQYFSVREVSLKNGVNQFHKNAAMGAQIWVDGSPLHFNTGINEPYEGYDARFLSLNQVKEAEIIRGI PSARYGNLTNSVLLLKTHQGRMPLSTSIRYNPKLKQYMLGKGFCISPQGHTLNLLADYTSQGDFHTGGIRLANLYHWLPA GKKLELSLTYTSRIGKEKQFVNEQNHTQRQRLDQRFSIQGEWQPDRRWLKKLSLRIDGSLQKSKQTKSQVNNASSQLYTD QKESGEWEAHVLSSNYMYTLVNESRPFYVETEMLASTSFPLRQRREISLAAGFSWRGEGNEGRGRDFDRQRPPSTSIRPR SFREIPSLHTFGGFIEATYRTPNLHVEAGLRNQGLKSRDYALIYQTEPRLNLLWSLCSSPSGYTLSLKAGVGWISFMPTL EKLYPEAIYNDKVSFYYNDSNESGNTLGILTTHAPGMERNMKLKPTVNRKIEVGLIGKTPAIRLDMTVFFEKQTDGFSSS AQYIPFSYREYDYLSTAQLRPEYKDGQVWVNGKAVPYQEKYSYTPVSVPVNTLHRKKHGIEMVADLGTFSPLRTSLIVDG IWLYVREKNTVLNGIWPIQYTDKTEYPYVGFYDRQGGPGNESRSEIISTNFRFITRIPRIGLVTTLTWQMIWLYKYRTLY NGSTGENVWPLYWCGTDGIIHPFTEAQKEDPAFAPLLSTTAPERFLPNSYKPYGMLNIRVNKAFGEHITLAFFANNLADL RPTRYSASTRSYLQQNTQPFFGLELQIKL >Mature_829_residues MRYSTLYKIPIRIVTIFLLLSSLHPGNYLHGQEQPDTLSFYLPNILVTAIESKTPGTVSLLPASTLEHTQPITIADLTQL LPGGLTNNSGVTDAQYFSVREVSLKNGVNQFHKNAAMGAQIWVDGSPLHFNTGINEPYEGYDARFLSLNQVKEAEIIRGI PSARYGNLTNSVLLLKTHQGRMPLSTSIRYNPKLKQYMLGKGFCISPQGHTLNLLADYTSQGDFHTGGIRLANLYHWLPA GKKLELSLTYTSRIGKEKQFVNEQNHTQRQRLDQRFSIQGEWQPDRRWLKKLSLRIDGSLQKSKQTKSQVNNASSQLYTD QKESGEWEAHVLSSNYMYTLVNESRPFYVETEMLASTSFPLRQRREISLAAGFSWRGEGNEGRGRDFDRQRPPSTSIRPR SFREIPSLHTFGGFIEATYRTPNLHVEAGLRNQGLKSRDYALIYQTEPRLNLLWSLCSSPSGYTLSLKAGVGWISFMPTL EKLYPEAIYNDKVSFYYNDSNESGNTLGILTTHAPGMERNMKLKPTVNRKIEVGLIGKTPAIRLDMTVFFEKQTDGFSSS AQYIPFSYREYDYLSTAQLRPEYKDGQVWVNGKAVPYQEKYSYTPVSVPVNTLHRKKHGIEMVADLGTFSPLRTSLIVDG IWLYVREKNTVLNGIWPIQYTDKTEYPYVGFYDRQGGPGNESRSEIISTNFRFITRIPRIGLVTTLTWQMIWLYKYRTLY NGSTGENVWPLYWCGTDGIIHPFTEAQKEDPAFAPLLSTTAPERFLPNSYKPYGMLNIRVNKAFGEHITLAFFANNLADL RPTRYSASTRSYLQQNTQPFFGLELQIKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94455; Mature: 94455
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYSTLYKIPIRIVTIFLLLSSLHPGNYLHGQEQPDTLSFYLPNILVTAIESKTPGTVSL CCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCEEEE LPASTLEHTQPITIADLTQLLPGGLTNNSGVTDAQYFSVREVSLKNGVNQFHKNAAMGAQ ECCCHHCCCCCEEHHHHHHHCCCCCCCCCCCCCHHEEEEEEEHHHHHHHHHHHHHCCCEE IWVDGSPLHFNTGINEPYEGYDARFLSLNQVKEAEIIRGIPSARYGNLTNSVLLLKTHQG EEECCCCEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCC RMPLSTSIRYNPKLKQYMLGKGFCISPQGHTLNLLADYTSQGDFHTGGIRLANLYHWLPA CCCCCCCEEECCCHHHHHCCCCEEECCCCCEEEEEEECCCCCCEECCCEEEEEHEEECCC GKKLELSLTYTSRIGKEKQFVNEQNHTQRQRLDQRFSIQGEWQPDRRWLKKLSLRIDGSL CCEEEEEEEEHHHCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEECCCH QKSKQTKSQVNNASSQLYTDQKESGEWEAHVLSSNYMYTLVNESRPFYVETEMLASTSFP HHHHHHHHHHHCCHHHHCCCCCCCCCEEEEEEECCEEEEEECCCCCEEEEHHHHHCCCCC LRQRREISLAAGFSWRGEGNEGRGRDFDRQRPPSTSIRPRSFREIPSLHTFGGFIEATYR CHHCCEEEEEECEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHCCCEEEEEEE TPNLHVEAGLRNQGLKSRDYALIYQTEPRLNLLWSLCSSPSGYTLSLKAGVGWISFMPTL CCCEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHH EKLYPEAIYNDKVSFYYNDSNESGNTLGILTTHAPGMERNMKLKPTVNRKIEVGLIGKTP HHHCHHHHCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCEEECCCCCCEEEEEEECCCC AIRLDMTVFFEKQTDGFSSSAQYIPFSYREYDYLSTAQLRPEYKDGQVWVNGKAVPYQEK EEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEHHHCCCCCCCCEEEECCCCCCCHHH YSYTPVSVPVNTLHRKKHGIEMVADLGTFSPLRTSLIVDGIWLYVREKNTVLNGIWPIQY CCCCCCCCCHHHHHHHHCCHHEEECCCCCCHHHHHHEEEEEEEEEEECCCEEECEEEEEE TDKTEYPYVGFYDRQGGPGNESRSEIISTNFRFITRIPRIGLVTTLTWQMIWLYKYRTLY CCCCCCCEEEEECCCCCCCCCHHHHHHHCCCEEEECCCCCCCHHHHHHHHHEEEHHHHEE NGSTGENVWPLYWCGTDGIIHPFTEAQKEDPAFAPLLSTTAPERFLPNSYKPYGMLNIRV CCCCCCCCCEEEEECCCCCCCCCHHCCCCCCCCCHHHHCCCCHHHCCCCCCCCEEEEEEE NKAFGEHITLAFFANNLADLRPTRYSASTRSYLQQNTQPFFGLELQIKL ECCCCCEEEEEEECCCHHHCCCCCCCHHHHHHHHHCCCCEEEEEEEEEC >Mature Secondary Structure MRYSTLYKIPIRIVTIFLLLSSLHPGNYLHGQEQPDTLSFYLPNILVTAIESKTPGTVSL CCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCEEEE LPASTLEHTQPITIADLTQLLPGGLTNNSGVTDAQYFSVREVSLKNGVNQFHKNAAMGAQ ECCCHHCCCCCEEHHHHHHHCCCCCCCCCCCCCHHEEEEEEEHHHHHHHHHHHHHCCCEE IWVDGSPLHFNTGINEPYEGYDARFLSLNQVKEAEIIRGIPSARYGNLTNSVLLLKTHQG EEECCCCEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCC RMPLSTSIRYNPKLKQYMLGKGFCISPQGHTLNLLADYTSQGDFHTGGIRLANLYHWLPA CCCCCCCEEECCCHHHHHCCCCEEECCCCCEEEEEEECCCCCCEECCCEEEEEHEEECCC GKKLELSLTYTSRIGKEKQFVNEQNHTQRQRLDQRFSIQGEWQPDRRWLKKLSLRIDGSL CCEEEEEEEEHHHCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEECCCH QKSKQTKSQVNNASSQLYTDQKESGEWEAHVLSSNYMYTLVNESRPFYVETEMLASTSFP HHHHHHHHHHHCCHHHHCCCCCCCCCEEEEEEECCEEEEEECCCCCEEEEHHHHHCCCCC LRQRREISLAAGFSWRGEGNEGRGRDFDRQRPPSTSIRPRSFREIPSLHTFGGFIEATYR CHHCCEEEEEECEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHCCCEEEEEEE TPNLHVEAGLRNQGLKSRDYALIYQTEPRLNLLWSLCSSPSGYTLSLKAGVGWISFMPTL CCCEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHH EKLYPEAIYNDKVSFYYNDSNESGNTLGILTTHAPGMERNMKLKPTVNRKIEVGLIGKTP HHHCHHHHCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCEEECCCCCCEEEEEEECCCC AIRLDMTVFFEKQTDGFSSSAQYIPFSYREYDYLSTAQLRPEYKDGQVWVNGKAVPYQEK EEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEHHHCCCCCCCCEEEECCCCCCCHHH YSYTPVSVPVNTLHRKKHGIEMVADLGTFSPLRTSLIVDGIWLYVREKNTVLNGIWPIQY CCCCCCCCCHHHHHHHHCCHHEEECCCCCCHHHHHHEEEEEEEEEEECCCEEECEEEEEE TDKTEYPYVGFYDRQGGPGNESRSEIISTNFRFITRIPRIGLVTTLTWQMIWLYKYRTLY CCCCCCCEEEEECCCCCCCCCHHHHHHHCCCEEEECCCCCCCHHHHHHHHHEEEHHHHEE NGSTGENVWPLYWCGTDGIIHPFTEAQKEDPAFAPLLSTTAPERFLPNSYKPYGMLNIRV CCCCCCCCCEEEEECCCCCCCCCHHCCCCCCCCCHHHHCCCCHHHCCCCCCCCEEEEEEE NKAFGEHITLAFFANNLADLRPTRYSASTRSYLQQNTQPFFGLELQIKL ECCCCCEEEEEEECCCHHHCCCCCCCHHHHHHHHHCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA