| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is menE [H]
Identifier: 150007781
GI number: 150007781
Start: 1314619
End: 1315686
Strand: Direct
Name: menE [H]
Synonym: BDI_1139
Alternate gene names: 150007781
Gene position: 1314619-1315686 (Clockwise)
Preceding gene: 150007780
Following gene: 150007782
Centisome position: 27.32
GC content: 57.58
Gene sequence:
>1068_bases ATGCCGATACAAGAAGATTTACAGGCATTCTTAGCTGAATGGCACGATCCCTCCCCTTTTCTGGAAGTCCAGACCTCCGG CTCCACCGGTACGCCCAAGCGGATGAGAGTGTGCAAGGACCGGATGCTGAACAGCGCCCGGCTTACCTGCGATTATCTGG GTCTTAAGAAGGGCGACAAGGCCCTGTTATGTATGCCCCTGCGCTATATAGCCGGAAAGATGATGGTGGTCCGCTCCCTA TACGCCGGACTGGATCTGGAGGTGCGTGAGCCCTCCGGACACCCGTTGGCGGATTGGGGGGATACGCCCCTGCGCTTTGC CGCCATGATCCCCTTGCAGGTTTACAATACGTTGCGAGTACCCGAGGAACGTAAACGGCTGGAGCAAACGGATATCCTGA TTATCGGCGGCGGGGCGATCGACGCGGCCTTGGAACAGGAGATACGGCAGATGCCAAACACGGTTTATTCCACCTACGGA ATGACGGAGACGCTGTCTCACGTCGCCCTGCGCCGGCTGAACGGGCCGGAAGCCTCGCCCTATTACCATCCCTTCCCCTC GGTGACGTTATCCTTGTCGCCGGACAATACCTTGGTGATAGACGCCCCATTGGTTTGCGACGAGCGGCTGGTGACGAACG ATGTCGCCCGCCTGCTGCCGGACGGGAGTTTCGCCATTATCGGAAGGAAAGATAATATCATCAATAGCGGAGGTATCAAG ATACAGATCGAGGAGGTGGAAGAGCGGCTACGGCCCTACCTAGACCTCCCCTATGCCATCACCGCCGCCCCCGACCCTCG GTTGGGAGAGGCGGTAGTCTTACTAATCGCCCCAAGGTCATGTGAAACGGTATCACCCCCTCGGGTGACACCACACATGA AAGCTATCATGAGCGACTCCGCGCAGCTATCATGTGAGGTATCGACAGTGGCTCTCGCCAGCCTGCCCAAGTACCTCCGT CCAAGGCACGTCATAGAGGCAAGCGAGATCCCCCAAACCGGAAGCGGCAAGATCGATCGTGCCGCCTGCCGGGAGCTAGC GAGAAATATCATCACAAAAACACTATAA
Upstream 100 bases:
>100_bases ACCGCAAGGTCTGGGAACCGGCGAGATTTTCAGGGATGATAAACATACGTTGATCCAACGAAAAGGAGACACCATCTGGT TCACTAACGACCTTTGACCT
Downstream 100 bases:
>100_bases ACATGAAAAGGATTCTAACAATCACCGCGGTCTCCCTATTGGCCTTATCGCCTATGTACGGGCAGGATTCTTGCCGATAC CCGCAAGATCCTACCTTGGA
Product: putative O-succinylbenzoate--CoA ligase
Products: NA
Alternate protein names: o-succinylbenzoyl-CoA synthetase; OSB-CoA synthetase [H]
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MPIQEDLQAFLAEWHDPSPFLEVQTSGSTGTPKRMRVCKDRMLNSARLTCDYLGLKKGDKALLCMPLRYIAGKMMVVRSL YAGLDLEVREPSGHPLADWGDTPLRFAAMIPLQVYNTLRVPEERKRLEQTDILIIGGGAIDAALEQEIRQMPNTVYSTYG MTETLSHVALRRLNGPEASPYYHPFPSVTLSLSPDNTLVIDAPLVCDERLVTNDVARLLPDGSFAIIGRKDNIINSGGIK IQIEEVEERLRPYLDLPYAITAAPDPRLGEAVVLLIAPRSCETVSPPRVTPHMKAIMSDSAQLSCEVSTVALASLPKYLR PRHVIEASEIPQTGSGKIDRAACRELARNIITKTL
Sequences:
>Translated_355_residues MPIQEDLQAFLAEWHDPSPFLEVQTSGSTGTPKRMRVCKDRMLNSARLTCDYLGLKKGDKALLCMPLRYIAGKMMVVRSL YAGLDLEVREPSGHPLADWGDTPLRFAAMIPLQVYNTLRVPEERKRLEQTDILIIGGGAIDAALEQEIRQMPNTVYSTYG MTETLSHVALRRLNGPEASPYYHPFPSVTLSLSPDNTLVIDAPLVCDERLVTNDVARLLPDGSFAIIGRKDNIINSGGIK IQIEEVEERLRPYLDLPYAITAAPDPRLGEAVVLLIAPRSCETVSPPRVTPHMKAIMSDSAQLSCEVSTVALASLPKYLR PRHVIEASEIPQTGSGKIDRAACRELARNIITKTL >Mature_354_residues PIQEDLQAFLAEWHDPSPFLEVQTSGSTGTPKRMRVCKDRMLNSARLTCDYLGLKKGDKALLCMPLRYIAGKMMVVRSLY AGLDLEVREPSGHPLADWGDTPLRFAAMIPLQVYNTLRVPEERKRLEQTDILIIGGGAIDAALEQEIRQMPNTVYSTYGM TETLSHVALRRLNGPEASPYYHPFPSVTLSLSPDNTLVIDAPLVCDERLVTNDVARLLPDGSFAIIGRKDNIINSGGIKI QIEEVEERLRPYLDLPYAITAAPDPRLGEAVVLLIAPRSCETVSPPRVTPHMKAIMSDSAQLSCEVSTVALASLPKYLRP RHVIEASEIPQTGSGKIDRAACRELARNIITKTL
Specific function: Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl- CoA (OSB-CoA) [H]
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788595, Length=238, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR010192 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.26 [H]
Molecular weight: Translated: 39238; Mature: 39107
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIQEDLQAFLAEWHDPSPFLEVQTSGSTGTPKRMRVCKDRMLNSARLTCDYLGLKKGDK CCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHEEEEEECCCCCCC ALLCMPLRYIAGKMMVVRSLYAGLDLEVREPSGHPLADWGDTPLRFAAMIPLQVYNTLRV EEEEECHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEHHEECHHHHHHHCCC PEERKRLEQTDILIIGGGAIDAALEQEIRQMPNTVYSTYGMTETLSHVALRRLNGPEASP CHHHHHHHHCCEEEEECCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHCCCCCCCC YYHPFPSVTLSLSPDNTLVIDAPLVCDERLVTNDVARLLPDGSFAIIGRKDNIINSGGIK CCCCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCEECCCCCE IQIEEVEERLRPYLDLPYAITAAPDPRLGEAVVLLIAPRSCETVSPPRVTPHMKAIMSDS EEHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHCCC AQLSCEVSTVALASLPKYLRPRHVIEASEIPQTGSGKIDRAACRELARNIITKTL CCEEEEHHHHHHHHHHHHHCCCCEECHHCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure PIQEDLQAFLAEWHDPSPFLEVQTSGSTGTPKRMRVCKDRMLNSARLTCDYLGLKKGDK CCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHEEEEEECCCCCCC ALLCMPLRYIAGKMMVVRSLYAGLDLEVREPSGHPLADWGDTPLRFAAMIPLQVYNTLRV EEEEECHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEHHEECHHHHHHHCCC PEERKRLEQTDILIIGGGAIDAALEQEIRQMPNTVYSTYGMTETLSHVALRRLNGPEASP CHHHHHHHHCCEEEEECCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHCCCCCCCC YYHPFPSVTLSLSPDNTLVIDAPLVCDERLVTNDVARLLPDGSFAIIGRKDNIINSGGIK CCCCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCEECCCCCE IQIEEVEERLRPYLDLPYAITAAPDPRLGEAVVLLIAPRSCETVSPPRVTPHMKAIMSDS EEHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHCCC AQLSCEVSTVALASLPKYLRPRHVIEASEIPQTGSGKIDRAACRELARNIITKTL CCEEEEHHHHHHHHHHHHHCCCCEECHHCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8626063; 9205837; 9278503 [H]