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The map label for this gene is yhaM [C]

Identifier: 150007772

GI number: 150007772

Start: 1303784

End: 1305076

Strand: Reverse

Name: yhaM [C]

Synonym: BDI_1130

Alternate gene names: 150007772

Gene position: 1305076-1303784 (Counterclockwise)

Preceding gene: 150007773

Following gene: 150007771

Centisome position: 27.12

GC content: 47.25

Gene sequence:

>1293_bases
ATGGATACTATCATAAAAACTCAAATTATAGATTTGATTCACAGGGAGGTAATCCCTGCTATCGGATGTACGGAACCTAT
TGCCGTGGCTTTGGCGGCCGCAAAAGCGGCAGAAGTGCTGGGGCGTAAGCCAGAGAAGATAGAGGTTTATCTGAGCGCCA
ATATCCTGAAGAATGCCATGGGAGTAGGAATCCCGGGGACTGGCATGGTGGGGTTGCCTATCGCTATCGCCTTGGGATCG
ATCATCGGTAAGTCCGCTTATGGGCTAGAGGTGCTGAAAGACTTGACTTCGGAGGGATTGAAAGAAGGTAAGGAAATGGT
CTGCAAGAAATGTATCGGTATAGACCTGAAAGAGAATGTAGATAAACTTTATATCGAAATTATAAGTTCAGCAGGGAACG
ATCGTTCAAGGGTGATCATTTGCCATGAGCATACCCATATAATATATGTAGAGAAAAACGGGGAGGTATTGACTGATTTA
CGTACGGCAAACGCTTCTGGCGAGGAAGTATGTGAGAATAAGGATTTACGTCTTTCCTTCTCTATGGTCTATGAGTTTGC
CATGGAAATGCCATTGGATGAGATTCGTTTTATTTTAGAAACAGCTGAGTTGAATAAGAAAGCCGCCCAAGCTTCCATGA
AAGGCAATTATGGACATACCGTAAGCAAGACGGTCTCGGGTGCTTTCGGCCGTAAGTTCATGGGAGATTCCGCTTATACG
CATATGTTGATCATGACTTCCGCCGCTTGCGACGCTCGCATGGATGGCGCTATGATCCCGGTGATGAGTAATTCGGGAAG
CGGTAATCAAGGAATCGCCGCTACGCTTCCGGTTCTTTCTTTCGCCGAGGATATCCAATGCTCGGAAGAGCAACTGATCC
GTGCGTTGATGTTAAGCCATTTGATGGTGATCTATATCAAGCAAAGTCTGGGACGCTTGTCCGCCCTTTGCGGTTGTGTG
GTTGCCGCTACGGGAGCGAGTTGCGCTATCACCTATTTGATGGGAGGAAATAAGGCGCGGATTTCTTATGCGATCAAGAA
TATGATCGGTAATATTACCGGAATGATCTGTGACGGTGCCAAGCCGAGTTGTGCGATGAAAGTATCTAGTGGCGTATCTA
CGGCGATGCTTTCCGCTTTGATGGCCATGGAGGATAAGGTGGTGACTTCCGTGGAAGGTATCATCGATGAGGATGTGGAT
AAATCGATCGCGAACTTGACCGCTATCGGTTCTAAAGGAATGGAGGCGACGGATCGTCTGGTGCTGGACATCATGACCGG
TAAATCTTGTTAA

Upstream 100 bases:

>100_bases
CATTGGGAAAACAATACGATGCCTTGCGAGATATCGTTGTTGAGTTTTGTTCTTAATCTATTGTATATTAACTATCTAAT
TCTAAATAAAGACTATCAGT

Downstream 100 bases:

>100_bases
TGGGATTCTATGGAGGAGGCACCAAAGGCGAGGAAAAAAGAGATTATGCGAGTGACACTTTTAGGGTCATTCGCTAATTT
TGTTTTATTGGTATTCAAGT

Product: putative inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MDTIIKTQIIDLIHREVIPAIGCTEPIAVALAAAKAAEVLGRKPEKIEVYLSANILKNAMGVGIPGTGMVGLPIAIALGS
IIGKSAYGLEVLKDLTSEGLKEGKEMVCKKCIGIDLKENVDKLYIEIISSAGNDRSRVIICHEHTHIIYVEKNGEVLTDL
RTANASGEEVCENKDLRLSFSMVYEFAMEMPLDEIRFILETAELNKKAAQASMKGNYGHTVSKTVSGAFGRKFMGDSAYT
HMLIMTSAACDARMDGAMIPVMSNSGSGNQGIAATLPVLSFAEDIQCSEEQLIRALMLSHLMVIYIKQSLGRLSALCGCV
VAATGASCAITYLMGGNKARISYAIKNMIGNITGMICDGAKPSCAMKVSSGVSTAMLSALMAMEDKVVTSVEGIIDEDVD
KSIANLTAIGSKGMEATDRLVLDIMTGKSC

Sequences:

>Translated_430_residues
MDTIIKTQIIDLIHREVIPAIGCTEPIAVALAAAKAAEVLGRKPEKIEVYLSANILKNAMGVGIPGTGMVGLPIAIALGS
IIGKSAYGLEVLKDLTSEGLKEGKEMVCKKCIGIDLKENVDKLYIEIISSAGNDRSRVIICHEHTHIIYVEKNGEVLTDL
RTANASGEEVCENKDLRLSFSMVYEFAMEMPLDEIRFILETAELNKKAAQASMKGNYGHTVSKTVSGAFGRKFMGDSAYT
HMLIMTSAACDARMDGAMIPVMSNSGSGNQGIAATLPVLSFAEDIQCSEEQLIRALMLSHLMVIYIKQSLGRLSALCGCV
VAATGASCAITYLMGGNKARISYAIKNMIGNITGMICDGAKPSCAMKVSSGVSTAMLSALMAMEDKVVTSVEGIIDEDVD
KSIANLTAIGSKGMEATDRLVLDIMTGKSC
>Mature_430_residues
MDTIIKTQIIDLIHREVIPAIGCTEPIAVALAAAKAAEVLGRKPEKIEVYLSANILKNAMGVGIPGTGMVGLPIAIALGS
IIGKSAYGLEVLKDLTSEGLKEGKEMVCKKCIGIDLKENVDKLYIEIISSAGNDRSRVIICHEHTHIIYVEKNGEVLTDL
RTANASGEEVCENKDLRLSFSMVYEFAMEMPLDEIRFILETAELNKKAAQASMKGNYGHTVSKTVSGAFGRKFMGDSAYT
HMLIMTSAACDARMDGAMIPVMSNSGSGNQGIAATLPVLSFAEDIQCSEEQLIRALMLSHLMVIYIKQSLGRLSALCGCV
VAATGASCAITYLMGGNKARISYAIKNMIGNITGMICDGAKPSCAMKVSSGVSTAMLSALMAMEDKVVTSVEGIIDEDVD
KSIANLTAIGSKGMEATDRLVLDIMTGKSC

Specific function: Unknown

COG id: COG3681

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0597 family

Homologues:

Organism=Escherichia coli, GI48994923, Length=419, Percent_Identity=44.1527446300716, Blast_Score=318, Evalue=3e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1130_PARD8 (A6LB29)

Other databases:

- EMBL:   CP000140
- RefSeq:   YP_001302515.1
- STRING:   A6LB29
- GeneID:   5306283
- GenomeReviews:   CP000140_GR
- KEGG:   pdi:BDI_1130
- eggNOG:   COG3681
- HOGENOM:   HBG296671
- OMA:   PVMSNSG
- ProtClustDB:   CLSK823011
- BioCyc:   PDIS435591:BDI_1130-MONOMER
- HAMAP:   MF_01845
- InterPro:   IPR005130
- InterPro:   IPR021144
- PIRSF:   PIRSF006054

Pfam domain/function: PF03313 SDH_alpha

EC number: NA

Molecular weight: Translated: 45713; Mature: 45713

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS00022 EGF_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTIIKTQIIDLIHREVIPAIGCTEPIAVALAAAKAAEVLGRKPEKIEVYLSANILKNAM
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHH
GVGIPGTGMVGLPIAIALGSIIGKSAYGLEVLKDLTSEGLKEGKEMVCKKCIGIDLKENV
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
DKLYIEIISSAGNDRSRVIICHEHTHIIYVEKNGEVLTDLRTANASGEEVCENKDLRLSF
HHHHHHHHHCCCCCCCEEEEEECCEEEEEEECCCCEEEEEHHCCCCHHHHHCCCCCEEHH
SMVYEFAMEMPLDEIRFILETAELNKKAAQASMKGNYGHTVSKTVSGAFGRKFMGDSAYT
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHH
HMLIMTSAACDARMDGAMIPVMSNSGSGNQGIAATLPVLSFAEDIQCSEEQLIRALMLSH
EEEEEEHHHCCCCCCCCEEEEEECCCCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHH
LMVIYIKQSLGRLSALCGCVVAATGASCAITYLMGGNKARISYAIKNMIGNITGMICDGA
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCHHEEEECCC
KPSCAMKVSSGVSTAMLSALMAMEDKVVTSVEGIIDEDVDKSIANLTAIGSKGMEATDRL
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHE
VLDIMTGKSC
EEEECCCCCC
>Mature Secondary Structure
MDTIIKTQIIDLIHREVIPAIGCTEPIAVALAAAKAAEVLGRKPEKIEVYLSANILKNAM
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHH
GVGIPGTGMVGLPIAIALGSIIGKSAYGLEVLKDLTSEGLKEGKEMVCKKCIGIDLKENV
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
DKLYIEIISSAGNDRSRVIICHEHTHIIYVEKNGEVLTDLRTANASGEEVCENKDLRLSF
HHHHHHHHHCCCCCCCEEEEEECCEEEEEEECCCCEEEEEHHCCCCHHHHHCCCCCEEHH
SMVYEFAMEMPLDEIRFILETAELNKKAAQASMKGNYGHTVSKTVSGAFGRKFMGDSAYT
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHH
HMLIMTSAACDARMDGAMIPVMSNSGSGNQGIAATLPVLSFAEDIQCSEEQLIRALMLSH
EEEEEEHHHCCCCCCCCEEEEEECCCCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHH
LMVIYIKQSLGRLSALCGCVVAATGASCAITYLMGGNKARISYAIKNMIGNITGMICDGA
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCHHEEEECCC
KPSCAMKVSSGVSTAMLSALMAMEDKVVTSVEGIIDEDVDKSIANLTAIGSKGMEATDRL
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHE
VLDIMTGKSC
EEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA