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The map label for this gene is ydfM [H]

Identifier: 150007771

GI number: 150007771

Start: 1302872

End: 1303738

Strand: Reverse

Name: ydfM [H]

Synonym: BDI_1129

Alternate gene names: 150007771

Gene position: 1303738-1302872 (Counterclockwise)

Preceding gene: 150007772

Following gene: 150007770

Centisome position: 27.1

GC content: 45.79

Gene sequence:

>867_bases
ATGCGAGTGACACTTTTAGGGTCATTCGCTAATTTTGTTTTATTGGTATTCAAGTTCGTGGCGGGTATCTGGGGGCATAG
TAGCGCTATGATCGCCGATGCGGTACATTCGTTATCTGATTTCGTAACGGATATAATCGTACTTCTTTTTGTCAATATAT
CTTCCAAGCCAAAGGACGAGAGCCATGATTACGGGCATGGTAAATACGAGACTTTGGCGACTTCAATTGTTGGTATCGTC
TTGCTTTGTGTAGGTTTTGGCCTTTTCTGGGAGGGAGCGAACAAGATTTATGACTTTTATTTCAAGGGGATTCCGTTGGA
AAGTCCGGGAATGATCGCTTTAGTTGCCGCTCTTATCTCCATTGTGATCAAGGAATTACTGTATCATATTACGGTTTGGG
TAGGAAGGAAGCAGAATAGTCAAGTCGTTATCGCTAACGCTTGGCATCATCGCTCGGATGCCTTTTCCTCGATCGGTACG
GCTTTAGGTATCGGAGGGGCGATTTTGTTGGGGGATAATTGGCGTGTGCTGGACCCGTTGGCGGCTGTGATTGTCAGTTT
ATTTATCGTAAAAGTAGCCTTACAACTAGTGATCCCGGCGATTAATGACTTATTGGAGAAATCTTTGCCGAAGGAGGTGG
AGGATGAGATCTTGGCGATCATTAGTGAGATTCCCGAGGTAAAGAGCCCGCATAATCTACGTACCCGCCGCATCGGTAAT
AATTTTGCTATCGAGGCGCATATACGGGTGGACGGACAGATAACCGTGACTCGTGCCCATGACTTGACGAAAGAGATCGA
ACAGAATCTGCGTGATAAGTTCGGTCAGGCTACGCACATCGCTTTGCACGTGGAACCAATTAAATAA

Upstream 100 bases:

>100_bases
AATGGAGGCGACGGATCGTCTGGTGCTGGACATCATGACCGGTAAATCTTGTTAATGGGATTCTATGGAGGAGGCACCAA
AGGCGAGGAAAAAAGAGATT

Downstream 100 bases:

>100_bases
ACGAATTGTTATTTGACCATGATGAAGAACTTATATAGGGGAGAAGTGCTCTATTTGATCGCTTCCCCGCTGGATCATGT
GGAGGCTTACCGCTATTTTG

Product: cation efflux system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MRVTLLGSFANFVLLVFKFVAGIWGHSSAMIADAVHSLSDFVTDIIVLLFVNISSKPKDESHDYGHGKYETLATSIVGIV
LLCVGFGLFWEGANKIYDFYFKGIPLESPGMIALVAALISIVIKELLYHITVWVGRKQNSQVVIANAWHHRSDAFSSIGT
ALGIGGAILLGDNWRVLDPLAAVIVSLFIVKVALQLVIPAINDLLEKSLPKEVEDEILAIISEIPEVKSPHNLRTRRIGN
NFAIEAHIRVDGQITVTRAHDLTKEIEQNLRDKFGQATHIALHVEPIK

Sequences:

>Translated_288_residues
MRVTLLGSFANFVLLVFKFVAGIWGHSSAMIADAVHSLSDFVTDIIVLLFVNISSKPKDESHDYGHGKYETLATSIVGIV
LLCVGFGLFWEGANKIYDFYFKGIPLESPGMIALVAALISIVIKELLYHITVWVGRKQNSQVVIANAWHHRSDAFSSIGT
ALGIGGAILLGDNWRVLDPLAAVIVSLFIVKVALQLVIPAINDLLEKSLPKEVEDEILAIISEIPEVKSPHNLRTRRIGN
NFAIEAHIRVDGQITVTRAHDLTKEIEQNLRDKFGQATHIALHVEPIK
>Mature_288_residues
MRVTLLGSFANFVLLVFKFVAGIWGHSSAMIADAVHSLSDFVTDIIVLLFVNISSKPKDESHDYGHGKYETLATSIVGIV
LLCVGFGLFWEGANKIYDFYFKGIPLESPGMIALVAALISIVIKELLYHITVWVGRKQNSQVVIANAWHHRSDAFSSIGT
ALGIGGAILLGDNWRVLDPLAAVIVSLFIVKVALQLVIPAINDLLEKSLPKEVEDEILAIISEIPEVKSPHNLRTRRIGN
NFAIEAHIRVDGQITVTRAHDLTKEIEQNLRDKFGQATHIALHVEPIK

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=276, Percent_Identity=27.8985507246377, Blast_Score=121, Evalue=5e-29,
Organism=Escherichia coli, GI1786966, Length=284, Percent_Identity=27.4647887323944, Blast_Score=69, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI115534117, Length=273, Percent_Identity=23.4432234432234, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6325032, Length=229, Percent_Identity=32.3144104803493, Blast_Score=113, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6323831, Length=230, Percent_Identity=30, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 31714; Mature: 31714

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVTLLGSFANFVLLVFKFVAGIWGHSSAMIADAVHSLSDFVTDIIVLLFVNISSKPKDE
CEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SHDYGHGKYETLATSIVGIVLLCVGFGLFWEGANKIYDFYFKGIPLESPGMIALVAALIS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCHHHHHHHHHH
IVIKELLYHITVWVGRKQNSQVVIANAWHHRSDAFSSIGTALGIGGAILLGDNWRVLDPL
HHHHHHHHHHHHHEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHH
AAVIVSLFIVKVALQLVIPAINDLLEKSLPKEVEDEILAIISEIPEVKSPHNLRTRRIGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCC
NFAIEAHIRVDGQITVTRAHDLTKEIEQNLRDKFGQATHIALHVEPIK
CEEEEEEEEECCEEEEEHHHHHHHHHHHHHHHHCCCEEEEEEEEEECC
>Mature Secondary Structure
MRVTLLGSFANFVLLVFKFVAGIWGHSSAMIADAVHSLSDFVTDIIVLLFVNISSKPKDE
CEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SHDYGHGKYETLATSIVGIVLLCVGFGLFWEGANKIYDFYFKGIPLESPGMIALVAALIS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCHHHHHHHHHH
IVIKELLYHITVWVGRKQNSQVVIANAWHHRSDAFSSIGTALGIGGAILLGDNWRVLDPL
HHHHHHHHHHHHHEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHH
AAVIVSLFIVKVALQLVIPAINDLLEKSLPKEVEDEILAIISEIPEVKSPHNLRTRRIGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCC
NFAIEAHIRVDGQITVTRAHDLTKEIEQNLRDKFGQATHIALHVEPIK
CEEEEEEEEECCEEEEEHHHHHHHHHHHHHHHHCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]