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The map label for this gene is ydfG [C]

Identifier: 150007726

GI number: 150007726

Start: 1257310

End: 1258041

Strand: Reverse

Name: ydfG [C]

Synonym: BDI_1081

Alternate gene names: 150007726

Gene position: 1258041-1257310 (Counterclockwise)

Preceding gene: 150007731

Following gene: 150007724

Centisome position: 26.15

GC content: 45.9

Gene sequence:

>732_bases
ATGGTCAAACGAATTATCATTATTGGCGCTACCTCCGGTATCGGCTATGAGGTTGCTAAGATTTATTGGAAACGAGGATA
TCAACTGGGATTGGCTGGCCGTCGGGTTGATCGGTTGGAGGAGTTTCGTAAGCAAGATCCGGAGCATATCCGGATAAAGC
AGTTGGACGTGACCGCCGAGGATGCCGCTGATCGTTTAGACGAATTAATCCGTGATTTAGGAGGAATGGACATCTTCCTG
CTTAGTTCAGGGATCGGCAACCAGAATAAATACTTAGATACTTCCATTGAACAAGCTACGATACAGACGAATGTGACGGG
TTTTACACGTATGGTACTAGCTGCTTATCGTTATTTTTCCAGTCAAGGTGGTGGGCATATATCTGTAATCAGCTCTATTG
CCGGAACCAAAGGATTAGGTGTCGCTCCCTCCTACTCGGCTACCAAACGATACCAAAATATTTATATAGACGCTTTAGCC
CAACTTTCCCGTATGGAGAAACAGCCTATTACATTTACGGATATCCGTCCGGGATTTGTCCGTACGGATTTATTGAAAGA
CGGCAGGAATTATCCTATGCTGATGTCTCCCCAATACGCCGCCTTGCGTATCGCTAACGCTATAGACCGGAAAAAGAGAA
GGGCGATCATCGATTGGAGATACGCTATCCTTGTCTTTTTCTGGAGACTGATCCCTGAATGGCTTTGGGAATGGCTGCCA
ATACGGAATTAG

Upstream 100 bases:

>100_bases
TCATGGATTTATGTGTTAAATTTAAAAGATGGGTGACAAAGATAGAGCTTAGTATGAGAATTTTGTTTATCTTTATTGTT
AATTTATTGTATCAAGTATT

Downstream 100 bases:

>100_bases
GATCGGGTATGTTAGAGATTTATCTTTTTTGCTTCTACATTAGATTTTCTCTTGCGCCGGGAGCATGCTGAAGGACTGCG
CCGACTATCTGGCAACTATC

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MVKRIIIIGATSGIGYEVAKIYWKRGYQLGLAGRRVDRLEEFRKQDPEHIRIKQLDVTAEDAADRLDELIRDLGGMDIFL
LSSGIGNQNKYLDTSIEQATIQTNVTGFTRMVLAAYRYFSSQGGGHISVISSIAGTKGLGVAPSYSATKRYQNIYIDALA
QLSRMEKQPITFTDIRPGFVRTDLLKDGRNYPMLMSPQYAALRIANAIDRKKRRAIIDWRYAILVFFWRLIPEWLWEWLP
IRN

Sequences:

>Translated_243_residues
MVKRIIIIGATSGIGYEVAKIYWKRGYQLGLAGRRVDRLEEFRKQDPEHIRIKQLDVTAEDAADRLDELIRDLGGMDIFL
LSSGIGNQNKYLDTSIEQATIQTNVTGFTRMVLAAYRYFSSQGGGHISVISSIAGTKGLGVAPSYSATKRYQNIYIDALA
QLSRMEKQPITFTDIRPGFVRTDLLKDGRNYPMLMSPQYAALRIANAIDRKKRRAIIDWRYAILVFFWRLIPEWLWEWLP
IRN
>Mature_243_residues
MVKRIIIIGATSGIGYEVAKIYWKRGYQLGLAGRRVDRLEEFRKQDPEHIRIKQLDVTAEDAADRLDELIRDLGGMDIFL
LSSGIGNQNKYLDTSIEQATIQTNVTGFTRMVLAAYRYFSSQGGGHISVISSIAGTKGLGVAPSYSATKRYQNIYIDALA
QLSRMEKQPITFTDIRPGFVRTDLLKDGRNYPMLMSPQYAALRIANAIDRKKRRAIIDWRYAILVFFWRLIPEWLWEWLP
IRN

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI20149619, Length=263, Percent_Identity=27.7566539923954, Blast_Score=88, Evalue=7e-18,
Organism=Homo sapiens, GI7706318, Length=257, Percent_Identity=23.3463035019455, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI40254992, Length=191, Percent_Identity=29.3193717277487, Blast_Score=68, Evalue=6e-12,
Organism=Escherichia coli, GI1787820, Length=180, Percent_Identity=27.2222222222222, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17563726, Length=221, Percent_Identity=23.9819004524887, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI72000259, Length=194, Percent_Identity=25.7731958762887, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI116007236, Length=226, Percent_Identity=32.7433628318584, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI21358495, Length=259, Percent_Identity=24.7104247104247, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28571387, Length=196, Percent_Identity=31.1224489795918, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI23397609, Length=188, Percent_Identity=28.7234042553192, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI281364494, Length=200, Percent_Identity=29.5, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24580925, Length=198, Percent_Identity=25.7575757575758, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI116007238, Length=179, Percent_Identity=31.8435754189944, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24641232, Length=199, Percent_Identity=30.1507537688442, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24663911, Length=224, Percent_Identity=27.2321428571429, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27853; Mature: 27853

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKRIIIIGATSGIGYEVAKIYWKRGYQLGLAGRRVDRLEEFRKQDPEHIRIKQLDVTAE
CCEEEEEEECCCCCCHHHHHHHHHCCCEECCCCHHHHHHHHHHHCCCCEEEEEEECCCHH
DAADRLDELIRDLGGMDIFLLSSGIGNQNKYLDTSIEQATIQTNVTGFTRMVLAAYRYFS
HHHHHHHHHHHHHCCCEEEEEECCCCCCCCEECCCHHHHHHCCCCHHHHHHHHHHHHHHH
SQGGGHISVISSIAGTKGLGVAPSYSATKRYQNIYIDALAQLSRMEKQPITFTDIRPGFV
CCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHH
RTDLLKDGRNYPMLMSPQYAALRIANAIDRKKRRAIIDWRYAILVFFWRLIPEWLWEWLP
HHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IRN
CCC
>Mature Secondary Structure
MVKRIIIIGATSGIGYEVAKIYWKRGYQLGLAGRRVDRLEEFRKQDPEHIRIKQLDVTAE
CCEEEEEEECCCCCCHHHHHHHHHCCCEECCCCHHHHHHHHHHHCCCCEEEEEEECCCHH
DAADRLDELIRDLGGMDIFLLSSGIGNQNKYLDTSIEQATIQTNVTGFTRMVLAAYRYFS
HHHHHHHHHHHHHCCCEEEEEECCCCCCCCEECCCHHHHHHCCCCHHHHHHHHHHHHHHH
SQGGGHISVISSIAGTKGLGVAPSYSATKRYQNIYIDALAQLSRMEKQPITFTDIRPGFV
CCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHH
RTDLLKDGRNYPMLMSPQYAALRIANAIDRKKRRAIIDWRYAILVFFWRLIPEWLWEWLP
HHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IRN
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]