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The map label for this gene is tldD [H]

Identifier: 150007566

GI number: 150007566

Start: 1054510

End: 1056042

Strand: Reverse

Name: tldD [H]

Synonym: BDI_0919

Alternate gene names: 150007566

Gene position: 1056042-1054510 (Counterclockwise)

Preceding gene: 150007567

Following gene: 150007565

Centisome position: 21.95

GC content: 50.62

Gene sequence:

>1533_bases
ATGAATATTAACAGACGTGATTTCATTAAAACAGGAGGTATGGTTATGCTTGGAACATTAGCGGCTCCTTCCTTACTAGG
AAGTTGCACCGGTAGTGAGGGGGATAAAGCAGCCGGTATTTCATTCGCCATGAATTATTTCAAGGTGAGTGAGGGGGATT
TGAGGAAGGTATTGGCGGCAGCCTTGGAGAAAGGCGGGGATTATGCCGATTTGTTTTTCGAGCATTCATACAGGAACAAC
GTGGGGTTGCAGGATGGTGCCGTAAACCGTGCCTCATCCAACATCGATTTTGGGATGGGCGTACGAGTCTTGGCTGGTGA
CCAAACGGGATACGCCTACGTAGAGAACGTTACCTTAGACGAGATGCTGAAGGCGGCTCGCACGGCCGCACGGATCGCCA
CCGGATCGGCGAACACCACCGCAATAAACCTGACGGAAAAAGCGTGTACGAACAATTTCTATAACGTACAAACACCTTGG
GACGAGATAGCCATTAATGACAAGATGCCTTTCTTGCAGAAACTGAACGATCAGATATTCGCAAAGGACAAGCGGGTCAC
CAAGGTGATGGCCTCTTTGGGAGACACGACCTCTCATATCTTATTCTGTAACTCGGAAGGGCAGATTTATTACGATTATC
GCCCGATGAGCGCCTTGAGCGCCGTCTGCATCATGGAGGATAACGGGAAGATCGAGAACTCGTACGCCGCACGGGCTTTT
CGTATGGGAGCGGAATTCCTGACGGACGACCTGATCAACGAGCTTGCCCAAGAGGCAGTGGATAAGACCTCTATCTTATT
TCAGGCGATCAAGCCAAAAGGCGGGGAAATGCCTGTTGTCATGGGTGCCGGTGGCTCTGGCATCTTATTGCACGAGGCGA
TCGGCCATGCTTTCGAGGCGGATTTCAACCGTAAGAACACCTCTATTTTCTCCGATCAGCTGAACAAGAAAGTTTGCAAC
GAGCATATCAACGTGGTGGACGACGGCACGATTCCTTTCAACCGGGGCTCGGTCAATATCGATGACGAGGGTGTGGACGG
ACAAAAAACCTATATCGTACGGGAGGGAGTCTTGACCAGTTATCTGCACGATCGTATCAGCGCAAAACATTACGGCATCC
CCTCTACGGGCAATGGCCGCCGGGAGTCTTTCCGTCAGATGCCTATCCCCCGTATGCGTGCCACTTATATGGAAGCGGGC
AACGTGACGGAAGAGGAGATCATCTCTACCGTAAAGAAAGGTATCTATGCCGCCAACTTCACGAACGGGCAGGTACAGAT
TGGCGCAGGCGATTTTACCTTCTTCGTGAAGGATGGTTACTTGATCGAGAACGGCAAGCTCACCCAACCTATCAAGGATA
TCAATATCATCGGTAACGGCCCGAAAGCGTTGGCGGATATCACGATGGTGGGTAATAATTATAAAATGGATAACGGCACA
TGGACCTGCGGTAAGGATGGACAGTCTTGCCCGGTAACCTGCGGTATGCCGTCGGCCTTAGTCAGCAAACTTACAGTAGG
AGGAGAAAACTAA

Upstream 100 bases:

>100_bases
TTCTTCAAGCATGTAGCTCCTTACATGGATTTTATGAAAAAAGAGTTATTGAATCAACGTCCACCCGCAAACGTGATGGA
TTGGGCTAAACAACAACAAC

Downstream 100 bases:

>100_bases
TATGATAACAAACGAAAATAAGAAATTGGCTCAATGGGCCATGGAATATGCCTTGAAGAATGGTTGTCAGTCTTCACGTG
TCACGCTTTACAATGGTTCC

Product: putative modulator of DNA gyrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MNINRRDFIKTGGMVMLGTLAAPSLLGSCTGSEGDKAAGISFAMNYFKVSEGDLRKVLAAALEKGGDYADLFFEHSYRNN
VGLQDGAVNRASSNIDFGMGVRVLAGDQTGYAYVENVTLDEMLKAARTAARIATGSANTTAINLTEKACTNNFYNVQTPW
DEIAINDKMPFLQKLNDQIFAKDKRVTKVMASLGDTTSHILFCNSEGQIYYDYRPMSALSAVCIMEDNGKIENSYAARAF
RMGAEFLTDDLINELAQEAVDKTSILFQAIKPKGGEMPVVMGAGGSGILLHEAIGHAFEADFNRKNTSIFSDQLNKKVCN
EHINVVDDGTIPFNRGSVNIDDEGVDGQKTYIVREGVLTSYLHDRISAKHYGIPSTGNGRRESFRQMPIPRMRATYMEAG
NVTEEEIISTVKKGIYAANFTNGQVQIGAGDFTFFVKDGYLIENGKLTQPIKDINIIGNGPKALADITMVGNNYKMDNGT
WTCGKDGQSCPVTCGMPSALVSKLTVGGEN

Sequences:

>Translated_510_residues
MNINRRDFIKTGGMVMLGTLAAPSLLGSCTGSEGDKAAGISFAMNYFKVSEGDLRKVLAAALEKGGDYADLFFEHSYRNN
VGLQDGAVNRASSNIDFGMGVRVLAGDQTGYAYVENVTLDEMLKAARTAARIATGSANTTAINLTEKACTNNFYNVQTPW
DEIAINDKMPFLQKLNDQIFAKDKRVTKVMASLGDTTSHILFCNSEGQIYYDYRPMSALSAVCIMEDNGKIENSYAARAF
RMGAEFLTDDLINELAQEAVDKTSILFQAIKPKGGEMPVVMGAGGSGILLHEAIGHAFEADFNRKNTSIFSDQLNKKVCN
EHINVVDDGTIPFNRGSVNIDDEGVDGQKTYIVREGVLTSYLHDRISAKHYGIPSTGNGRRESFRQMPIPRMRATYMEAG
NVTEEEIISTVKKGIYAANFTNGQVQIGAGDFTFFVKDGYLIENGKLTQPIKDINIIGNGPKALADITMVGNNYKMDNGT
WTCGKDGQSCPVTCGMPSALVSKLTVGGEN
>Mature_510_residues
MNINRRDFIKTGGMVMLGTLAAPSLLGSCTGSEGDKAAGISFAMNYFKVSEGDLRKVLAAALEKGGDYADLFFEHSYRNN
VGLQDGAVNRASSNIDFGMGVRVLAGDQTGYAYVENVTLDEMLKAARTAARIATGSANTTAINLTEKACTNNFYNVQTPW
DEIAINDKMPFLQKLNDQIFAKDKRVTKVMASLGDTTSHILFCNSEGQIYYDYRPMSALSAVCIMEDNGKIENSYAARAF
RMGAEFLTDDLINELAQEAVDKTSILFQAIKPKGGEMPVVMGAGGSGILLHEAIGHAFEADFNRKNTSIFSDQLNKKVCN
EHINVVDDGTIPFNRGSVNIDDEGVDGQKTYIVREGVLTSYLHDRISAKHYGIPSTGNGRRESFRQMPIPRMRATYMEAG
NVTEEEIISTVKKGIYAANFTNGQVQIGAGDFTFFVKDGYLIENGKLTQPIKDINIIGNGPKALADITMVGNNYKMDNGT
WTCGKDGQSCPVTCGMPSALVSKLTVGGEN

Specific function: Suppresses the inhibitory activity of the carbon storage regulator (CsrA) [H]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U62 family [H]

Homologues:

Organism=Escherichia coli, GI1789640, Length=464, Percent_Identity=41.5948275862069, Blast_Score=359, Evalue=1e-100,
Organism=Escherichia coli, GI1790682, Length=430, Percent_Identity=21.3953488372093, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002510 [H]

Pfam domain/function: PF01523 PmbA_TldD [H]

EC number: NA

Molecular weight: Translated: 55372; Mature: 55372

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINRRDFIKTGGMVMLGTLAAPSLLGSCTGSEGDKAAGISFAMNYFKVSEGDLRKVLAA
CCCCHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCCCCCHHHEEHEEECCCHHHHHHHHH
ALEKGGDYADLFFEHSYRNNVGLQDGAVNRASSNIDFGMGVRVLAGDQTGYAYVENVTLD
HHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCHH
EMLKAARTAARIATGSANTTAINLTEKACTNNFYNVQTPWDEIAINDKMPFLQKLNDQIF
HHHHHHHHHHHHCCCCCCCEEEEEEHHHHCCCCEECCCCHHHEEECCCCHHHHHHCHHHH
AKDKRVTKVMASLGDTTSHILFCNSEGQIYYDYRPMSALSAVCIMEDNGKIENSYAARAF
HHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCHHHHEEEEEEECCCCCCCHHHHHHH
RMGAEFLTDDLINELAQEAVDKTSILFQAIKPKGGEMPVVMGAGGSGILLHEAIGHAFEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCEEHHHHHCHHHHC
DFNRKNTSIFSDQLNKKVCNEHINVVDDGTIPFNRGSVNIDDEGVDGQKTYIVREGVLTS
CCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEECCCCCCCCCEEEEEECHHHHH
YLHDRISAKHYGIPSTGNGRRESFRQMPIPRMRATYMEAGNVTEEEIISTVKKGIYAANF
HHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCEEEEEC
TNGQVQIGAGDFTFFVKDGYLIENGKLTQPIKDINIIGNGPKALADITMVGNNYKMDNGT
CCCEEEECCCCEEEEEECCEEEECCCCCCCCCEEEEECCCCHHEEEEEEECCCEEECCCE
WTCGKDGQSCPVTCGMPSALVSKLTVGGEN
EEECCCCCCCCEECCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MNINRRDFIKTGGMVMLGTLAAPSLLGSCTGSEGDKAAGISFAMNYFKVSEGDLRKVLAA
CCCCHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCCCCCHHHEEHEEECCCHHHHHHHHH
ALEKGGDYADLFFEHSYRNNVGLQDGAVNRASSNIDFGMGVRVLAGDQTGYAYVENVTLD
HHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCHH
EMLKAARTAARIATGSANTTAINLTEKACTNNFYNVQTPWDEIAINDKMPFLQKLNDQIF
HHHHHHHHHHHHCCCCCCCEEEEEEHHHHCCCCEECCCCHHHEEECCCCHHHHHHCHHHH
AKDKRVTKVMASLGDTTSHILFCNSEGQIYYDYRPMSALSAVCIMEDNGKIENSYAARAF
HHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCHHHHEEEEEEECCCCCCCHHHHHHH
RMGAEFLTDDLINELAQEAVDKTSILFQAIKPKGGEMPVVMGAGGSGILLHEAIGHAFEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCEEHHHHHCHHHHC
DFNRKNTSIFSDQLNKKVCNEHINVVDDGTIPFNRGSVNIDDEGVDGQKTYIVREGVLTS
CCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEECCCCCCCCCEEEEEECHHHHH
YLHDRISAKHYGIPSTGNGRRESFRQMPIPRMRATYMEAGNVTEEEIISTVKKGIYAANF
HHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCEEEEEC
TNGQVQIGAGDFTFFVKDGYLIENGKLTQPIKDINIIGNGPKALADITMVGNNYKMDNGT
CCCEEEECCCCEEEEEECCEEEECCCCCCCCCEEEEECCCCHHEEEEEEECCCEEECCCE
WTCGKDGQSCPVTCGMPSALVSKLTVGGEN
EEECCCCCCCCEECCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]