| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150007558
Identifier: 150007558
GI number: 150007558
Start: 1044497
End: 1045804
Strand: Reverse
Name: 150007558
Synonym: BDI_0911
Alternate gene names: NA
Gene position: 1045804-1044497 (Counterclockwise)
Preceding gene: 150007559
Following gene: 150007546
Centisome position: 21.74
GC content: 39.14
Gene sequence:
>1308_bases ATGGCTACATTCAAATTTTTAGTACTCCCGCATCAACGGAAAGAGGATGGTACATATAACGTAAAAATCCGTATAACACA GAAAGGCAAGTCCAAATACATCAAGACCAGCCACAATGTGTCAGTTTCAGATATTATAAAAAAGAAAGACAACGGAAAAG AAAAAATCAAGATCAAGAATCAAGCCGTAATCGACCTAATGGAAGAGATGATATTAGGATTTAAGAAAAAATTGACATCC GCAGGTGTTGAAGCAGAGCACTGGGAGGTTGATCGAATTGTGGAGTACTTGACTACAGAGGAAGAGAATTTCAGCCTGAA TTTCATTTCCTATGGACGAAAAATAGCGGATGATCTCGAGCAGGACGGAAGACTAGGTACGGCAAAGAACTATCGGATAG CCATAAATGCGCTTGTCAGGTTCATCGGAAAAGAAGAGCTCGACATAAACCTCATTACAGCATCTTTTATGAGAGCGTTT GAGAAGTTCCTAAAAAATGAACCTTCTTTTAAAGGATGCCGCGATGGTGGATCAAAACCAACTGATAAGCCTAAAGGCAA ACGGGTCATATCCCTTTACACATCACAAATCAAAACATTACACAACCTCGCTAAAAATGAATATAACGACGAGGATAGAG GAATCATACGCATCCCATTTTCCCCGTTCTCAAAATACAAAATCGCACCAGTTCCCCAAAGTGAGCATCGAACATTGTCT ATAGACCAAGTACAGCAAATAATAGATCTTCCGTATAAACAAAATGCTCGCAATGGAGGTCAGCCTGTTTTCAATTTAGC GAAAGACATTTTTATCCTATCATTTGCGATGATGGGCATGAATAGTGCCGATTTCTATAATGCTCCTACCGTCGAAAACG GAATTATTTCCTATCAAAGGACTAAGACACGTACTAGGCGTGAAGATAAGGCAGAAATGAAAGTCCGGATTGAACCGGAA ATAAAAAAACTGTTTGAGAAATACTCCGACCCATCTGGAGAGAAAGTCTTTATTTTTCATAAGCGGTATAGAAGTTCAGA GAATTTCAATAAATCAATAAATAAAGGACTAGATGAGATAGGAGAAATAATAGGAGTTCCGGATCTGAATTATTATTATG CCCGGCATACAATGGCAACGTTAGCCGCTAATAAAGCGGGCATTGATATTGCAAGGGTAGATGAGATGCTTAACCATACC GATTCCACATTGAAGTTGGCTCGTGTGTATATCGAACGGGATTACAGTGTACTTTGGGAGGCCAACAGGAAGTTGTTATC CTTATTCAAATGGGATAGTCTAAAATAA
Upstream 100 bases:
>100_bases TATCCTACTAATTAAATAATCCAAACACGTACATATAAAATATCTTTTTGACGTACTTTTGTGTACTATTTTTTTTACAA ATGTTTTACAGTGCACGATT
Downstream 100 bases:
>100_bases ATTAGGTCGACCTGTTAGAGTTGTCCGAAAAAGCCAAACGGATCTTCGCTTGGAAATTTTTTGCAGGAGAATCTTTTGCC GATTGGCCGGGGCAGGAAAG
Product: transposase
Products: NA
Alternate protein names: Integrase; Tyrosine Type Site-Specific Recombinase; Tyrosine Site-Specific Recombinase; Site-Specific Recombinase Phage Integrase Family; Bacteriophage Integrase; Integrase/Transposase
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MATFKFLVLPHQRKEDGTYNVKIRITQKGKSKYIKTSHNVSVSDIIKKKDNGKEKIKIKNQAVIDLMEEMILGFKKKLTS AGVEAEHWEVDRIVEYLTTEEENFSLNFISYGRKIADDLEQDGRLGTAKNYRIAINALVRFIGKEELDINLITASFMRAF EKFLKNEPSFKGCRDGGSKPTDKPKGKRVISLYTSQIKTLHNLAKNEYNDEDRGIIRIPFSPFSKYKIAPVPQSEHRTLS IDQVQQIIDLPYKQNARNGGQPVFNLAKDIFILSFAMMGMNSADFYNAPTVENGIISYQRTKTRTRREDKAEMKVRIEPE IKKLFEKYSDPSGEKVFIFHKRYRSSENFNKSINKGLDEIGEIIGVPDLNYYYARHTMATLAANKAGIDIARVDEMLNHT DSTLKLARVYIERDYSVLWEANRKLLSLFKWDSLK
Sequences:
>Translated_435_residues MATFKFLVLPHQRKEDGTYNVKIRITQKGKSKYIKTSHNVSVSDIIKKKDNGKEKIKIKNQAVIDLMEEMILGFKKKLTS AGVEAEHWEVDRIVEYLTTEEENFSLNFISYGRKIADDLEQDGRLGTAKNYRIAINALVRFIGKEELDINLITASFMRAF EKFLKNEPSFKGCRDGGSKPTDKPKGKRVISLYTSQIKTLHNLAKNEYNDEDRGIIRIPFSPFSKYKIAPVPQSEHRTLS IDQVQQIIDLPYKQNARNGGQPVFNLAKDIFILSFAMMGMNSADFYNAPTVENGIISYQRTKTRTRREDKAEMKVRIEPE IKKLFEKYSDPSGEKVFIFHKRYRSSENFNKSINKGLDEIGEIIGVPDLNYYYARHTMATLAANKAGIDIARVDEMLNHT DSTLKLARVYIERDYSVLWEANRKLLSLFKWDSLK >Mature_434_residues ATFKFLVLPHQRKEDGTYNVKIRITQKGKSKYIKTSHNVSVSDIIKKKDNGKEKIKIKNQAVIDLMEEMILGFKKKLTSA GVEAEHWEVDRIVEYLTTEEENFSLNFISYGRKIADDLEQDGRLGTAKNYRIAINALVRFIGKEELDINLITASFMRAFE KFLKNEPSFKGCRDGGSKPTDKPKGKRVISLYTSQIKTLHNLAKNEYNDEDRGIIRIPFSPFSKYKIAPVPQSEHRTLSI DQVQQIIDLPYKQNARNGGQPVFNLAKDIFILSFAMMGMNSADFYNAPTVENGIISYQRTKTRTRREDKAEMKVRIEPEI KKLFEKYSDPSGEKVFIFHKRYRSSENFNKSINKGLDEIGEIIGVPDLNYYYARHTMATLAANKAGIDIARVDEMLNHTD STLKLARVYIERDYSVLWEANRKLLSLFKWDSLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50170; Mature: 50039
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATFKFLVLPHQRKEDGTYNVKIRITQKGKSKYIKTSHNVSVSDIIKKKDNGKEKIKIKN CCCEEEEEECCCCCCCCEEEEEEEEEECCCCCCEECCCCCCHHHHHHHCCCCCCEEEECH QAVIDLMEEMILGFKKKLTSAGVEAEHWEVDRIVEYLTTEEENFSLNFISYGRKIADDLE HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHCHHHHHHHH QDGRLGTAKNYRIAINALVRFIGKEELDINLITASFMRAFEKFLKNEPSFKGCRDGGSKP HCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCC TDKPKGKRVISLYTSQIKTLHNLAKNEYNDEDRGIIRIPFSPFSKYKIAPVPQSEHRTLS CCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEECCCCCCCCCEEC IDQVQQIIDLPYKQNARNGGQPVFNLAKDIFILSFAMMGMNSADFYNAPTVENGIISYQR HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHH TKTRTRREDKAEMKVRIEPEIKKLFEKYSDPSGEKVFIFHKRYRSSENFNKSINKGLDEI HHHHHHCCCCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCHHHHHHHHHHHH GEIIGVPDLNYYYARHTMATLAANKAGIDIARVDEMLNHTDSTLKLARVYIERDYSVLWE HHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHH ANRKLLSLFKWDSLK HHHHHHHHHHCCCCC >Mature Secondary Structure ATFKFLVLPHQRKEDGTYNVKIRITQKGKSKYIKTSHNVSVSDIIKKKDNGKEKIKIKN CCEEEEEECCCCCCCCEEEEEEEEEECCCCCCEECCCCCCHHHHHHHCCCCCCEEEECH QAVIDLMEEMILGFKKKLTSAGVEAEHWEVDRIVEYLTTEEENFSLNFISYGRKIADDLE HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEHHHHCHHHHHHHH QDGRLGTAKNYRIAINALVRFIGKEELDINLITASFMRAFEKFLKNEPSFKGCRDGGSKP HCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCC TDKPKGKRVISLYTSQIKTLHNLAKNEYNDEDRGIIRIPFSPFSKYKIAPVPQSEHRTLS CCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEECCCCCCCCCEEC IDQVQQIIDLPYKQNARNGGQPVFNLAKDIFILSFAMMGMNSADFYNAPTVENGIISYQR HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHH TKTRTRREDKAEMKVRIEPEIKKLFEKYSDPSGEKVFIFHKRYRSSENFNKSINKGLDEI HHHHHHCCCCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCHHHHHHHHHHHH GEIIGVPDLNYYYARHTMATLAANKAGIDIARVDEMLNHTDSTLKLARVYIERDYSVLWE HHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHH ANRKLLSLFKWDSLK HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA