Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is 150007206

Identifier: 150007206

GI number: 150007206

Start: 650831

End: 651277

Strand: Reverse

Name: 150007206

Synonym: BDI_0551

Alternate gene names: NA

Gene position: 651277-650831 (Counterclockwise)

Preceding gene: 150007207

Following gene: 150007200

Centisome position: 13.54

GC content: 54.36

Gene sequence:

>447_bases
ATGGGTAAGGTTTATTGTTTCTACCAGAATTACAGGGAGGTCAGCCTCCTTGTAATTCATTGCTCGGCCACACGATATGA
CAGGGATTTTCCTGTGGAGGCGCTCCGTTCATCGCACAAGGCACGGGGATTCGCCGATATCGGCTATCATTTCTATATCA
CACGGGACGGGGAGCTACATCGTTGCCGACCGGTCAACCAGATCGGGGCGCACGCAGCCGGATGGAACGACAAAAGTATC
GGTATATGTTACGAGGGAGGACTCGACGAACAAGGCCGTCCGGCCGATACCCGGACCTACGCCCAGCGCTGTACCTTGAT
GGATCTGCTACGGCAATTACGAAGGGATTACCCGGAGGCACGCATCCTAGGACATTACCAACTTAGCCCCTATATCCGTA
AGGCTTGCCCCTGCTTTGACGCAAGGGAGGAATACGGGGAGATCTAG

Upstream 100 bases:

>100_bases
ATGGAGTACTATTATCAAAGTGATCATCGCCGTAGCTACCGCCATCGCGGGAGCACTTGGCATCCAATCCTGTATTCTCT
AATTTTCAATTTCAATTATC

Downstream 100 bases:

>100_bases
CATTAGAATTTCTTACCGAACGCTATATTCAAGAAGGTCTTCACCAATATCTTGAAATCGAACAGCCAAGAGCGATGTTC
CAGATAGAACAGGTCGTAAC

Product: putative N-acetylmuramoyl-L-alanine amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MGKVYCFYQNYREVSLLVIHCSATRYDRDFPVEALRSSHKARGFADIGYHFYITRDGELHRCRPVNQIGAHAAGWNDKSI
GICYEGGLDEQGRPADTRTYAQRCTLMDLLRQLRRDYPEARILGHYQLSPYIRKACPCFDAREEYGEI

Sequences:

>Translated_148_residues
MGKVYCFYQNYREVSLLVIHCSATRYDRDFPVEALRSSHKARGFADIGYHFYITRDGELHRCRPVNQIGAHAAGWNDKSI
GICYEGGLDEQGRPADTRTYAQRCTLMDLLRQLRRDYPEARILGHYQLSPYIRKACPCFDAREEYGEI
>Mature_147_residues
GKVYCFYQNYREVSLLVIHCSATRYDRDFPVEALRSSHKARGFADIGYHFYITRDGELHRCRPVNQIGAHAAGWNDKSIG
ICYEGGLDEQGRPADTRTYAQRCTLMDLLRQLRRDYPEARILGHYQLSPYIRKACPCFDAREEYGEI

Specific function: Unknown

COG id: COG3023

COG function: function code V; Negative regulator of beta-lactamase expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To phage T3 and T7 N-acetylmuramoyl-L-alanine amidases [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002502
- InterPro:   IPR018247
- InterPro:   IPR015510 [H]

Pfam domain/function: PF01510 Amidase_2 [H]

EC number: NA

Molecular weight: Translated: 17205; Mature: 17073

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKVYCFYQNYREVSLLVIHCSATRYDRDFPVEALRSSHKARGFADIGYHFYITRDGELH
CCCEEEEECCCCEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEECCEEEEEECCCCCC
RCRPVNQIGAHAAGWNDKSIGICYEGGLDEQGRPADTRTYAQRCTLMDLLRQLRRDYPEA
CCCCCHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
RILGHYQLSPYIRKACPCFDAREEYGEI
EEEEEEECCHHHHHHCCCCCCHHHHCCC
>Mature Secondary Structure 
GKVYCFYQNYREVSLLVIHCSATRYDRDFPVEALRSSHKARGFADIGYHFYITRDGELH
CCEEEEECCCCEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEECCEEEEEECCCCCC
RCRPVNQIGAHAAGWNDKSIGICYEGGLDEQGRPADTRTYAQRCTLMDLLRQLRRDYPEA
CCCCCHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
RILGHYQLSPYIRKACPCFDAREEYGEI
EEEEEEECCHHHHHHCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]