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The map label for this gene is rbsR [C]

Identifier: 150007035

GI number: 150007035

Start: 431927

End: 432988

Strand: Reverse

Name: rbsR [C]

Synonym: BDI_0378

Alternate gene names: 150007035

Gene position: 432988-431927 (Counterclockwise)

Preceding gene: 150007036

Following gene: 150007034

Centisome position: 9.0

GC content: 42.47

Gene sequence:

>1062_bases
ATGAATAAAAATTACAGGATAAAAGATATCGCCGAATTATCCGGCGTATCGACCGGTACGGTAGACCGCATTTTACATGA
GCGGGGAAAGGTATCGGAGGACGCACGGAAAAAGGTGGAGAAAATCTTAAAAGAAATTGACTATCAACCAAATCTGATAG
CCCGTTCTTTAGCGTTGAAGAAAAAATATCATTTCATCGCCTTGATCCCTTCTTTCCATGAAGGGGAATACTGGGCGAAA
CTAAGCCAAGGGATCGAGAAAGCAAAACGGGAATTGTTTAGCTATAATATCGATGTCGAGCAAATCTATTTTGACCAATA
CGACAGCAACAGTTTCGACGAATTAATCCCGAAGATTGAGACCGCGGATTGCCAAGGGGTTATCATCGCTACATTATTCA
AGCAAAGTGTCTTGACCTTGACCCAGCGGCTAGACCAGAAAGGTATTCCTTATATATTGATCGATTCTTTTATCGATCAC
ACGAATTGTATCTCTTATTACGGAACGCATTCATATGATTCGGGTTATATAGCGGGACGCCTTTTATTCGAGCAAATCCG
TCAAGGGGACGATCTAGTGATTTTCCGTTTCACCCGTAAAGGGGATTCATGTTCTACGCAAGTGCAGAAACGAGAGGAAG
GATTCCGGGATTATCTCGCCAACACCCCATTCAAGGGAAAGATTCATTTGCTGCATGTGCACGCGGATGATAAGGAGGAG
AATAAGAGGCTACTGAATACTTTCTTCGAGAAATATCCTCAAGTAAGAATCGGTATCATCTTTAATTCGAGGGCCCATTT
CCTTGGAGATTATCTAAGTAGCGAACGGCCGGACTATCCTTTCAAGCTTCTTGGCTACGACGTGATAGAACCGAACGTCC
GTTATCTGGAAAACGGCTTGATCACGCATTTGATCGCCCAACGACCGGAGGTACAAGGATATCATTGTATCAAGGCACTC
TTCAGGCATCTGATCCTTAAGGAGAAAATTGAGCCTGTCAATTATATGCCGATCGATATCTTGGTAAAGGAAAATATACA
ATACTACAATAATTATATCTGA

Upstream 100 bases:

>100_bases
CTTATCTATATGATGTATGGCTACGTTTTCCGTAAATTGAACACACCTCTTCAAATACTCGAATAAACAGAGAGGACGAA
TACACACTACAATCTATACC

Downstream 100 bases:

>100_bases
TGAACTCCTTATTTAGCGTAAAAGAGAAAGTGATTTTGTTGACCGGAGGCTATGGTATATTAGGAGCCTGCATGGCCAAG
CACTTGGCGAGAGAAGGCGC

Product: transcriptional regulator catabolite control protein A

Products: NA

Alternate protein names: Transcriptional Regulator; LacI Family Transcription Regulator; Regulatory Protein LacI; LacI Family Transcriptional Regulator; Transcriptional Regulator Laci Family; Transcriptional Regulatory Protein; Catabolite Control Protein A; HTH-Type Transcriptional Repressor RBAM; Alanine Racemase; Ribose Operon Repressor; Sugar ABC Transporter Periplasmic Protein; Degradation Activator; LacI Family Regulatory; Catabolite Control Protein; HTH-Type Transcriptional Regulator DegA; LacI-Family Transcriptional Regulator; Catabolite Control Protein B; LacI Regulatory Protein

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MNKNYRIKDIAELSGVSTGTVDRILHERGKVSEDARKKVEKILKEIDYQPNLIARSLALKKKYHFIALIPSFHEGEYWAK
LSQGIEKAKRELFSYNIDVEQIYFDQYDSNSFDELIPKIETADCQGVIIATLFKQSVLTLTQRLDQKGIPYILIDSFIDH
TNCISYYGTHSYDSGYIAGRLLFEQIRQGDDLVIFRFTRKGDSCSTQVQKREEGFRDYLANTPFKGKIHLLHVHADDKEE
NKRLLNTFFEKYPQVRIGIIFNSRAHFLGDYLSSERPDYPFKLLGYDVIEPNVRYLENGLITHLIAQRPEVQGYHCIKAL
FRHLILKEKIEPVNYMPIDILVKENIQYYNNYI

Sequences:

>Translated_353_residues
MNKNYRIKDIAELSGVSTGTVDRILHERGKVSEDARKKVEKILKEIDYQPNLIARSLALKKKYHFIALIPSFHEGEYWAK
LSQGIEKAKRELFSYNIDVEQIYFDQYDSNSFDELIPKIETADCQGVIIATLFKQSVLTLTQRLDQKGIPYILIDSFIDH
TNCISYYGTHSYDSGYIAGRLLFEQIRQGDDLVIFRFTRKGDSCSTQVQKREEGFRDYLANTPFKGKIHLLHVHADDKEE
NKRLLNTFFEKYPQVRIGIIFNSRAHFLGDYLSSERPDYPFKLLGYDVIEPNVRYLENGLITHLIAQRPEVQGYHCIKAL
FRHLILKEKIEPVNYMPIDILVKENIQYYNNYI
>Mature_353_residues
MNKNYRIKDIAELSGVSTGTVDRILHERGKVSEDARKKVEKILKEIDYQPNLIARSLALKKKYHFIALIPSFHEGEYWAK
LSQGIEKAKRELFSYNIDVEQIYFDQYDSNSFDELIPKIETADCQGVIIATLFKQSVLTLTQRLDQKGIPYILIDSFIDH
TNCISYYGTHSYDSGYIAGRLLFEQIRQGDDLVIFRFTRKGDSCSTQVQKREEGFRDYLANTPFKGKIHLLHVHADDKEE
NKRLLNTFFEKYPQVRIGIIFNSRAHFLGDYLSSERPDYPFKLLGYDVIEPNVRYLENGLITHLIAQRPEVQGYHCIKAL
FRHLILKEKIEPVNYMPIDILVKENIQYYNNYI

Specific function: Transcriptional Repressor For The Ribose Rbsdacbk Operon. Rbsr Binds To A Region Of Perfect Dyad Symmetry Spanning The Rbs Operon Transcriptional Start Site. The Affinity For The Rbs Operator Is Reduced By Addition Of Ribose, Consistent With Ribose Being

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41296; Mature: 41296

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKNYRIKDIAELSGVSTGTVDRILHERGKVSEDARKKVEKILKEIDYQPNLIARSLALK
CCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
KKYHFIALIPSFHEGEYWAKLSQGIEKAKRELFSYNIDVEQIYFDQYDSNSFDELIPKIE
HCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCHHHHCCCCC
TADCQGVIIATLFKQSVLTLTQRLDQKGIPYILIDSFIDHTNCISYYGTHSYDSGYIAGR
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHCCCHHHHHCCCCCCCCCHHHHH
LLFEQIRQGDDLVIFRFTRKGDSCSTQVQKREEGFRDYLANTPFKGKIHLLHVHADDKEE
HHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHH
NKRLLNTFFEKYPQVRIGIIFNSRAHFLGDYLSSERPDYPFKLLGYDVIEPNVRYLENGL
HHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHH
ITHLIAQRPEVQGYHCIKALFRHLILKEKIEPVNYMPIDILVKENIQYYNNYI
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHCCC
>Mature Secondary Structure
MNKNYRIKDIAELSGVSTGTVDRILHERGKVSEDARKKVEKILKEIDYQPNLIARSLALK
CCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
KKYHFIALIPSFHEGEYWAKLSQGIEKAKRELFSYNIDVEQIYFDQYDSNSFDELIPKIE
HCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCHHHHCCCCC
TADCQGVIIATLFKQSVLTLTQRLDQKGIPYILIDSFIDHTNCISYYGTHSYDSGYIAGR
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHCCCHHHHHCCCCCCCCCHHHHH
LLFEQIRQGDDLVIFRFTRKGDSCSTQVQKREEGFRDYLANTPFKGKIHLLHVHADDKEE
HHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHH
NKRLLNTFFEKYPQVRIGIIFNSRAHFLGDYLSSERPDYPFKLLGYDVIEPNVRYLENGL
HHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHH
ITHLIAQRPEVQGYHCIKALFRHLILKEKIEPVNYMPIDILVKENIQYYNNYI
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA