| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is dcp [H]
Identifier: 150006873
GI number: 150006873
Start: 212688
End: 214787
Strand: Reverse
Name: dcp [H]
Synonym: BDI_0207
Alternate gene names: 150006873
Gene position: 214787-212688 (Counterclockwise)
Preceding gene: 150006877
Following gene: 150006872
Centisome position: 4.46
GC content: 43.9
Gene sequence:
>2100_bases ATGAGGAAGTTATTATATAATGTAGTAATTTTATTAAGCGCAATTCAAATGACACACGCAGCAAATAACCCTTTCTTCGG GAAGTTTAAAACACCGTTCGAGACCCCTCCTTTCGATAAGATCAAGATCGAGCATTATGAGCCCGCTTTCGACGAAGGAA TCAAGCAAATGGAAAAAGAGGTGCAAGAGATCGCCAATAACCCGCAACCGGCTACTTTCGAGAATACGGTAGTAGCTCTG GAACGTAGCGGCAAATTATTAGAAACAGTCTCTTCTGTTTTTTTTAATGTATTAGGGGCAGAGGCTAACGACGAAATGAT GGAAATCTCGCAACGTGTCTCCCCGAAGTTATCCCAGACATCCAATAACATCTTCTTAAATGAGAAGCTACTTGCTCGGG TCAAATCAATCTATGATAAAAAAGAACAATTGAACCTTTCTACCGAGGATGCTAAATTGCTGGAAGACCTTTACGAGTCG TTTAAAGCGAATGGGGCTACGTTAAATAAAGATGACAAGGAAAAATACCGCAAGCTAAGTATGGACCTAAGCATGTTAAC CTTGCAGTTCGATCAAAACGCCTTGAAAGATAAAAACCGATTCGAATTACTAATAACGGACGAGAACGAACTATCCGGCT TACCCGAAAGTGCTCGTGACGCAGCGGCCATGTTAGCCAAAAGTAAAGATAAAAATGGATGGTTATTCAATCTCTCGGCT CCGAGTTACATTCCATTTATGCGTTATTCCGACAAGCGTGATTTGCGAGAAAAAATGTATCGTGAATACATGAGCGTAGG AAATAAAGGGGATGAGTTCGACAATAAGGACATTATCAAAAAGATCGTTAATATCCGCCTAGAGATCGCCCAGTTGATGG GATTCAAGAATTACGCCGAATATGCGCTGGAACACACGATGGCTAAAAACTCAGCGAACGTATACAAATTATTGAATCAG TTACTCGAAGCTTATAAACCGATAGCGATCAACGAATACAATGCAGTAGAAGGATTCGCATTAGGTACAGAGAAAGAGAA TATCACCGTTATGCCTTGGGACTGGAGTTATTATTCCGAGAAGTTACGGGATATCCGCTTCAAGGTAAACGACGAGATGA CTCGCCCTTATTTCGAGTTAAGCAACGTAAAGAAAGGCGTATTCGGATTAGCTACCCAGCTCTACGGTATCACCTTTAAG GAAAACAAGAAAATCCCGGTTTATCATCCGGAAGTAGACGCTTATGAGGTATACGATGCCGATGGTAAGTTCCTTGCTAT CCTTTATACGGATTTCTTCCCTCGTGACGGAAAACAATCCGGCGCTTGGATGAACAATATCAAGGCTCAATACAAAGATA AAGACGGAAAAGATAGCCGTCCTCAGATCGTTATCGTGATGAACTTTACCCGTCCGACAGACACGAAGCCCTCTTTGTTA AGTTTCGACGAGGTGAACACGCTCTTGCATGAGTTCGGGCACTCCTTGCACGGCATGCTAGCGCAAGGAACCTATTCCAG CCTTTCGGGAACCAGCGTTTATCGTGATTTCGTAGAATTACCTTCCCAGATCATGGAGAACTGGTTGACTGAAAAAGAGT TCTTAGATCAGATCGCCGTTCATTACCAGACCGGAGAGAAAATCCCGCAAGAGATGATACAAAGCTTGGTAAACGCCTCT AACTTCAACGCCGGCTACCTTTGCTGCCGCCAATTAAGCTTTGGCTTGCTGGATATGGCATGGCATACGTTGGAGCAACC TTTCGACGGTGACGTAGCGACATTCGAGAAAAAAGCTTGGGCTCCGACGGTAATCGTACCGGAAGTACCGGAAGCCTTGA TGGGCACAAGCTTCGGACATATCTTCTCCGGAGGATACGCGGCAGGCTATTACGGATATAAATGGGCCGAGGTATTAGAC GCCGACGCTTTCTCCGTTTTCAAATCGAAAGGAATCTTCAACAAGGAGGTCGCGAAATCTTTCCGTGACAATATCTTATC CAAAGGTGGTACAGAAGATCCCGCCGTGTTATACAAGCGTTTCCGTGGACAAGAGCCTACGATAGACGCCTTATTAATCC GTAATGGTATTAAGAAGTAA
Upstream 100 bases:
>100_bases ATTTTTCATTTTAAATCAATCTGAATATAAAAACAGATGCCTATAATGTTCCTGTGATTAAAATGCCTACCTTTGCGGAA ATTTTCAAACAATTTTTAAT
Downstream 100 bases:
>100_bases TAATTTACCGGGCTTATCGCCCGGTAAATCTAAATAATCACTACCTTTGTGTCTGGATTAAAAGACAAAAGAGTAAACAA ATGTGCGAGAAAACAGAAAA
Product: peptidyl-dipeptidase
Products: NA
Alternate protein names: Dipeptidyl carboxypeptidase [H]
Number of amino acids: Translated: 699; Mature: 699
Protein sequence:
>699_residues MRKLLYNVVILLSAIQMTHAANNPFFGKFKTPFETPPFDKIKIEHYEPAFDEGIKQMEKEVQEIANNPQPATFENTVVAL ERSGKLLETVSSVFFNVLGAEANDEMMEISQRVSPKLSQTSNNIFLNEKLLARVKSIYDKKEQLNLSTEDAKLLEDLYES FKANGATLNKDDKEKYRKLSMDLSMLTLQFDQNALKDKNRFELLITDENELSGLPESARDAAAMLAKSKDKNGWLFNLSA PSYIPFMRYSDKRDLREKMYREYMSVGNKGDEFDNKDIIKKIVNIRLEIAQLMGFKNYAEYALEHTMAKNSANVYKLLNQ LLEAYKPIAINEYNAVEGFALGTEKENITVMPWDWSYYSEKLRDIRFKVNDEMTRPYFELSNVKKGVFGLATQLYGITFK ENKKIPVYHPEVDAYEVYDADGKFLAILYTDFFPRDGKQSGAWMNNIKAQYKDKDGKDSRPQIVIVMNFTRPTDTKPSLL SFDEVNTLLHEFGHSLHGMLAQGTYSSLSGTSVYRDFVELPSQIMENWLTEKEFLDQIAVHYQTGEKIPQEMIQSLVNAS NFNAGYLCCRQLSFGLLDMAWHTLEQPFDGDVATFEKKAWAPTVIVPEVPEALMGTSFGHIFSGGYAAGYYGYKWAEVLD ADAFSVFKSKGIFNKEVAKSFRDNILSKGGTEDPAVLYKRFRGQEPTIDALLIRNGIKK
Sequences:
>Translated_699_residues MRKLLYNVVILLSAIQMTHAANNPFFGKFKTPFETPPFDKIKIEHYEPAFDEGIKQMEKEVQEIANNPQPATFENTVVAL ERSGKLLETVSSVFFNVLGAEANDEMMEISQRVSPKLSQTSNNIFLNEKLLARVKSIYDKKEQLNLSTEDAKLLEDLYES FKANGATLNKDDKEKYRKLSMDLSMLTLQFDQNALKDKNRFELLITDENELSGLPESARDAAAMLAKSKDKNGWLFNLSA PSYIPFMRYSDKRDLREKMYREYMSVGNKGDEFDNKDIIKKIVNIRLEIAQLMGFKNYAEYALEHTMAKNSANVYKLLNQ LLEAYKPIAINEYNAVEGFALGTEKENITVMPWDWSYYSEKLRDIRFKVNDEMTRPYFELSNVKKGVFGLATQLYGITFK ENKKIPVYHPEVDAYEVYDADGKFLAILYTDFFPRDGKQSGAWMNNIKAQYKDKDGKDSRPQIVIVMNFTRPTDTKPSLL SFDEVNTLLHEFGHSLHGMLAQGTYSSLSGTSVYRDFVELPSQIMENWLTEKEFLDQIAVHYQTGEKIPQEMIQSLVNAS NFNAGYLCCRQLSFGLLDMAWHTLEQPFDGDVATFEKKAWAPTVIVPEVPEALMGTSFGHIFSGGYAAGYYGYKWAEVLD ADAFSVFKSKGIFNKEVAKSFRDNILSKGGTEDPAVLYKRFRGQEPTIDALLIRNGIKK >Mature_699_residues MRKLLYNVVILLSAIQMTHAANNPFFGKFKTPFETPPFDKIKIEHYEPAFDEGIKQMEKEVQEIANNPQPATFENTVVAL ERSGKLLETVSSVFFNVLGAEANDEMMEISQRVSPKLSQTSNNIFLNEKLLARVKSIYDKKEQLNLSTEDAKLLEDLYES FKANGATLNKDDKEKYRKLSMDLSMLTLQFDQNALKDKNRFELLITDENELSGLPESARDAAAMLAKSKDKNGWLFNLSA PSYIPFMRYSDKRDLREKMYREYMSVGNKGDEFDNKDIIKKIVNIRLEIAQLMGFKNYAEYALEHTMAKNSANVYKLLNQ LLEAYKPIAINEYNAVEGFALGTEKENITVMPWDWSYYSEKLRDIRFKVNDEMTRPYFELSNVKKGVFGLATQLYGITFK ENKKIPVYHPEVDAYEVYDADGKFLAILYTDFFPRDGKQSGAWMNNIKAQYKDKDGKDSRPQIVIVMNFTRPTDTKPSLL SFDEVNTLLHEFGHSLHGMLAQGTYSSLSGTSVYRDFVELPSQIMENWLTEKEFLDQIAVHYQTGEKIPQEMIQSLVNAS NFNAGYLCCRQLSFGLLDMAWHTLEQPFDGDVATFEKKAWAPTVIVPEVPEALMGTSFGHIFSGGYAAGYYGYKWAEVLD ADAFSVFKSKGIFNKEVAKSFRDNILSKGGTEDPAVLYKRFRGQEPTIDALLIRNGIKK
Specific function: Removes dipeptides from the C-termini of N-blocked tripeptides, tetrapeptides and larger peptides [H]
COG id: COG0339
COG function: function code E; Zn-dependent oligopeptidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M3 family [H]
Homologues:
Organism=Homo sapiens, GI4507491, Length=638, Percent_Identity=30.7210031347962, Blast_Score=323, Evalue=4e-88, Organism=Homo sapiens, GI14149738, Length=607, Percent_Identity=28.665568369028, Blast_Score=246, Evalue=5e-65, Organism=Homo sapiens, GI156105687, Length=673, Percent_Identity=24.665676077266, Blast_Score=192, Evalue=1e-48, Organism=Escherichia coli, GI1787819, Length=679, Percent_Identity=39.0279823269514, Blast_Score=479, Evalue=1e-136, Organism=Escherichia coli, GI1789913, Length=681, Percent_Identity=38.3259911894273, Blast_Score=466, Evalue=1e-132, Organism=Caenorhabditis elegans, GI32565901, Length=609, Percent_Identity=21.6748768472906, Blast_Score=104, Evalue=2e-22, Organism=Caenorhabditis elegans, GI71999758, Length=577, Percent_Identity=22.5303292894281, Blast_Score=102, Evalue=9e-22, Organism=Saccharomyces cerevisiae, GI6319793, Length=658, Percent_Identity=28.7234042553192, Blast_Score=246, Evalue=6e-66, Organism=Saccharomyces cerevisiae, GI6322715, Length=701, Percent_Identity=23.5378031383738, Blast_Score=150, Evalue=1e-36, Organism=Drosophila melanogaster, GI21356111, Length=546, Percent_Identity=26.1904761904762, Blast_Score=188, Evalue=1e-47, Organism=Drosophila melanogaster, GI20129717, Length=413, Percent_Identity=26.3922518159806, Blast_Score=154, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001567 [H]
Pfam domain/function: PF01432 Peptidase_M3 [H]
EC number: =3.4.15.5 [H]
Molecular weight: Translated: 79870; Mature: 79870
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLLYNVVILLSAIQMTHAANNPFFGKFKTPFETPPFDKIKIEHYEPAFDEGIKQMEKE CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH VQEIANNPQPATFENTVVALERSGKLLETVSSVFFNVLGAEANDEMMEISQRVSPKLSQT HHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHC SNNIFLNEKLLARVKSIYDKKEQLNLSTEDAKLLEDLYESFKANGATLNKDDKEKYRKLS CCCEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH MDLSMLTLQFDQNALKDKNRFELLITDENELSGLPESARDAAAMLAKSKDKNGWLFNLSA CCHHHEEEECCCHHHCCCCCEEEEEECCHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECC PSYIPFMRYSDKRDLREKMYREYMSVGNKGDEFDNKDIIKKIVNIRLEIAQLMGFKNYAE CCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHH YALEHTMAKNSANVYKLLNQLLEAYKPIAINEYNAVEGFALGTEKENITVMPWDWSYYSE HHHHHHHHCCCHHHHHHHHHHHHHHCCCEECCCCCCCCEEECCCCCCEEEEECCHHHHHH KLRDIRFKVNDEMTRPYFELSNVKKGVFGLATQLYGITFKENKKIPVYHPEVDAYEVYDA HHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEECCCCCCEEEECC DGKFLAILYTDFFPRDGKQSGAWMNNIKAQYKDKDGKDSRPQIVIVMNFTRPTDTKPSLL CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCC SFDEVNTLLHEFGHSLHGMLAQGTYSSLSGTSVYRDFVELPSQIMENWLTEKEFLDQIAV CHHHHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HYQTGEKIPQEMIQSLVNASNFNAGYLCCRQLSFGLLDMAWHTLEQPFDGDVATFEKKAW HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC APTVIVPEVPEALMGTSFGHIFSGGYAAGYYGYKWAEVLDADAFSVFKSKGIFNKEVAKS CCEEECCCCCHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH FRDNILSKGGTEDPAVLYKRFRGQEPTIDALLIRNGIKK HHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCC >Mature Secondary Structure MRKLLYNVVILLSAIQMTHAANNPFFGKFKTPFETPPFDKIKIEHYEPAFDEGIKQMEKE CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH VQEIANNPQPATFENTVVALERSGKLLETVSSVFFNVLGAEANDEMMEISQRVSPKLSQT HHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHC SNNIFLNEKLLARVKSIYDKKEQLNLSTEDAKLLEDLYESFKANGATLNKDDKEKYRKLS CCCEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH MDLSMLTLQFDQNALKDKNRFELLITDENELSGLPESARDAAAMLAKSKDKNGWLFNLSA CCHHHEEEECCCHHHCCCCCEEEEEECCHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECC PSYIPFMRYSDKRDLREKMYREYMSVGNKGDEFDNKDIIKKIVNIRLEIAQLMGFKNYAE CCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHH YALEHTMAKNSANVYKLLNQLLEAYKPIAINEYNAVEGFALGTEKENITVMPWDWSYYSE HHHHHHHHCCCHHHHHHHHHHHHHHCCCEECCCCCCCCEEECCCCCCEEEEECCHHHHHH KLRDIRFKVNDEMTRPYFELSNVKKGVFGLATQLYGITFKENKKIPVYHPEVDAYEVYDA HHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEECCCCCCEEEECC DGKFLAILYTDFFPRDGKQSGAWMNNIKAQYKDKDGKDSRPQIVIVMNFTRPTDTKPSLL CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCC SFDEVNTLLHEFGHSLHGMLAQGTYSSLSGTSVYRDFVELPSQIMENWLTEKEFLDQIAV CHHHHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HYQTGEKIPQEMIQSLVNASNFNAGYLCCRQLSFGLLDMAWHTLEQPFDGDVATFEKKAW HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC APTVIVPEVPEALMGTSFGHIFSGGYAAGYYGYKWAEVLDADAFSVFKSKGIFNKEVAKS CCEEECCCCCHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH FRDNILSKGGTEDPAVLYKRFRGQEPTIDALLIRNGIKK HHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226676; 9097039; 9278503 [H]