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The map label for this gene is ygfA [C]

Identifier: 150006870

GI number: 150006870

Start: 209966

End: 210520

Strand: Reverse

Name: ygfA [C]

Synonym: BDI_0204

Alternate gene names: 150006870

Gene position: 210520-209966 (Counterclockwise)

Preceding gene: 150006871

Following gene: 150006867

Centisome position: 4.38

GC content: 48.65

Gene sequence:

>555_bases
ATGGAGACTTACACAGCCAAGCAGGCCCTACGAAAAGATATGGCCTCTCGAAAAAAAGAATATTCGAGGATTACCTTGTG
CGAGCTATCGGATAAGATCATGGACCGCTTGGAACAGACGGAACTGTTCCAAGCGGCTTCTTGCATCGCCCTTTATCACG
CCATACCGGGAGAAGTACAGACCGCCGGCTTTATCGAGAAATGGTACCAGAAGAAAAAGCTTCTGTTGCCCTTGATCGTC
GGTGATGATTTGAGATTGCTTCTTTACGAAGGACCGGAATCCCTAAAACCCGGACCTTTCGGAATATTAGAGCCTAAGGC
GGACGGCATAGAAGTTCCAAAGAATGAGATCGACTTGATTATCGTGCCCGGAGTCGCCTTTGATAAAGACAAGAACCGCA
TGGGACGAGGAAGGGGATTCTACGACCGCCTTCTTTCCACGCTCAACGCTCCCAAGGTTGGCATATGCTTCGGGTTCCAG
ATGATACCGCAAGTCCCGGTAGAGCCACTCGACAAGAAAATGGATTACGTAATAACAGAAGACACCATCTATTGA

Upstream 100 bases:

>100_bases
CCCATTTTCCTAAAAGATGACGTTACCTTATTACGTGCGATCAAGATCTTGCAAGAGGGAAAATCTGTGCCGAATGCGGA
ACTATTAAAACAATCAGCGA

Downstream 100 bases:

>100_bases
TCTCTCCGCAGAATATATACTTACTGGGTCAAGCCATATATACTTACCGAGGCTGGGCAGTATATGTTACTTGACCCTGT
AAGTAATATTGCGAATGGTA

Product: putative 5-formyltetrahydrofolate cyclo-ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
METYTAKQALRKDMASRKKEYSRITLCELSDKIMDRLEQTELFQAASCIALYHAIPGEVQTAGFIEKWYQKKKLLLPLIV
GDDLRLLLYEGPESLKPGPFGILEPKADGIEVPKNEIDLIIVPGVAFDKDKNRMGRGRGFYDRLLSTLNAPKVGICFGFQ
MIPQVPVEPLDKKMDYVITEDTIY

Sequences:

>Translated_184_residues
METYTAKQALRKDMASRKKEYSRITLCELSDKIMDRLEQTELFQAASCIALYHAIPGEVQTAGFIEKWYQKKKLLLPLIV
GDDLRLLLYEGPESLKPGPFGILEPKADGIEVPKNEIDLIIVPGVAFDKDKNRMGRGRGFYDRLLSTLNAPKVGICFGFQ
MIPQVPVEPLDKKMDYVITEDTIY
>Mature_184_residues
METYTAKQALRKDMASRKKEYSRITLCELSDKIMDRLEQTELFQAASCIALYHAIPGEVQTAGFIEKWYQKKKLLLPLIV
GDDLRLLLYEGPESLKPGPFGILEPKADGIEVPKNEIDLIIVPGVAFDKDKNRMGRGRGFYDRLLSTLNAPKVGICFGFQ
MIPQVPVEPLDKKMDYVITEDTIY

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Homo sapiens, GI5453746, Length=191, Percent_Identity=29.3193717277487, Blast_Score=69, Evalue=3e-12,
Organism=Escherichia coli, GI1789278, Length=147, Percent_Identity=32.6530612244898, Blast_Score=69, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17510857, Length=191, Percent_Identity=26.7015706806283, Blast_Score=69, Evalue=9e-13,
Organism=Drosophila melanogaster, GI161077430, Length=196, Percent_Identity=27.0408163265306, Blast_Score=70, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 20888; Mature: 20888

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METYTAKQALRKDMASRKKEYSRITLCELSDKIMDRLEQTELFQAASCIALYHAIPGEVQ
CCCHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
TAGFIEKWYQKKKLLLPLIVGDDLRLLLYEGPESLKPGPFGILEPKADGIEVPKNEIDLI
HHHHHHHHHHHHHEEEEEEECCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCEE
IVPGVAFDKDKNRMGRGRGFYDRLLSTLNAPKVGICFGFQMIPQVPVEPLDKKMDYVITE
EECCEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCHHCCCCCCCCCCCCCCEEEEC
DTIY
CCCC
>Mature Secondary Structure
METYTAKQALRKDMASRKKEYSRITLCELSDKIMDRLEQTELFQAASCIALYHAIPGEVQ
CCCHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
TAGFIEKWYQKKKLLLPLIVGDDLRLLLYEGPESLKPGPFGILEPKADGIEVPKNEIDLI
HHHHHHHHHHHHHEEEEEEECCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCEE
IVPGVAFDKDKNRMGRGRGFYDRLLSTLNAPKVGICFGFQMIPQVPVEPLDKKMDYVITE
EECCEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCHHCCCCCCCCCCCCCCEEEEC
DTIY
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]