Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is 150006834

Identifier: 150006834

GI number: 150006834

Start: 175952

End: 178363

Strand: Reverse

Name: 150006834

Synonym: BDI_0165

Alternate gene names: NA

Gene position: 178363-175952 (Counterclockwise)

Preceding gene: 150006839

Following gene: 150006833

Centisome position: 3.71

GC content: 46.6

Gene sequence:

>2412_bases
ATGAAGATTCGTGCGATAGCCGCGCTGCTATTTATACTTATTTCCGTGAGTGCCTTTGGCGAGGGCCGCATAAAAATCAC
TGGTTATGTCCGTGACGCCGACGGTAACCCCCTGGAATTAGTGAATGTCCGGGTTAAGAACACGTTGATCGGCTCCATGA
CCAACGAGAAGGGATATTATTCCTTTTCCATATCGCCGGGAGACTCTATCTCCATTATTTACTCCTGTCTGGGATATAAT
AAAGCCGAGCGTATCATTCCCTCGGCACAAGCCGACATGCGCCTGAACGTACAGATGAACAATACCTCATTTGATTTAGG
GGAAGTATCCGTTACTGCCATCCGCAAGCAGACCACGACCATGGAGTCCCTAAACGCAGACAAAATCAAGTTATTGCCCG
ATCCCTCCGGAGGTAGTATAGAGAGCTTGGTCGTTACGTTTGCCGGCGTATCGTCCAATAACGAGCTAAGTTCCCAGTAT
TCCGTACGTGGAGGTAGTTATGATGAAAATATCGTTTATGTGAATGGTATCGAGGTATTCCGTCCGCTTCTGATTCGCTC
GGGACAACAAGAGGGCCTTAGCTTTATCAATCCGGACCTAACGGAGGCGGTCAATTTCGCCGCCGGTGGCTTCGAGGCTC
GTTACGGAGACAAGATGAGTTCCGTGCTGGATATTACCTATAAAAAGCCTAAGATATTCGAAGGTTCGGCTTCCGCGAGC
TTGTTGGGCGCAAATGCTTATGTAGGCAGTTCTATCGGTAAATTTACCCAAGTAACGGGTTTCCGCTTTAAAAGCGGTCG
GTCTATTTTGGGTACCATGGATACAGACGCTGAATACGACCCTAAATTTATCGATCTGCAAACTTACATCACGTACCAAT
TGGCCCCTAAATGGGAAATCAATTTCTTGGGAAACCTCGCTAACAATAATTATAAATTCACCCCTTATAGTCGGGAAACC
TCTTTCGGTACAGCCGAGCATCCCAAGAACTTCAAAGTCTATTTCGACGGAAGGGAAAGAGACCGTTTCCAAACCTTATT
CGGTGCGCTTACATTGAAACACAATCCCAATGAGAACACAGAGTTGGGACTTCAAGCCTCCGCTTTCAAAAGCAAGGAAG
AAGAGGGATACGATATTGCCGGAGAATATTGGCTGAGCGAGAACGGAGCGGAAAATCCGGATGACGATGCGTCAGCCGCC
ATGTCCGTAGGCCGTTATCACGAGCACGCACGAAACCGTTTGAACTCCACCGTCATGAATGTCGGGCATTATGGGATGGC
CCGCCTTTTAAACAATACGTTGAAATGGGGAGCCACGGTACAAATGGAAAAAATCAATGATAAGATCAGTGAATGGGAAA
AAAGGGATTCCTCGGGTTATTCTTTGCCCCAAACGGGTAATAACGTAAGCGTATATTCGAACCTCTTTTCTGATAATCAG
ATAGAAAGCACACGCTTTTCCGCTTATGCGCAAGACGCGTTCAAATTCAGGACCAAGCAAGGTCTGTTCACGTTAGTCGC
AGGGGTTAGAGGTAGTTATTGGACTTATAATAAGGAGTTCCTTTTCAGTCCCCGTGCCTCATTGGGCTTTATCCCGAACT
TCGACCAAGACTTGACGCTCCGTTTCGCCACCGGACTGTATTATCAATCGCCCTTCTACAAGGAATTACGTAGAGTAGAC
AAAGATAAGAACGGCAATAATATCACGGTATTGAACAAAGATCTAAAGTCACAACGCTCCATCCATTTCATCTTGGGAGG
AGATTATACGTTCCGTGCCGTAGACCGGAATTTCAAGGTGACCGCCGAGATGTACTATAAAAAGCTGGACAATCTGAATC
CCTACACCGTAGATAACGTCAAGATCCGCTATTACGGCGAGAATTGCGCCAAAGGTTACGCCATGGGACTCGATGTCAAA
TTCTTCGGAGAATTCGTACCGGGTACCGACTCATGGATCAGCTTCTCCTTGATGAAAGCCCAGCAAACCATCCGGGAAAC
AACGACCGTTCCTATGGCCAATAGCCAAGGCTACAACATCTCACTCTTCTTCCAAGATTATTTCCCGGGCTATAAACGAG
TCAAGCTAAATCTGAAAGGAGTTCTATCCGGAGGACTTCCCCAGACAATCCCGGGCAAAGGATACGAAGCCGGCTATTTC
CGTACGCCCGCCTACAAACGTGTAGATATCGGCCTCTCCTACCAATTGGCAGGAGGCACGGACGCTATCATGGACAGGGG
CTTCTTCCGCCATTTGAAAAACATTTGGCTAGGTCTGGATGTATTTAACATATTAGACATCAAAAACGTTAGTTCCTATT
ATTGGATAACAGATGTATATAATGTCCAATACGCAGTTCCAAACTATCTGACCGGACGTCAATTGAACGTTCGTCTGATT
GTCGATTTTTAA

Upstream 100 bases:

>100_bases
TTTAATATTAAGATTCGCAAATATAAATATAATTTTTTGCACCCATATATACGTATCGTTCTTTTTTCTCGTTAGTATTT
TTATAATTGAACAATAGATT

Downstream 100 bases:

>100_bases
TAAAATGTATCTTTAAACACATTTACTGGGAGATAAAAACAAAAAATTATTTCCTCATTCATAAAAAGTAGTGTACATTT
GCACACAATAGAAACAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NB-Dependent Receptor; Nb-Dependent Receptor Plug; Outer Membrane Protein; NB Dependent/Ligand-Gated Channel; NB-Dependent Outer Membrane Receptor Protein; Nb-Dependent Receptor; NB-Dependent Receptor Domain-Containing Protein; NB-Dependent Receptor Domain Protein; NB-Dependent Outer Membrane Receptor; Outer Membrane Receptor Protein

Number of amino acids: Translated: 803; Mature: 803

Protein sequence:

>803_residues
MKIRAIAALLFILISVSAFGEGRIKITGYVRDADGNPLELVNVRVKNTLIGSMTNEKGYYSFSISPGDSISIIYSCLGYN
KAERIIPSAQADMRLNVQMNNTSFDLGEVSVTAIRKQTTTMESLNADKIKLLPDPSGGSIESLVVTFAGVSSNNELSSQY
SVRGGSYDENIVYVNGIEVFRPLLIRSGQQEGLSFINPDLTEAVNFAAGGFEARYGDKMSSVLDITYKKPKIFEGSASAS
LLGANAYVGSSIGKFTQVTGFRFKSGRSILGTMDTDAEYDPKFIDLQTYITYQLAPKWEINFLGNLANNNYKFTPYSRET
SFGTAEHPKNFKVYFDGRERDRFQTLFGALTLKHNPNENTELGLQASAFKSKEEEGYDIAGEYWLSENGAENPDDDASAA
MSVGRYHEHARNRLNSTVMNVGHYGMARLLNNTLKWGATVQMEKINDKISEWEKRDSSGYSLPQTGNNVSVYSNLFSDNQ
IESTRFSAYAQDAFKFRTKQGLFTLVAGVRGSYWTYNKEFLFSPRASLGFIPNFDQDLTLRFATGLYYQSPFYKELRRVD
KDKNGNNITVLNKDLKSQRSIHFILGGDYTFRAVDRNFKVTAEMYYKKLDNLNPYTVDNVKIRYYGENCAKGYAMGLDVK
FFGEFVPGTDSWISFSLMKAQQTIRETTTVPMANSQGYNISLFFQDYFPGYKRVKLNLKGVLSGGLPQTIPGKGYEAGYF
RTPAYKRVDIGLSYQLAGGTDAIMDRGFFRHLKNIWLGLDVFNILDIKNVSSYYWITDVYNVQYAVPNYLTGRQLNVRLI
VDF

Sequences:

>Translated_803_residues
MKIRAIAALLFILISVSAFGEGRIKITGYVRDADGNPLELVNVRVKNTLIGSMTNEKGYYSFSISPGDSISIIYSCLGYN
KAERIIPSAQADMRLNVQMNNTSFDLGEVSVTAIRKQTTTMESLNADKIKLLPDPSGGSIESLVVTFAGVSSNNELSSQY
SVRGGSYDENIVYVNGIEVFRPLLIRSGQQEGLSFINPDLTEAVNFAAGGFEARYGDKMSSVLDITYKKPKIFEGSASAS
LLGANAYVGSSIGKFTQVTGFRFKSGRSILGTMDTDAEYDPKFIDLQTYITYQLAPKWEINFLGNLANNNYKFTPYSRET
SFGTAEHPKNFKVYFDGRERDRFQTLFGALTLKHNPNENTELGLQASAFKSKEEEGYDIAGEYWLSENGAENPDDDASAA
MSVGRYHEHARNRLNSTVMNVGHYGMARLLNNTLKWGATVQMEKINDKISEWEKRDSSGYSLPQTGNNVSVYSNLFSDNQ
IESTRFSAYAQDAFKFRTKQGLFTLVAGVRGSYWTYNKEFLFSPRASLGFIPNFDQDLTLRFATGLYYQSPFYKELRRVD
KDKNGNNITVLNKDLKSQRSIHFILGGDYTFRAVDRNFKVTAEMYYKKLDNLNPYTVDNVKIRYYGENCAKGYAMGLDVK
FFGEFVPGTDSWISFSLMKAQQTIRETTTVPMANSQGYNISLFFQDYFPGYKRVKLNLKGVLSGGLPQTIPGKGYEAGYF
RTPAYKRVDIGLSYQLAGGTDAIMDRGFFRHLKNIWLGLDVFNILDIKNVSSYYWITDVYNVQYAVPNYLTGRQLNVRLI
VDF
>Mature_803_residues
MKIRAIAALLFILISVSAFGEGRIKITGYVRDADGNPLELVNVRVKNTLIGSMTNEKGYYSFSISPGDSISIIYSCLGYN
KAERIIPSAQADMRLNVQMNNTSFDLGEVSVTAIRKQTTTMESLNADKIKLLPDPSGGSIESLVVTFAGVSSNNELSSQY
SVRGGSYDENIVYVNGIEVFRPLLIRSGQQEGLSFINPDLTEAVNFAAGGFEARYGDKMSSVLDITYKKPKIFEGSASAS
LLGANAYVGSSIGKFTQVTGFRFKSGRSILGTMDTDAEYDPKFIDLQTYITYQLAPKWEINFLGNLANNNYKFTPYSRET
SFGTAEHPKNFKVYFDGRERDRFQTLFGALTLKHNPNENTELGLQASAFKSKEEEGYDIAGEYWLSENGAENPDDDASAA
MSVGRYHEHARNRLNSTVMNVGHYGMARLLNNTLKWGATVQMEKINDKISEWEKRDSSGYSLPQTGNNVSVYSNLFSDNQ
IESTRFSAYAQDAFKFRTKQGLFTLVAGVRGSYWTYNKEFLFSPRASLGFIPNFDQDLTLRFATGLYYQSPFYKELRRVD
KDKNGNNITVLNKDLKSQRSIHFILGGDYTFRAVDRNFKVTAEMYYKKLDNLNPYTVDNVKIRYYGENCAKGYAMGLDVK
FFGEFVPGTDSWISFSLMKAQQTIRETTTVPMANSQGYNISLFFQDYFPGYKRVKLNLKGVLSGGLPQTIPGKGYEAGYF
RTPAYKRVDIGLSYQLAGGTDAIMDRGFFRHLKNIWLGLDVFNILDIKNVSSYYWITDVYNVQYAVPNYLTGRQLNVRLI
VDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90291; Mature: 90291

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRAIAALLFILISVSAFGEGRIKITGYVRDADGNPLELVNVRVKNTLIGSMTNEKGYY
CCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEEEEEEEEEEECCCCCCCEE
SFSISPGDSISIIYSCLGYNKAERIIPSAQADMRLNVQMNNTSFDLGEVSVTAIRKQTTT
EEEECCCCCHHHHHHHHCCCHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEEEHHHHHHH
MESLNADKIKLLPDPSGGSIESLVVTFAGVSSNNELSSQYSVRGGSYDENIVYVNGIEVF
HHHCCCCEEEEEECCCCCCHHEEEEEEECCCCCCCCCCEEEECCCCCCCCEEEEECHHHH
RPLLIRSGQQEGLSFINPDLTEAVNFAAGGFEARYGDKMSSVLDITYKKPKIFEGSASAS
HHHHHCCCCHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHEEEEEECCCEEECCCCCCE
LLGANAYVGSSIGKFTQVTGFRFKSGRSILGTMDTDAEYDPKFIDLQTYITYQLAPKWEI
EEECCCHHCCCCCCHHHCCCEEECCCCEEEEECCCCCCCCCCEEEEEEEEEEEECCCEEE
NFLGNLANNNYKFTPYSRETSFGTAEHPKNFKVYFDGRERDRFQTLFGALTLKHNPNENT
EEEEEECCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHEEEEEECCCCCC
ELGLQASAFKSKEEEGYDIAGEYWLSENGAENPDDDASAAMSVGRYHEHARNRLNSTVMN
CCCEEHHHHCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VGHYGMARLLNNTLKWGATVQMEKINDKISEWEKRDSSGYSLPQTGNNVSVYSNLFSDNQ
CCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHCCCCC
IESTRFSAYAQDAFKFRTKQGLFTLVAGVRGSYWTYNKEFLFSPRASLGFIPNFDQDLTL
CCHHHHHHHHHHHHHHHHHCCCEEEHHCCCCCEEEECCEEEECCCCCCCCCCCCCCCEEE
RFATGLYYQSPFYKELRRVDKDKNGNNITVLNKDLKSQRSIHFILGGDYTFRAVDRNFKV
EEEECCEECCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEECCCCEE
TAEMYYKKLDNLNPYTVDNVKIRYYGENCAKGYAMGLDVKFFGEFVPGTDSWISFSLMKA
HHHHHHHHHCCCCCEEECCEEEEEECCCCCCCEEEECCHHHHHCCCCCCCCCEEHHHHHH
QQTIRETTTVPMANSQGYNISLFFQDYFPGYKRVKLNLKGVLSGGLPQTIPGKGYEAGYF
HHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCEE
RTPAYKRVDIGLSYQLAGGTDAIMDRGFFRHLKNIWLGLDVFNILDIKNVSSYYWITDVY
ECCCCEEEEECEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCEEEEEEEE
NVQYAVPNYLTGRQLNVRLIVDF
EEEEECCCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MKIRAIAALLFILISVSAFGEGRIKITGYVRDADGNPLELVNVRVKNTLIGSMTNEKGYY
CCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEEEEEEEEEEECCCCCCCEE
SFSISPGDSISIIYSCLGYNKAERIIPSAQADMRLNVQMNNTSFDLGEVSVTAIRKQTTT
EEEECCCCCHHHHHHHHCCCHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEEEHHHHHHH
MESLNADKIKLLPDPSGGSIESLVVTFAGVSSNNELSSQYSVRGGSYDENIVYVNGIEVF
HHHCCCCEEEEEECCCCCCHHEEEEEEECCCCCCCCCCEEEECCCCCCCCEEEEECHHHH
RPLLIRSGQQEGLSFINPDLTEAVNFAAGGFEARYGDKMSSVLDITYKKPKIFEGSASAS
HHHHHCCCCHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHEEEEEECCCEEECCCCCCE
LLGANAYVGSSIGKFTQVTGFRFKSGRSILGTMDTDAEYDPKFIDLQTYITYQLAPKWEI
EEECCCHHCCCCCCHHHCCCEEECCCCEEEEECCCCCCCCCCEEEEEEEEEEEECCCEEE
NFLGNLANNNYKFTPYSRETSFGTAEHPKNFKVYFDGRERDRFQTLFGALTLKHNPNENT
EEEEEECCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHEEEEEECCCCCC
ELGLQASAFKSKEEEGYDIAGEYWLSENGAENPDDDASAAMSVGRYHEHARNRLNSTVMN
CCCEEHHHHCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VGHYGMARLLNNTLKWGATVQMEKINDKISEWEKRDSSGYSLPQTGNNVSVYSNLFSDNQ
CCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHCCCCC
IESTRFSAYAQDAFKFRTKQGLFTLVAGVRGSYWTYNKEFLFSPRASLGFIPNFDQDLTL
CCHHHHHHHHHHHHHHHHHCCCEEEHHCCCCCEEEECCEEEECCCCCCCCCCCCCCCEEE
RFATGLYYQSPFYKELRRVDKDKNGNNITVLNKDLKSQRSIHFILGGDYTFRAVDRNFKV
EEEECCEECCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEECCCCEE
TAEMYYKKLDNLNPYTVDNVKIRYYGENCAKGYAMGLDVKFFGEFVPGTDSWISFSLMKA
HHHHHHHHHCCCCCEEECCEEEEEECCCCCCCEEEECCHHHHHCCCCCCCCCEEHHHHHH
QQTIRETTTVPMANSQGYNISLFFQDYFPGYKRVKLNLKGVLSGGLPQTIPGKGYEAGYF
HHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCEE
RTPAYKRVDIGLSYQLAGGTDAIMDRGFFRHLKNIWLGLDVFNILDIKNVSSYYWITDVY
ECCCCEEEEECEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCEEEEEEEE
NVQYAVPNYLTGRQLNVRLIVDF
EEEEECCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA