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The map label for this gene is blc [H]

Identifier: 150006792

GI number: 150006792

Start: 127832

End: 128374

Strand: Reverse

Name: blc [H]

Synonym: BDI_0118

Alternate gene names: 150006792

Gene position: 128374-127832 (Counterclockwise)

Preceding gene: 150006803

Following gene: 150006791

Centisome position: 2.67

GC content: 38.31

Gene sequence:

>543_bases
ATGCGATTTAAACTAATAGGCCTCATCTGTCTTATAATGCAGTGTAATTTATCTTGCACTCAACACATTATAAACAAAGA
AACCGTCCAGACTTTGGATTTACACCGCTATATGGGGAAATGGTTTGAAATAGCACGCTTTGATCATCGCTTTGAGCATA
ATCTCGTAGGGGCTACCGTGGAATACTCATTTCTCCCGAATGGAGATATAGAAGTTGTTAACAGCGGATATTGGGGTAAT
TTTTCCGGTTCCTTCAAACGAGCGAAAGATATAGCCAAAATAACAGATCCTACGTGTCCTAGTAAATTAAAAGTGTGTTT
CTTTATGCGGTTCTACGCCGAGTACAACATTATGGAAATTGACGAGGATAATTACTCATACGCTCTCGTAGGCAGTAATA
CCTCAGACTATTTATGGCTACTTAGTCGTACGCCTACACTCCCTGAAGAGGCTATTCTCTTTTTATTGACTAAGGCCAAA
GAAAGAGGATATAACACATCAATGCTCAAATGGGTCAAACAAAAACATGAAAATCAAAAATAA

Upstream 100 bases:

>100_bases
TAAAGCACAGATTGTCGAAAAAATAAAAATCCTAAAATATGAACGTTTTCAAACTTTTTAGAGGCTCTCTATGTTTATTA
TGAGATAAAAATAAAAACCT

Downstream 100 bases:

>100_bases
TTTCTTCAAATTTCGCTATAAGCATTGAAAATATTCAACTTATGGCTAATTTTGTTGTTATAATATAAAAAGCGTTGTTT
TATGAAAAAAATATTACAAG

Product: putative sugar nucleotide epimerase

Products: NA

Alternate protein names: Protein vlp [H]

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MRFKLIGLICLIMQCNLSCTQHIINKETVQTLDLHRYMGKWFEIARFDHRFEHNLVGATVEYSFLPNGDIEVVNSGYWGN
FSGSFKRAKDIAKITDPTCPSKLKVCFFMRFYAEYNIMEIDEDNYSYALVGSNTSDYLWLLSRTPTLPEEAILFLLTKAK
ERGYNTSMLKWVKQKHENQK

Sequences:

>Translated_180_residues
MRFKLIGLICLIMQCNLSCTQHIINKETVQTLDLHRYMGKWFEIARFDHRFEHNLVGATVEYSFLPNGDIEVVNSGYWGN
FSGSFKRAKDIAKITDPTCPSKLKVCFFMRFYAEYNIMEIDEDNYSYALVGSNTSDYLWLLSRTPTLPEEAILFLLTKAK
ERGYNTSMLKWVKQKHENQK
>Mature_180_residues
MRFKLIGLICLIMQCNLSCTQHIINKETVQTLDLHRYMGKWFEIARFDHRFEHNLVGATVEYSFLPNGDIEVVNSGYWGN
FSGSFKRAKDIAKITDPTCPSKLKVCFFMRFYAEYNIMEIDEDNYSYALVGSNTSDYLWLLSRTPTLPEEAILFLLTKAK
ERGYNTSMLKWVKQKHENQK

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Escherichia coli, GI1790592, Length=164, Percent_Identity=37.8048780487805, Blast_Score=117, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 21075; Mature: 21075

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFKLIGLICLIMQCNLSCTQHIINKETVQTLDLHRYMGKWFEIARFDHRFEHNLVGATV
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCEE
EYSFLPNGDIEVVNSGYWGNFSGSFKRAKDIAKITDPTCPSKLKVCFFMRFYAEYNIMEI
EEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEE
DEDNYSYALVGSNTSDYLWLLSRTPTLPEEAILFLLTKAKERGYNTSMLKWVKQKHENQK
CCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRFKLIGLICLIMQCNLSCTQHIINKETVQTLDLHRYMGKWFEIARFDHRFEHNLVGATV
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCEE
EYSFLPNGDIEVVNSGYWGNFSGSFKRAKDIAKITDPTCPSKLKVCFFMRFYAEYNIMEI
EEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEE
DEDNYSYALVGSNTSDYLWLLSRTPTLPEEAILFLLTKAKERGYNTSMLKWVKQKHENQK
CCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8514410; 10952301 [H]