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The map label for this gene is 150006595

Identifier: 150006595

GI number: 150006595

Start: 5061960

End: 5062595

Strand: Reverse

Name: 150006595

Synonym: BVU_4115

Alternate gene names: NA

Gene position: 5062595-5061960 (Counterclockwise)

Preceding gene: 150006596

Following gene: 150006594

Centisome position: 98.05

GC content: 37.11

Gene sequence:

>636_bases
ATGGTTGATAGAACACATGGTGAAACTAAACTTTGGGAATCTTTTATTAAAGGAGAAACGGCGGCATTTGAAGAAGTTTA
TCGACGCTATTATTCGTTATTGTATTCCTATGGAATTCGTATGGTAGGTGACAGAGAGCTGGTTGCCGATACCATACAGA
ATCTGTTCGTCAAGTTGATTTTAAATTGTAGGAATTTGCATTATACTGATAATGTAAAAGCGTATTTGCTTTGTTCTTTT
AGAAATAAACTGCTGGATGCGTTTCAGTCTTTACGTCCTATGGAAGTGATTGAAGAATGCCATGAGTTTTTTCCGATGGG
CGAAGAAATAATAAATTCTTTATTTAAGAAAGATGATGTGGATGTGAAGAATGAAAGAAGGCTGGCTAAGGCAATTTCAC
GTCTTTCCGGTCGTCAGCGTGAAATTCTGTATTTATATTATGTAAAAGAATTGAGCCATCAGGAAATATCCGCTATCTTA
GGTATGAATCCTCAATCAAGCAAGAATCTTTTGTCGCGTACATTGGCACGTTTGCGTGAATTCTTTTTCTCTGTTTCAAC
CATATGGATTTTCAGTATCTTGGTGCATTGTGTTCATGTGCCTGTGCGTAGTGTTTGGGCTTTTCACTTCTCTTGA

Upstream 100 bases:

>100_bases
AAAGTAAGAGATGAATTCATTACATGGTTCATCTCTTATATTGCCTTCTTGTTAAGTTTAACTCTGAGCAAGCTCAATAA
GTTTTTAAGGAGCTAGTATT

Downstream 100 bases:

>100_bases
TTTAGCGAGTAGTTAATCATTGTTGTTTTATCATTTGGGCATGTTTTCATGGAATGAAGTGATATTTGTGTGATGAATAA
GTTCTTTTATTTGTCATATA

Product: RNA polymerase ECF-type sigma factor

Products: NA

Alternate protein names: RNA Polymerase ECF-Type Sigma Factor; ECF-Type Sigma Factor; Transcriptional Regulator LuxR Family; RNA Polymerase Sigma Factor Sigma-70 Family; RNA Polymerase Sigma Factor; Sigma-70 Region 4 Subfamily; RNA Polymerase Sigma

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MVDRTHGETKLWESFIKGETAAFEEVYRRYYSLLYSYGIRMVGDRELVADTIQNLFVKLILNCRNLHYTDNVKAYLLCSF
RNKLLDAFQSLRPMEVIEECHEFFPMGEEIINSLFKKDDVDVKNERRLAKAISRLSGRQREILYLYYVKELSHQEISAIL
GMNPQSSKNLLSRTLARLREFFFSVSTIWIFSILVHCVHVPVRSVWAFHFS

Sequences:

>Translated_211_residues
MVDRTHGETKLWESFIKGETAAFEEVYRRYYSLLYSYGIRMVGDRELVADTIQNLFVKLILNCRNLHYTDNVKAYLLCSF
RNKLLDAFQSLRPMEVIEECHEFFPMGEEIINSLFKKDDVDVKNERRLAKAISRLSGRQREILYLYYVKELSHQEISAIL
GMNPQSSKNLLSRTLARLREFFFSVSTIWIFSILVHCVHVPVRSVWAFHFS
>Mature_211_residues
MVDRTHGETKLWESFIKGETAAFEEVYRRYYSLLYSYGIRMVGDRELVADTIQNLFVKLILNCRNLHYTDNVKAYLLCSF
RNKLLDAFQSLRPMEVIEECHEFFPMGEEIINSLFKKDDVDVKNERRLAKAISRLSGRQREILYLYYVKELSHQEISAIL
GMNPQSSKNLLSRTLARLREFFFSVSTIWIFSILVHCVHVPVRSVWAFHFS

Specific function: Unknown

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24919; Mature: 24919

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDRTHGETKLWESFIKGETAAFEEVYRRYYSLLYSYGIRMVGDRELVADTIQNLFVKLI
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHH
LNCRNLHYTDNVKAYLLCSFRNKLLDAFQSLRPMEVIEECHEFFPMGEEIINSLFKKDDV
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCC
DVKNERRLAKAISRLSGRQREILYLYYVKELSHQEISAILGMNPQSSKNLLSRTLARLRE
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
FFFSVSTIWIFSILVHCVHVPVRSVWAFHFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVDRTHGETKLWESFIKGETAAFEEVYRRYYSLLYSYGIRMVGDRELVADTIQNLFVKLI
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHH
LNCRNLHYTDNVKAYLLCSFRNKLLDAFQSLRPMEVIEECHEFFPMGEEIINSLFKKDDV
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCC
DVKNERRLAKAISRLSGRQREILYLYYVKELSHQEISAILGMNPQSSKNLLSRTLARLRE
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
FFFSVSTIWIFSILVHCVHVPVRSVWAFHFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA