| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is fecR [C]
Identifier: 150006594
GI number: 150006594
Start: 5060665
End: 5061747
Strand: Reverse
Name: fecR [C]
Synonym: BVU_4114
Alternate gene names: 150006594
Gene position: 5061747-5060665 (Counterclockwise)
Preceding gene: 150006595
Following gene: 150006593
Centisome position: 98.04
GC content: 36.93
Gene sequence:
>1083_bases ATGAAAAATAAAAAAACAATATATAATTCAGATGAATTTCGTAAAACAGTTCAATGCCTGACTGAGAAGATTCGGGAAGC AGATGAACTGGAATCTGTTGATGTAGACAAATCTTTTCAGGACGTGATGAAACGAGTAGGAAGGGAAAAAAAGGTTCCCC ACAGACGTCATATTTATAGGTGGTCTTTGTCGATAGCGGCAGCGATTGCTTTGGCTTTAGTTATGAACTGGTGGAGTACC AATGTTGATGAGGGTACGGAGCTTGATATAGCATTGCTGAATGACACGACTTCCATTTGCGGTGATGAGGTGATTCTGAT AACAGATAACCAAGCTATGAATCTGAAAAATGATGCTTCTTTAAAATATGATACTTTAGGAAGTTCGAATATTCAGCAGT ATGCATTAAATACTAAAATATCCCAGGCTTCATCTGTAAAGAATGAAATGCATCAAATAATGGTTCCTAATGGGAAAAGA GCTGATATTACTTTTTCTGATGGTACTAGAATTTATATAAATTCAGGTAGTAAAGTGATATATCCGGATATTTTTGAAGA ACGGAAACGTGAAATCTTGGTAGAGGGGGAGGTTTATCTGGATGTAGCCAAAAGGAAGGATTGCCCATTTGTTGTCAAAA CAAGAGAGTTTGATATACGCGTGCTGGGTACTTCGTTTAATGTCTGTGCCTATAGGGAGGATGAGGCTGCATCTGTTGTT TTAGTACGTGGAAGCGTGGAAGTAACTACTGAGAATAAGAGCAAAGTAAGATTAGCACCTAATCAATTGGTGGATATTAA AGGCAATAAAACGCAGGTACGTAAGGTTGATGTGTCCGAATACATCAGTTGGAAGGATAATTTATTGCTGCTTCATCAAA GACCCGTAGGAGATGTTTTAAAGAAGCTTGAGCGGTATTATGGGTGTAAAATACGGTATGATGCAGAGATTACGACCTTG TCATTGTCAGGAAAACTGGATCTTCAAACAGATATTACCAATGTTATGGATAACTTATGTCTTTCATTATCATTGCATTA TACAATAAATGATAAAGATGAAATCTATGTGAGCCTTAAATGA
Upstream 100 bases:
>100_bases TGGTTTTGCGAAGGCTCATGCAAAGAAAAGTGTGATTTCTTTTCTTTTTTATGAGTACCTTTTTTATCGGGCACCGTTTT CTTAATAAAAAGGTTTTTCG
Downstream 100 bases:
>100_bases GAATTGTTGAACCTTAAAATACTTTAGCCTATGGAATAAAAGAAGGATGTAAAAAAAGAAAACCAGACAGTATTTGCCGT ACTATCTGGTCACTGAATCG
Product: putative anti-sigma factor
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MKNKKTIYNSDEFRKTVQCLTEKIREADELESVDVDKSFQDVMKRVGREKKVPHRRHIYRWSLSIAAAIALALVMNWWST NVDEGTELDIALLNDTTSICGDEVILITDNQAMNLKNDASLKYDTLGSSNIQQYALNTKISQASSVKNEMHQIMVPNGKR ADITFSDGTRIYINSGSKVIYPDIFEERKREILVEGEVYLDVAKRKDCPFVVKTREFDIRVLGTSFNVCAYREDEAASVV LVRGSVEVTTENKSKVRLAPNQLVDIKGNKTQVRKVDVSEYISWKDNLLLLHQRPVGDVLKKLERYYGCKIRYDAEITTL SLSGKLDLQTDITNVMDNLCLSLSLHYTINDKDEIYVSLK
Sequences:
>Translated_360_residues MKNKKTIYNSDEFRKTVQCLTEKIREADELESVDVDKSFQDVMKRVGREKKVPHRRHIYRWSLSIAAAIALALVMNWWST NVDEGTELDIALLNDTTSICGDEVILITDNQAMNLKNDASLKYDTLGSSNIQQYALNTKISQASSVKNEMHQIMVPNGKR ADITFSDGTRIYINSGSKVIYPDIFEERKREILVEGEVYLDVAKRKDCPFVVKTREFDIRVLGTSFNVCAYREDEAASVV LVRGSVEVTTENKSKVRLAPNQLVDIKGNKTQVRKVDVSEYISWKDNLLLLHQRPVGDVLKKLERYYGCKIRYDAEITTL SLSGKLDLQTDITNVMDNLCLSLSLHYTINDKDEIYVSLK >Mature_360_residues MKNKKTIYNSDEFRKTVQCLTEKIREADELESVDVDKSFQDVMKRVGREKKVPHRRHIYRWSLSIAAAIALALVMNWWST NVDEGTELDIALLNDTTSICGDEVILITDNQAMNLKNDASLKYDTLGSSNIQQYALNTKISQASSVKNEMHQIMVPNGKR ADITFSDGTRIYINSGSKVIYPDIFEERKREILVEGEVYLDVAKRKDCPFVVKTREFDIRVLGTSFNVCAYREDEAASVV LVRGSVEVTTENKSKVRLAPNQLVDIKGNKTQVRKVDVSEYISWKDNLLLLHQRPVGDVLKKLERYYGCKIRYDAEITTL SLSGKLDLQTDITNVMDNLCLSLSLHYTINDKDEIYVSLK
Specific function: Regulation Of Iron Dicitrate Transport. In The Absence Of Citrate Fecr Inactivates Feci. Fecr Is Probably A Sensor That Recognizes Iron Dicitrate In The Periplasm. [C]
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41093; Mature: 41093
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKKTIYNSDEFRKTVQCLTEKIREADELESVDVDKSFQDVMKRVGREKKVPHRRHIYR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHEEE WSLSIAAAIALALVMNWWSTNVDEGTELDIALLNDTTSICGDEVILITDNQAMNLKNDAS EHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHCCCEEEEEECCCCCCCCCCCC LKYDTLGSSNIQQYALNTKISQASSVKNEMHQIMVPNGKRADITFSDGTRIYINSGSKVI EEEECCCCCCHHHHHHCCCHHHHHHHHHHHHEEECCCCCEEEEEECCCCEEEEECCCEEE YPDIFEERKREILVEGEVYLDVAKRKDCPFVVKTREFDIRVLGTSFNVCAYREDEAASVV ECCHHHHCCCEEEEECEEEEEEECCCCCCEEEEECEEEEEEECCCCEEEEECCCCCCEEE LVRGSVEVTTENKSKVRLAPNQLVDIKGNKTQVRKVDVSEYISWKDNLLLLHQRPVGDVL EEECEEEEEECCCCEEEECCCEEEEECCCCEEEEEECHHHHHCCCCCEEEEECCCHHHHH KKLERYYGCKIRYDAEITTLSLSGKLDLQTDITNVMDNLCLSLSLHYTINDKDEIYVSLK HHHHHHHCCEEEECCEEEEEEECCCEEEHHHHHHHHHHHEEEEEEEEEECCCCEEEEEEC >Mature Secondary Structure MKNKKTIYNSDEFRKTVQCLTEKIREADELESVDVDKSFQDVMKRVGREKKVPHRRHIYR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHEEE WSLSIAAAIALALVMNWWSTNVDEGTELDIALLNDTTSICGDEVILITDNQAMNLKNDAS EHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHCCCEEEEEECCCCCCCCCCCC LKYDTLGSSNIQQYALNTKISQASSVKNEMHQIMVPNGKRADITFSDGTRIYINSGSKVI EEEECCCCCCHHHHHHCCCHHHHHHHHHHHHEEECCCCCEEEEEECCCCEEEEECCCEEE YPDIFEERKREILVEGEVYLDVAKRKDCPFVVKTREFDIRVLGTSFNVCAYREDEAASVV ECCHHHHCCCEEEEECEEEEEEECCCCCCEEEEECEEEEEEECCCCEEEEECCCCCCEEE LVRGSVEVTTENKSKVRLAPNQLVDIKGNKTQVRKVDVSEYISWKDNLLLLHQRPVGDVL EEECEEEEEECCCCEEEECCCEEEEECCCCEEEEEECHHHHHCCCCCEEEEECCCHHHHH KKLERYYGCKIRYDAEITTLSLSGKLDLQTDITNVMDNLCLSLSLHYTINDKDEIYVSLK HHHHHHHCCEEEECCEEEEEEECCCEEEHHHHHHHHHHHEEEEEEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA