Definition Bacteroides vulgatus ATCC 8482 chromosome, complete genome.
Accession NC_009614
Length 5,163,189

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The map label for this gene is yuxL [H]

Identifier: 150006563

GI number: 150006563

Start: 5025013

End: 5027463

Strand: Reverse

Name: yuxL [H]

Synonym: BVU_4083

Alternate gene names: 150006563

Gene position: 5027463-5025013 (Counterclockwise)

Preceding gene: 150006564

Following gene: 150006560

Centisome position: 97.37

GC content: 46.59

Gene sequence:

>2451_bases
ATGAAGAAACAAATCTTATTGTCTTGTGCACTTGCCTGGGCTGTGATGGCAGGTGCTGAAACGATTGACATTACTACTTT
CCGTTATGCCGGCCCCTACGTTGTACAGGCCCCTTTTCAGGTGGACAGCGTGGATGTGAATTCAAAGACTTTTGTATCCG
GACGTCTGTTGGACACTCATCTTTCTGTGGACGTATTGCAACAGGGAACTTTATTTACAGGCGGGGTTTTGCCGGGAAGT
GACTCGGGATATGCCTTGCACATGATGGGTTTTGTGTTGGAGAATACTCGTTATGCCACAGCCAAGCTGAAGATTGACGG
GCTGAAAAGATACCAGCTTTATGTAGATGGAAAGAAGCAGGAAGGAACTGAACTCGCTTTGGAGCCGGCCACCCATTCTG
TAGTTATTAAATATCTTTCTGAAGCAGGGAAAACAGATTCCTTGAAAGTGAGTGTGGATACGGATCAAGAGGGAAGCATT
TCACTTAAGCAAGATAACAAAAAGCTATATACTTTGGCGGATGTGTTGCATGGAACTCGTTTTGCCGGAGTAGGGCTTTC
CCCTGATGGCAGATATTTGATTGCCAATTATCGTACGACTTATGTAGGTGGTCGGTCAGCCGGTAGTACGCGCATTACTG
AACTTGCCAGCGGTAAGGTTTTGGCGGAGCGTACTGAAAATATGCAATGGATGCCTCGTTCTAACCGTTATTATTATACC
CGTACGGGGGTGGATGGCAGGCAGCTGATAGTTGTGGATCCGCTTACCGGAATGGAAACTGTGCTGGTGAATAAATTACC
TGACGGGTATTTCCAGTTCGCACCTACGGAAGACTACCTGCTTTTCACCATGACCCAGGAAGGTCCGAAAGAACGTAAAG
AAATTTATGAGGTCCTGGAACCGGATGATCGCCAGCCGGGGTGGCGTAACCGTTCTTATCTGGCTAAATATGATTTGAAG
ACCGGTTTGTTGCAGCCACTGACTTTCGGTTATCACAATGTCTGGGCTGCCGATATTTCCAATGACGGCCGGTATCTTTT
GATGATGACCAGTCAGAGCCGTCTGACCAAGCGTCCTACTACTTTATTCTCACTATATCGGTTGGATATGCAGACTTTAC
AGGCGGAACTGCTGATAGATAAAGATGGTTTTATCAGTGGAGCCCGTTTTTCACCTGACGGAACGCAGGTATTGGTATCC
GGCTCGCCTGAATCGCTGGGTGGAATAGGGAAAAATGTAAAGGAGGGGCAGACTCCGAGTATGACGGACGGTCAGCTTTA
TTTGCTGAATATAGCTGATAAGAGAGTCACTCCGCTGACGAAAGATTTTAATCCCAGCGTACAGCGTGCCGTGTGGAATA
AGGCCGACGGGCAAATATATTTCACGGCCGAGAACCGTGACTGTTACAGTTTGTACCGGATGAATCCCGCTGATGGGAAA
ATTCAGCAACTGGAGGTTTCAGAAGATTTGGTCAACTCATTCTCATTGGCGCAAAATGCTCCGGTTATGGTCTATTATGG
ACAGAGCGCCTCAAATTCCGACCGTTTATACACCATGAATACCAAAAAGATGAAATCATCTTTGTTGGAAGACTTAAGTA
AAGACATATTGAAAGATGTGGAGCTGGGCGAATGCAAGGCCTGGAGTTTTACCAATTCTCGTGGTGATACCATTTATGGT
CGTTATTACCTGCCGCCTCATTTTGACGCCAACCGGAAATATCCTATGATTGTGAATTATTATGGTGGGTGCAGTCCGGT
CAGCCGTAATTTCGAAAGCCGTTATCCGCATCATGCATACGCGGCATTGGGCTATGTGGTGTATGTGATAGAACCTAGCG
GTGCTACCGGTTTCGGACAGGAATTTTCTGCCCGCCACGTCAATACAGCTGGGGAAGGGGTGGCACAGGATATCATAGAA
GGTACAAAGCAGTTTTGTAAAGAACATGCTTTTGTCAATGACAAGAAAATAGGCTGTATAGGTGCATCCTATGGCGGCTT
CATGACACAATACCTGCAAACACAGACCGATATTTTTGCAGCGGCCATCTCTCATGCCGGTATCAGTGATCATACCAGTT
ATTGGGGGGAAGGATATTGGGGATATTCGTACAGTGAAGTTTCCATGGCGAATAGTTATCCGTGGAGCAATCCTGATCTT
TTTGTAAAACAAAGCCCGTTGTTCAATGCGGACAAGATACATACGCCTTTGCTGTTCTTGCACGGTGATGCGGATGTGAA
TGTACCGGTGGGAGAGAGCATTCAGATGTTTACAGCACTGAAGTTACTGGGGCGCGAAACGGCTTTTGTGGCTGTAACGG
GACAAGATCATCATATAGTGGATTATGGCAAGAGGATTCAGTGGCAGAACACGATTTTTGCCTGGTTTGCCAAATGGTTG
CAGGATGATGCGACTTGGTGGAACGCTATTTATAAGCCGAAGGCTTTATAG

Upstream 100 bases:

>100_bases
GAGGTGAAATAATATGTTGTAGGAAGCATTGAAAATCGTAGGAAAAGGTTTTTGTTTCTTTTATATTTCGTATCTTTGTG
TAACACAAATTGTTAGAAAT

Downstream 100 bases:

>100_bases
ATGAATAATAAAAGAAGGTGCGTCGTAATGTGAACTGCACCTTCTTTTTATGTTTGTTATACCGATTCATTGATAATTTC
CCAGCCATTAATTTTTATAC

Product: putative alanyl dipeptidyl peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 816; Mature: 816

Protein sequence:

>816_residues
MKKQILLSCALAWAVMAGAETIDITTFRYAGPYVVQAPFQVDSVDVNSKTFVSGRLLDTHLSVDVLQQGTLFTGGVLPGS
DSGYALHMMGFVLENTRYATAKLKIDGLKRYQLYVDGKKQEGTELALEPATHSVVIKYLSEAGKTDSLKVSVDTDQEGSI
SLKQDNKKLYTLADVLHGTRFAGVGLSPDGRYLIANYRTTYVGGRSAGSTRITELASGKVLAERTENMQWMPRSNRYYYT
RTGVDGRQLIVVDPLTGMETVLVNKLPDGYFQFAPTEDYLLFTMTQEGPKERKEIYEVLEPDDRQPGWRNRSYLAKYDLK
TGLLQPLTFGYHNVWAADISNDGRYLLMMTSQSRLTKRPTTLFSLYRLDMQTLQAELLIDKDGFISGARFSPDGTQVLVS
GSPESLGGIGKNVKEGQTPSMTDGQLYLLNIADKRVTPLTKDFNPSVQRAVWNKADGQIYFTAENRDCYSLYRMNPADGK
IQQLEVSEDLVNSFSLAQNAPVMVYYGQSASNSDRLYTMNTKKMKSSLLEDLSKDILKDVELGECKAWSFTNSRGDTIYG
RYYLPPHFDANRKYPMIVNYYGGCSPVSRNFESRYPHHAYAALGYVVYVIEPSGATGFGQEFSARHVNTAGEGVAQDIIE
GTKQFCKEHAFVNDKKIGCIGASYGGFMTQYLQTQTDIFAAAISHAGISDHTSYWGEGYWGYSYSEVSMANSYPWSNPDL
FVKQSPLFNADKIHTPLLFLHGDADVNVPVGESIQMFTALKLLGRETAFVAVTGQDHHIVDYGKRIQWQNTIFAWFAKWL
QDDATWWNAIYKPKAL

Sequences:

>Translated_816_residues
MKKQILLSCALAWAVMAGAETIDITTFRYAGPYVVQAPFQVDSVDVNSKTFVSGRLLDTHLSVDVLQQGTLFTGGVLPGS
DSGYALHMMGFVLENTRYATAKLKIDGLKRYQLYVDGKKQEGTELALEPATHSVVIKYLSEAGKTDSLKVSVDTDQEGSI
SLKQDNKKLYTLADVLHGTRFAGVGLSPDGRYLIANYRTTYVGGRSAGSTRITELASGKVLAERTENMQWMPRSNRYYYT
RTGVDGRQLIVVDPLTGMETVLVNKLPDGYFQFAPTEDYLLFTMTQEGPKERKEIYEVLEPDDRQPGWRNRSYLAKYDLK
TGLLQPLTFGYHNVWAADISNDGRYLLMMTSQSRLTKRPTTLFSLYRLDMQTLQAELLIDKDGFISGARFSPDGTQVLVS
GSPESLGGIGKNVKEGQTPSMTDGQLYLLNIADKRVTPLTKDFNPSVQRAVWNKADGQIYFTAENRDCYSLYRMNPADGK
IQQLEVSEDLVNSFSLAQNAPVMVYYGQSASNSDRLYTMNTKKMKSSLLEDLSKDILKDVELGECKAWSFTNSRGDTIYG
RYYLPPHFDANRKYPMIVNYYGGCSPVSRNFESRYPHHAYAALGYVVYVIEPSGATGFGQEFSARHVNTAGEGVAQDIIE
GTKQFCKEHAFVNDKKIGCIGASYGGFMTQYLQTQTDIFAAAISHAGISDHTSYWGEGYWGYSYSEVSMANSYPWSNPDL
FVKQSPLFNADKIHTPLLFLHGDADVNVPVGESIQMFTALKLLGRETAFVAVTGQDHHIVDYGKRIQWQNTIFAWFAKWL
QDDATWWNAIYKPKAL
>Mature_816_residues
MKKQILLSCALAWAVMAGAETIDITTFRYAGPYVVQAPFQVDSVDVNSKTFVSGRLLDTHLSVDVLQQGTLFTGGVLPGS
DSGYALHMMGFVLENTRYATAKLKIDGLKRYQLYVDGKKQEGTELALEPATHSVVIKYLSEAGKTDSLKVSVDTDQEGSI
SLKQDNKKLYTLADVLHGTRFAGVGLSPDGRYLIANYRTTYVGGRSAGSTRITELASGKVLAERTENMQWMPRSNRYYYT
RTGVDGRQLIVVDPLTGMETVLVNKLPDGYFQFAPTEDYLLFTMTQEGPKERKEIYEVLEPDDRQPGWRNRSYLAKYDLK
TGLLQPLTFGYHNVWAADISNDGRYLLMMTSQSRLTKRPTTLFSLYRLDMQTLQAELLIDKDGFISGARFSPDGTQVLVS
GSPESLGGIGKNVKEGQTPSMTDGQLYLLNIADKRVTPLTKDFNPSVQRAVWNKADGQIYFTAENRDCYSLYRMNPADGK
IQQLEVSEDLVNSFSLAQNAPVMVYYGQSASNSDRLYTMNTKKMKSSLLEDLSKDILKDVELGECKAWSFTNSRGDTIYG
RYYLPPHFDANRKYPMIVNYYGGCSPVSRNFESRYPHHAYAALGYVVYVIEPSGATGFGQEFSARHVNTAGEGVAQDIIE
GTKQFCKEHAFVNDKKIGCIGASYGGFMTQYLQTQTDIFAAAISHAGISDHTSYWGEGYWGYSYSEVSMANSYPWSNPDL
FVKQSPLFNADKIHTPLLFLHGDADVNVPVGESIQMFTALKLLGRETAFVAVTGQDHHIVDYGKRIQWQNTIFAWFAKWL
QDDATWWNAIYKPKAL

Specific function: Unknown

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S9B family [H]

Homologues:

Organism=Homo sapiens, GI18450280, Length=286, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=2e-14,
Organism=Homo sapiens, GI37577089, Length=286, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=2e-14,
Organism=Homo sapiens, GI18765694, Length=272, Percent_Identity=27.9411764705882, Blast_Score=77, Evalue=8e-14,
Organism=Homo sapiens, GI16933540, Length=235, Percent_Identity=25.9574468085106, Blast_Score=69, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17552908, Length=240, Percent_Identity=26.6666666666667, Blast_Score=85, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6324793, Length=253, Percent_Identity=28.4584980237154, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI45550825, Length=212, Percent_Identity=25.4716981132075, Blast_Score=68, Evalue=3e-11,
Organism=Drosophila melanogaster, GI45553511, Length=212, Percent_Identity=25.4716981132075, Blast_Score=68, Evalue=3e-11,
Organism=Drosophila melanogaster, GI45551969, Length=212, Percent_Identity=25.4716981132075, Blast_Score=68, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR011659
- InterPro:   IPR001375 [H]

Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 91297; Mature: 91297

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQILLSCALAWAVMAGAETIDITTFRYAGPYVVQAPFQVDSVDVNSKTFVSGRLLDTH
CCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEECCCEECEEECCCEEEEECEEEEEE
LSVDVLQQGTLFTGGVLPGSDSGYALHMMGFVLENTRYATAKLKIDGLKRYQLYVDGKKQ
CCHHHHCCCCEEECCCCCCCCCCEEEEEEEEHHCCCEEEEEEEEECCCEEEEEEECCCCC
EGTELALEPATHSVVIKYLSEAGKTDSLKVSVDTDQEGSISLKQDNKKLYTLADVLHGTR
CCCEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCEEEEHHHHHCCCE
FAGVGLSPDGRYLIANYRTTYVGGRSAGSTRITELASGKVLAERTENMQWMPRSNRYYYT
EEECCCCCCCCEEEEECEEEEECCCCCCCCCHHHHHCCCEEEHHCCCCEECCCCCCEEEE
RTGVDGRQLIVVDPLTGMETVLVNKLPDGYFQFAPTEDYLLFTMTQEGPKERKEIYEVLE
ECCCCCCEEEEECCCCCCHHHHHHCCCCCCEEECCCCCEEEEEEECCCCHHHHHHHHHHC
PDDRQPGWRNRSYLAKYDLKTGLLQPLTFGYHNVWAADISNDGRYLLMMTSQSRLTKRPT
CCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCEEEEEEECCCCCEEEEEECCCHHHCCCH
TLFSLYRLDMQTLQAELLIDKDGFISGARFSPDGTQVLVSGSPESLGGIGKNVKEGQTPS
HHHHHHHHHHHHHEEEEEECCCCCEECCEECCCCCEEEEECCCHHHCCCCCCCCCCCCCC
MTDGQLYLLNIADKRVTPLTKDFNPSVQRAVWNKADGQIYFTAENRDCYSLYRMNPADGK
CCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCC
IQQLEVSEDLVNSFSLAQNAPVMVYYGQSASNSDRLYTMNTKKMKSSLLEDLSKDILKDV
EEEEECHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCC
ELGECKAWSFTNSRGDTIYGRYYLPPHFDANRKYPMIVNYYGGCSPVSRNFESRYPHHAY
CCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCHHHCCHHHCCCCHHH
AALGYVVYVIEPSGATGFGQEFSARHVNTAGEGVAQDIIEGTKQFCKEHAFVNDKKIGCI
EEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEE
GASYGGFMTQYLQTQTDIFAAAISHAGISDHTSYWGEGYWGYSYSEVSMANSYPWSNPDL
ECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCE
FVKQSPLFNADKIHTPLLFLHGDADVNVPVGESIQMFTALKLLGRETAFVAVTGQDHHIV
EEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCEEE
DYGKRIQWQNTIFAWFAKWLQDDATWWNAIYKPKAL
ECCCEEEECHHHHHHHHHHHHCCCHHHHHCCCCCCC
>Mature Secondary Structure
MKKQILLSCALAWAVMAGAETIDITTFRYAGPYVVQAPFQVDSVDVNSKTFVSGRLLDTH
CCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEECCCEECEEECCCEEEEECEEEEEE
LSVDVLQQGTLFTGGVLPGSDSGYALHMMGFVLENTRYATAKLKIDGLKRYQLYVDGKKQ
CCHHHHCCCCEEECCCCCCCCCCEEEEEEEEHHCCCEEEEEEEEECCCEEEEEEECCCCC
EGTELALEPATHSVVIKYLSEAGKTDSLKVSVDTDQEGSISLKQDNKKLYTLADVLHGTR
CCCEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCEEEEHHHHHCCCE
FAGVGLSPDGRYLIANYRTTYVGGRSAGSTRITELASGKVLAERTENMQWMPRSNRYYYT
EEECCCCCCCCEEEEECEEEEECCCCCCCCCHHHHHCCCEEEHHCCCCEECCCCCCEEEE
RTGVDGRQLIVVDPLTGMETVLVNKLPDGYFQFAPTEDYLLFTMTQEGPKERKEIYEVLE
ECCCCCCEEEEECCCCCCHHHHHHCCCCCCEEECCCCCEEEEEEECCCCHHHHHHHHHHC
PDDRQPGWRNRSYLAKYDLKTGLLQPLTFGYHNVWAADISNDGRYLLMMTSQSRLTKRPT
CCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCEEEEEEECCCCCEEEEEECCCHHHCCCH
TLFSLYRLDMQTLQAELLIDKDGFISGARFSPDGTQVLVSGSPESLGGIGKNVKEGQTPS
HHHHHHHHHHHHHEEEEEECCCCCEECCEECCCCCEEEEECCCHHHCCCCCCCCCCCCCC
MTDGQLYLLNIADKRVTPLTKDFNPSVQRAVWNKADGQIYFTAENRDCYSLYRMNPADGK
CCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCC
IQQLEVSEDLVNSFSLAQNAPVMVYYGQSASNSDRLYTMNTKKMKSSLLEDLSKDILKDV
EEEEECHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCC
ELGECKAWSFTNSRGDTIYGRYYLPPHFDANRKYPMIVNYYGGCSPVSRNFESRYPHHAY
CCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCHHHCCHHHCCCCHHH
AALGYVVYVIEPSGATGFGQEFSARHVNTAGEGVAQDIIEGTKQFCKEHAFVNDKKIGCI
EEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEE
GASYGGFMTQYLQTQTDIFAAAISHAGISDHTSYWGEGYWGYSYSEVSMANSYPWSNPDL
ECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCE
FVKQSPLFNADKIHTPLLFLHGDADVNVPVGESIQMFTALKLLGRETAFVAVTGQDHHIV
EEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCEEE
DYGKRIQWQNTIFAWFAKWLQDDATWWNAIYKPKAL
ECCCEEEECHHHHHHHHHHHHCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 3098560 [H]