| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is luxQ [H]
Identifier: 150006465
GI number: 150006465
Start: 4902356
End: 4904206
Strand: Direct
Name: luxQ [H]
Synonym: BVU_3984
Alternate gene names: 150006465
Gene position: 4902356-4904206 (Clockwise)
Preceding gene: 150006463
Following gene: 150006466
Centisome position: 94.95
GC content: 41.0
Gene sequence:
>1851_bases ATGAAAATTCCGAGTAATATATTGCACGATAAGCAGTATGCAGACAAAATTCTGGAAATTACGGCTGATACTATGTTTTT CGTATATAAAGACGGCACCTGTTTAGACTTCAAGGCTAATACGACGGACTTCTTTATAAAAGAACAAGATATTATAGGGA GAAATATATTCTCTTATTTCCCCGTAGAAACGGCACGGGAGATGTATGCGGAATTCATCAAAGTACGGGCAGGAGACAAA CCTTCCGCACGGAATTACAAATTAATATTGGAAGATGACGTGAAATACTACAAATGTATTATCAGCAAGTATGATGAGGA GCATTTTCTTTTTCAATACAGGGATATCACAGGCCGGAGTGTCGTCAGGCTGAAACTGGAAAAAAAGCAAAAAGATTTGT GCGAAGTAGAAAAAGCCGCAAGAATAGGATTATGGGCATACGATTCGTCCACACGGCTCTTCACTTACTCGGGATACACC CGGATATTCTGTAACGATGAGGAACAGAAACAGATTTCCATAGATGAATACATGAACTATATGCACCTTGATGACAAGGA CCGTTTCAGTCAATGGCTGGAAGAAAACCTGAAGGAGAAAGATGCTTCCAATACCGTAAACTATAGACTCCTTATTGACG GAAAGACCGTCAATATGAGAATAAAAACATACCACAAAGAGGTATATATGCAAAGGACCGTATTGGAAGGATATATACAG AACACATCCGAAATTGTTTGGAAAGCAGAACGCTCCAACCAGCTGAAATCTGCCTTCCTTGCCAATATGAGCCATGAAAT CCGTACGCCGTTGAATGCCATTCTGGGATTCTCACGCATTATAGCCGAAACGGAAAACGCCGAGGAAAGATTGCAGTATT ACGATATTGTAGAAAAAAACAACATGCGCTTGCAGGAACTTATCAACGAGATTTTGGACCTGTCGAAGATTGAATCGGGC ATGATGGAGTTCAACTATGCGCCTGTATCCCTTTATATTTTATGTGAGGATGTAAAAAACACGTATAGTTTCCGGTGTCA ACCCGGAGTGGAGCTTGTTTTCGAAGAGTCCGATCCGTCACTGGTTATCTCGACAGACAGGAACCGCTTGTTTCAGGTTT TCTCCAATCTGATAGGTAATGCTACGAAATTCACCGCCAAAGGTTCTATCAGCTTCGGGTATAAATTGAAGGAAAAAGAG ATTGTTTTTCATGTAGCCGATACCGGAAGCGGTATTTCCGATGACAAGATAGACAAGATATTCGATCGTTTCATCATGGC CAACAACCAAGTGCAAGGCACAGGACTGGGGCTTTCCATCAGCAAAATCATTGTAGAAAAGTTAGGAGGAAAAATAGCTG TACAATCCAAAATGGGAACCGGGACCACATTCACTTTTACATTGCCTTACATTTCGGCAAACGGAGATATGAAATGGGAG GAAAAACTTACACCGGCTTCCATTAAAGACAACAATAGAACTTCCCATCAGGAGATGACCATCCTAGTGGCGGAAGACTA TCAAAGCAATTATGACTTGATAGAGGCTATGCTCGGAAAAATGTACAAACTGGTGCATGCTCATGACGGAATGGAGGCTA TCATATTCTATGAACAATACAAACCCGACTTAATTTTGATGGATATAAAAATGCCTAACATCAATGGTCTGGACGCCACC AAAGCCATCCGGGAAATGTCTGCCAGCGTACCTGTCATCGCTGTAAGCGCATACGCATATGAAAAAGACAAAATAGCTGC CATAGAAAGCGGATGCAATGAGTTTTTAACCAAACCGGTATCTGCCGACTTATTGAAAATGACTATAAACAAGTATCTAA AACAAAAGTAA
Upstream 100 bases:
>100_bases GATATAAACAATATTTTTTTTGTATATTTGCTGTCAGTAACAAATATCACGCATCTAAATTCGCTAAGAGAAACAGTATA TTGAGAATCATACTATTAAT
Downstream 100 bases:
>100_bases TTTATGGGAAGATTAGCCGTATACAAATTTGCCTATTTTTTATCTATCCTGTTCACAATCTTCATTCTGGGACTTTCCAT CTTCGCTTACTTCTCAGGTA
Product: two-component hybrid sensor kinase/response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 616; Mature: 616
Protein sequence:
>616_residues MKIPSNILHDKQYADKILEITADTMFFVYKDGTCLDFKANTTDFFIKEQDIIGRNIFSYFPVETAREMYAEFIKVRAGDK PSARNYKLILEDDVKYYKCIISKYDEEHFLFQYRDITGRSVVRLKLEKKQKDLCEVEKAARIGLWAYDSSTRLFTYSGYT RIFCNDEEQKQISIDEYMNYMHLDDKDRFSQWLEENLKEKDASNTVNYRLLIDGKTVNMRIKTYHKEVYMQRTVLEGYIQ NTSEIVWKAERSNQLKSAFLANMSHEIRTPLNAILGFSRIIAETENAEERLQYYDIVEKNNMRLQELINEILDLSKIESG MMEFNYAPVSLYILCEDVKNTYSFRCQPGVELVFEESDPSLVISTDRNRLFQVFSNLIGNATKFTAKGSISFGYKLKEKE IVFHVADTGSGISDDKIDKIFDRFIMANNQVQGTGLGLSISKIIVEKLGGKIAVQSKMGTGTTFTFTLPYISANGDMKWE EKLTPASIKDNNRTSHQEMTILVAEDYQSNYDLIEAMLGKMYKLVHAHDGMEAIIFYEQYKPDLILMDIKMPNINGLDAT KAIREMSASVPVIAVSAYAYEKDKIAAIESGCNEFLTKPVSADLLKMTINKYLKQK
Sequences:
>Translated_616_residues MKIPSNILHDKQYADKILEITADTMFFVYKDGTCLDFKANTTDFFIKEQDIIGRNIFSYFPVETAREMYAEFIKVRAGDK PSARNYKLILEDDVKYYKCIISKYDEEHFLFQYRDITGRSVVRLKLEKKQKDLCEVEKAARIGLWAYDSSTRLFTYSGYT RIFCNDEEQKQISIDEYMNYMHLDDKDRFSQWLEENLKEKDASNTVNYRLLIDGKTVNMRIKTYHKEVYMQRTVLEGYIQ NTSEIVWKAERSNQLKSAFLANMSHEIRTPLNAILGFSRIIAETENAEERLQYYDIVEKNNMRLQELINEILDLSKIESG MMEFNYAPVSLYILCEDVKNTYSFRCQPGVELVFEESDPSLVISTDRNRLFQVFSNLIGNATKFTAKGSISFGYKLKEKE IVFHVADTGSGISDDKIDKIFDRFIMANNQVQGTGLGLSISKIIVEKLGGKIAVQSKMGTGTTFTFTLPYISANGDMKWE EKLTPASIKDNNRTSHQEMTILVAEDYQSNYDLIEAMLGKMYKLVHAHDGMEAIIFYEQYKPDLILMDIKMPNINGLDAT KAIREMSASVPVIAVSAYAYEKDKIAAIESGCNEFLTKPVSADLLKMTINKYLKQK >Mature_616_residues MKIPSNILHDKQYADKILEITADTMFFVYKDGTCLDFKANTTDFFIKEQDIIGRNIFSYFPVETAREMYAEFIKVRAGDK PSARNYKLILEDDVKYYKCIISKYDEEHFLFQYRDITGRSVVRLKLEKKQKDLCEVEKAARIGLWAYDSSTRLFTYSGYT RIFCNDEEQKQISIDEYMNYMHLDDKDRFSQWLEENLKEKDASNTVNYRLLIDGKTVNMRIKTYHKEVYMQRTVLEGYIQ NTSEIVWKAERSNQLKSAFLANMSHEIRTPLNAILGFSRIIAETENAEERLQYYDIVEKNNMRLQELINEILDLSKIESG MMEFNYAPVSLYILCEDVKNTYSFRCQPGVELVFEESDPSLVISTDRNRLFQVFSNLIGNATKFTAKGSISFGYKLKEKE IVFHVADTGSGISDDKIDKIFDRFIMANNQVQGTGLGLSISKIIVEKLGGKIAVQSKMGTGTTFTFTLPYISANGDMKWE EKLTPASIKDNNRTSHQEMTILVAEDYQSNYDLIEAMLGKMYKLVHAHDGMEAIIFYEQYKPDLILMDIKMPNINGLDAT KAIREMSASVPVIAVSAYAYEKDKIAAIESGCNEFLTKPVSADLLKMTINKYLKQK
Specific function: At low cell density, in absence of autoinducer has a kinase activity, and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is transferred to
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=377, Percent_Identity=30.5039787798408, Blast_Score=184, Evalue=2e-47, Organism=Escherichia coli, GI1788713, Length=379, Percent_Identity=30.6068601583113, Blast_Score=171, Evalue=1e-43, Organism=Escherichia coli, GI87081816, Length=373, Percent_Identity=26.5415549597855, Blast_Score=134, Evalue=1e-32, Organism=Escherichia coli, GI1789149, Length=277, Percent_Identity=33.5740072202166, Blast_Score=134, Evalue=2e-32, Organism=Escherichia coli, GI145693157, Length=313, Percent_Identity=29.073482428115, Blast_Score=122, Evalue=9e-29, Organism=Escherichia coli, GI1786600, Length=378, Percent_Identity=26.7195767195767, Blast_Score=109, Evalue=5e-25, Organism=Escherichia coli, GI1788393, Length=242, Percent_Identity=30.5785123966942, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI1790436, Length=218, Percent_Identity=32.5688073394495, Blast_Score=98, Evalue=2e-21, Organism=Escherichia coli, GI1786912, Length=233, Percent_Identity=29.1845493562232, Blast_Score=96, Evalue=9e-21, Organism=Escherichia coli, GI1788549, Length=232, Percent_Identity=30.1724137931034, Blast_Score=87, Evalue=5e-18, Organism=Escherichia coli, GI87082128, Length=238, Percent_Identity=26.0504201680672, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1790861, Length=210, Percent_Identity=25.2380952380952, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1786783, Length=247, Percent_Identity=25.5060728744939, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1790551, Length=208, Percent_Identity=25.4807692307692, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1786911, Length=116, Percent_Identity=31.0344827586207, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1790437, Length=120, Percent_Identity=29.1666666666667, Blast_Score=65, Evalue=9e-12, Organism=Escherichia coli, GI1788550, Length=88, Percent_Identity=31.8181818181818, Blast_Score=64, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322000, Length=171, Percent_Identity=30.9941520467836, Blast_Score=76, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6322044, Length=152, Percent_Identity=29.6052631578947, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR015387 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 - ProDom: PD142495 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF09308 LuxQ-periplasm; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 71052; Mature: 71052
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIPSNILHDKQYADKILEITADTMFFVYKDGTCLDFKANTTDFFIKEQDIIGRNIFSYF CCCCCHHHCCHHHHHHHHHEEECEEEEEEECCEEEEEECCCCEEEEECCHHHCCHHHHHC PVETAREMYAEFIKVRAGDKPSARNYKLILEDDVKYYKCIISKYDEEHFLFQYRDITGRS CHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCE VVRLKLEKKQKDLCEVEKAARIGLWAYDSSTRLFTYSGYTRIFCNDEEQKQISIDEYMNY EEEEEEHHHHHHHHHHHHHHHEEEEEECCCCEEEEECCEEEEEECCCCHHEEEHHHHHHH MHLDDKDRFSQWLEENLKEKDASNTVNYRLLIDGKTVNMRIKTYHKEVYMQRTVLEGYIQ HCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCEEEEEEEHHHHHHHHHHHHHHHHHC NTSEIVWKAERSNQLKSAFLANMSHEIRTPLNAILGFSRIIAETENAEERLQYYDIVEKN CCHHEEEECHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC NMRLQELINEILDLSKIESGMMEFNYAPVSLYILCEDVKNTYSFRCQPGVELVFEESDPS CCHHHHHHHHHHHHHHHHCCHHEECCCCEEEEEEEECCCCCEEEEECCCCEEEEECCCCC LVISTDRNRLFQVFSNLIGNATKFTAKGSISFGYKLKEKEIVFHVADTGSGISDDKIDKI EEEECCHHHHHHHHHHHHCCCEEEEECCCEEECEEEECCEEEEEEECCCCCCCHHHHHHH FDRFIMANNQVQGTGLGLSISKIIVEKLGGKIAVQSKMGTGTTFTFTLPYISANGDMKWE HHHHHHCCCEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEEEECCCCCCHH EKLTPASIKDNNRTSHQEMTILVAEDYQSNYDLIEAMLGKMYKLVHAHDGMEAIIFYEQY HCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECC KPDLILMDIKMPNINGLDATKAIREMSASVPVIAVSAYAYEKDKIAAIESGCNEFLTKPV CCCEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHCHHHHHCCCC SADLLKMTINKYLKQK CHHHHHHHHHHHHCCC >Mature Secondary Structure MKIPSNILHDKQYADKILEITADTMFFVYKDGTCLDFKANTTDFFIKEQDIIGRNIFSYF CCCCCHHHCCHHHHHHHHHEEECEEEEEEECCEEEEEECCCCEEEEECCHHHCCHHHHHC PVETAREMYAEFIKVRAGDKPSARNYKLILEDDVKYYKCIISKYDEEHFLFQYRDITGRS CHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCE VVRLKLEKKQKDLCEVEKAARIGLWAYDSSTRLFTYSGYTRIFCNDEEQKQISIDEYMNY EEEEEEHHHHHHHHHHHHHHHEEEEEECCCCEEEEECCEEEEEECCCCHHEEEHHHHHHH MHLDDKDRFSQWLEENLKEKDASNTVNYRLLIDGKTVNMRIKTYHKEVYMQRTVLEGYIQ HCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCEEEEEEEHHHHHHHHHHHHHHHHHC NTSEIVWKAERSNQLKSAFLANMSHEIRTPLNAILGFSRIIAETENAEERLQYYDIVEKN CCHHEEEECHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC NMRLQELINEILDLSKIESGMMEFNYAPVSLYILCEDVKNTYSFRCQPGVELVFEESDPS CCHHHHHHHHHHHHHHHHCCHHEECCCCEEEEEEEECCCCCEEEEECCCCEEEEECCCCC LVISTDRNRLFQVFSNLIGNATKFTAKGSISFGYKLKEKEIVFHVADTGSGISDDKIDKI EEEECCHHHHHHHHHHHHCCCEEEEECCCEEECEEEECCEEEEEEECCCCCCCHHHHHHH FDRFIMANNQVQGTGLGLSISKIIVEKLGGKIAVQSKMGTGTTFTFTLPYISANGDMKWE HHHHHHCCCEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEEEECCCCCCHH EKLTPASIKDNNRTSHQEMTILVAEDYQSNYDLIEAMLGKMYKLVHAHDGMEAIIFYEQY HCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECC KPDLILMDIKMPNINGLDATKAIREMSASVPVIAVSAYAYEKDKIAAIESGCNEFLTKPV CCCEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHCHHHHHCCCC SADLLKMTINKYLKQK CHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]