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The map label for this gene is yggS [C]

Identifier: 150006349

GI number: 150006349

Start: 4768891

End: 4769559

Strand: Direct

Name: yggS [C]

Synonym: BVU_3868

Alternate gene names: 150006349

Gene position: 4768891-4769559 (Clockwise)

Preceding gene: 150006348

Following gene: 150006350

Centisome position: 92.36

GC content: 42.9

Gene sequence:

>669_bases
ATGAGCATTCAAGCAAATTTAAAAGAAGTTCTTTCCGAACTGCCTGCGGGTGTCCGCCTGGTAGCCGTATCCAAATTCCA
TCCCAACGAGGCGTTGGAAGAAGCGTATGCTGCCGGCCAGCGTATTTTCGGTGAGAGCCACGTGCAGGAAATGACTCAGA
AATATGAAACCCTGCCCAAAGACATTGAATGGCATTTCATCGGCCACCTGCAAACAAACAAAGTCAAATACATGGCCCCT
TATGTAGCTATGATACATGCCATAGACTCGTATAAATTGTTGGTTGAAGTCAATAAACAAGCTTCCAAAGTCCATCGCGT
CATCCCTTGTTTATTGCAGATACATATCGCCCAAGAGGAAACGAAGTTCGGTTTCTCTTTTGACGAATGCAGGGAAATGC
TGGATACAGGCGGATGGAAGGATTTGAAAAATGTCCGCTTATCAGGAGTGATGGGTATGGCGACCAATGTGGATGACGAC
GAACAAATCAAAAGAGAATTTTGTTCCTTAAATACATTCTTCAAAGAAATAAAGCAGAACTATTTTTCTGATTCAGAATA
CTTTAAAGAAATTTCCATGGGTATGTCACACGATTATCCGCTGGCAGTGGAAGCCGGAAGTACACTAGTCAGGGTAGGAA
GCAAAATCTTTGGAGAACGAAACTATTAA

Upstream 100 bases:

>100_bases
TGTTTACCCATACGAAGCCGAACCGGATGTGAAACCTGAATTTCCGGATGCCGGAAAAACCGAATAAAGCCTGATAAAAA
AATAGAAAGTATAACAGATA

Downstream 100 bases:

>100_bases
AACTACTATTTATATGACTCAATTAAAAACCACTTTTGCCGGGTTGTCACTGCGCAATCCTATAATCATCAGCAGTTCCA
GCCTTACAAACAGCGCTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSIQANLKEVLSELPAGVRLVAVSKFHPNEALEEAYAAGQRIFGESHVQEMTQKYETLPKDIEWHFIGHLQTNKVKYMAP
YVAMIHAIDSYKLLVEVNKQASKVHRVIPCLLQIHIAQEETKFGFSFDECREMLDTGGWKDLKNVRLSGVMGMATNVDDD
EQIKREFCSLNTFFKEIKQNYFSDSEYFKEISMGMSHDYPLAVEAGSTLVRVGSKIFGERNY

Sequences:

>Translated_222_residues
MSIQANLKEVLSELPAGVRLVAVSKFHPNEALEEAYAAGQRIFGESHVQEMTQKYETLPKDIEWHFIGHLQTNKVKYMAP
YVAMIHAIDSYKLLVEVNKQASKVHRVIPCLLQIHIAQEETKFGFSFDECREMLDTGGWKDLKNVRLSGVMGMATNVDDD
EQIKREFCSLNTFFKEIKQNYFSDSEYFKEISMGMSHDYPLAVEAGSTLVRVGSKIFGERNY
>Mature_221_residues
SIQANLKEVLSELPAGVRLVAVSKFHPNEALEEAYAAGQRIFGESHVQEMTQKYETLPKDIEWHFIGHLQTNKVKYMAPY
VAMIHAIDSYKLLVEVNKQASKVHRVIPCLLQIHIAQEETKFGFSFDECREMLDTGGWKDLKNVRLSGVMGMATNVDDDE
QIKREFCSLNTFFKEIKQNYFSDSEYFKEISMGMSHDYPLAVEAGSTLVRVGSKIFGERNY

Specific function: Unknown

COG id: COG0325

COG function: function code R; Predicted enzyme with a TIM-barrel fold

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0001 family [H]

Homologues:

Organism=Homo sapiens, GI6005842, Length=223, Percent_Identity=39.9103139013453, Blast_Score=118, Evalue=4e-27,
Organism=Escherichia coli, GI1789321, Length=215, Percent_Identity=34.8837209302326, Blast_Score=120, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI17533025, Length=223, Percent_Identity=32.2869955156951, Blast_Score=100, Evalue=6e-22,
Organism=Saccharomyces cerevisiae, GI6319435, Length=227, Percent_Identity=34.8017621145374, Blast_Score=117, Evalue=1e-27,
Organism=Drosophila melanogaster, GI45550861, Length=233, Percent_Identity=37.7682403433476, Blast_Score=119, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608
- InterPro:   IPR011078 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: NA

Molecular weight: Translated: 25397; Mature: 25266

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQANLKEVLSELPAGVRLVAVSKFHPNEALEEAYAAGQRIFGESHVQEMTQKYETLPK
CCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC
DIEWHFIGHLQTNKVKYMAPYVAMIHAIDSYKLLVEVNKQASKVHRVIPCLLQIHIAQEE
CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHH
TKFGFSFDECREMLDTGGWKDLKNVRLSGVMGMATNVDDDEQIKREFCSLNTFFKEIKQN
HCCCCCHHHHHHHHHCCCCHHHHHHHHHHHECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
YFSDSEYFKEISMGMSHDYPLAVEAGSTLVRVGSKIFGERNY
HCCCHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SIQANLKEVLSELPAGVRLVAVSKFHPNEALEEAYAAGQRIFGESHVQEMTQKYETLPK
CCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC
DIEWHFIGHLQTNKVKYMAPYVAMIHAIDSYKLLVEVNKQASKVHRVIPCLLQIHIAQEE
CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHH
TKFGFSFDECREMLDTGGWKDLKNVRLSGVMGMATNVDDDEQIKREFCSLNTFFKEIKQN
HCCCCCHHHHHHHHHCCCCHHHHHHHHHHHECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
YFSDSEYFKEISMGMSHDYPLAVEAGSTLVRVGSKIFGERNY
HCCCHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]