| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150006347
Identifier: 150006347
GI number: 150006347
Start: 4767044
End: 4768279
Strand: Direct
Name: 150006347
Synonym: BVU_3866
Alternate gene names: NA
Gene position: 4767044-4768279 (Clockwise)
Preceding gene: 150006344
Following gene: 150006348
Centisome position: 92.33
GC content: 46.2
Gene sequence:
>1236_bases ATGAATCTATACCTGATAACCTTCCAGTCCTCCTTGAACAGAATTGAATCTGTATATGATTGCCATAAAGATTTATTTGT GGAAATCGAGAAGTTTTTCACGCTTCATCTGGTACCATATACAGAGGCTGCAAGTATTCCGGCAGATGCCTACCGGATGG CTTTCATCGCTTCGGGCGGGGTAGAAAAAATGGTCACCCAACACTTCGAACTACTTCCCTATCCTATCCATCTGCTGACC GACGGACAACAGAACTCACTGGCTGCTTCCCTGGAAATAGCTACATGGATACGCAGCAAAGGAATGAAAGTACATATTAT TCATGGCACTATCCCCAATATGGTGAAACAACTGATAGATCATCACAAGGCTTTCGCCGCCCAGCGCGAGGTAAGAGGAA AACGAATAGGAGTTGTTGGATATTCTTCTCCGTGGCTGGTGGCCAGCAATGTAGATTACCTGCTTGCCAAACGCCGCTGG GGAATAGAGTTCATTGATATCCCCATGGAGGAAGTGTATTGTCTGTTTTATCAGATAAAGGATGATGATATAGGATATGA GGCGTCCGTATTTGCCAACCGTGCCATTGCCTGCCGGGAAGGAACTCCGGAAGATTTGCTGAAAGCCATGCGTCTTTATC AGGCCGTGAAAATAATCTGCGAAAAGAAAAAGCTGGATGCGGTAACCCTCTCCTGCTTCTCGTTGATTGAGAAATTAGGA ACTACCGGATGTCTGGCACTTGCCCTGCTGAATGATGAAGGCATCCCGGCCGGATGTGAAGGAGACTTGCAATCCATCTT TACTCTGCTCATCGCCAAGACACTGACCGGCCAGGCAGGATTCATGGCGAATCCGGCATTCATCAACGATGACCAGAACG AAATAGTGATGGCTCACTGTACGATTGCCACCAAAATGGTGGATCAGTTTATCATCCGGAATCATTTTGAAACGGAGACC GGGATAGCCATACAGGGTATTCTGCATCCGGGAGGCATCACGATGATAAAATGCGCGGGAGAGTGTCTGGACGAGTATTT CGTTTCCACAGGCCAACTGATAGAAAATACCAACTACATCAATGCCTGCCGCACCCAGGCAAGAATCAAACTGGACAAAC CCGTAGACTATTTTATGCGTAATCCTTTGGGTAACCATCACATCATATTAATGGGCGATCATGAAAAAGTGATTCACGAA TTCATGCAATTGAACAGCTGCAAACTAGTGGAATAA
Upstream 100 bases:
>100_bases TAATTAAGAATTTAAATCTTTGTTATCTTAATGCGCATTTTTTAGGGTTATTAAAAAAAAACATGTAAGTTTGTTCCAGT AAAACAAAGCAAAATATCAA
Downstream 100 bases:
>100_bases GGAAAGCATGAAGAAATTAAGTAAAATGGGAGACGAAGATTAAATAAATTGTATCTTTGTATCCAATTTAATATTCAATA AAACAATAAACTTTTATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MNLYLITFQSSLNRIESVYDCHKDLFVEIEKFFTLHLVPYTEAASIPADAYRMAFIASGGVEKMVTQHFELLPYPIHLLT DGQQNSLAASLEIATWIRSKGMKVHIIHGTIPNMVKQLIDHHKAFAAQREVRGKRIGVVGYSSPWLVASNVDYLLAKRRW GIEFIDIPMEEVYCLFYQIKDDDIGYEASVFANRAIACREGTPEDLLKAMRLYQAVKIICEKKKLDAVTLSCFSLIEKLG TTGCLALALLNDEGIPAGCEGDLQSIFTLLIAKTLTGQAGFMANPAFINDDQNEIVMAHCTIATKMVDQFIIRNHFETET GIAIQGILHPGGITMIKCAGECLDEYFVSTGQLIENTNYINACRTQARIKLDKPVDYFMRNPLGNHHIILMGDHEKVIHE FMQLNSCKLVE
Sequences:
>Translated_411_residues MNLYLITFQSSLNRIESVYDCHKDLFVEIEKFFTLHLVPYTEAASIPADAYRMAFIASGGVEKMVTQHFELLPYPIHLLT DGQQNSLAASLEIATWIRSKGMKVHIIHGTIPNMVKQLIDHHKAFAAQREVRGKRIGVVGYSSPWLVASNVDYLLAKRRW GIEFIDIPMEEVYCLFYQIKDDDIGYEASVFANRAIACREGTPEDLLKAMRLYQAVKIICEKKKLDAVTLSCFSLIEKLG TTGCLALALLNDEGIPAGCEGDLQSIFTLLIAKTLTGQAGFMANPAFINDDQNEIVMAHCTIATKMVDQFIIRNHFETET GIAIQGILHPGGITMIKCAGECLDEYFVSTGQLIENTNYINACRTQARIKLDKPVDYFMRNPLGNHHIILMGDHEKVIHE FMQLNSCKLVE >Mature_411_residues MNLYLITFQSSLNRIESVYDCHKDLFVEIEKFFTLHLVPYTEAASIPADAYRMAFIASGGVEKMVTQHFELLPYPIHLLT DGQQNSLAASLEIATWIRSKGMKVHIIHGTIPNMVKQLIDHHKAFAAQREVRGKRIGVVGYSSPWLVASNVDYLLAKRRW GIEFIDIPMEEVYCLFYQIKDDDIGYEASVFANRAIACREGTPEDLLKAMRLYQAVKIICEKKKLDAVTLSCFSLIEKLG TTGCLALALLNDEGIPAGCEGDLQSIFTLLIAKTLTGQAGFMANPAFINDDQNEIVMAHCTIATKMVDQFIIRNHFETET GIAIQGILHPGGITMIKCAGECLDEYFVSTGQLIENTNYINACRTQARIKLDKPVDYFMRNPLGNHHIILMGDHEKVIHE FMQLNSCKLVE
Specific function: Unknown
COG id: COG2407
COG function: function code G; L-fucose isomerase and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46187; Mature: 46187
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLYLITFQSSLNRIESVYDCHKDLFVEIEKFFTLHLVPYTEAASIPADAYRMAFIASGG CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHEEEEECCC VEKMVTQHFELLPYPIHLLTDGQQNSLAASLEIATWIRSKGMKVHIIHGTIPNMVKQLID HHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH HHKAFAAQREVRGKRIGVVGYSSPWLVASNVDYLLAKRRWGIEFIDIPMEEVYCLFYQIK HHHHHHHHHHHCCCEEEEEECCCCEEEECCCHHHHHHHHCCCEEEECCHHHEEEEEEEEE DDDIGYEASVFANRAIACREGTPEDLLKAMRLYQAVKIICEKKKLDAVTLSCFSLIEKLG CCCCCCCHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC TTGCLALALLNDEGIPAGCEGDLQSIFTLLIAKTLTGQAGFMANPAFINDDQNEIVMAHC CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCEECCCCCCEEEEEH TIATKMVDQFIIRNHFETETGIAIQGILHPGGITMIKCAGECLDEYFVSTGQLIENTNYI HHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHCCCHHHCCCCHH NACRTQARIKLDKPVDYFMRNPLGNHHIILMGDHEKVIHEFMQLNSCKLVE HHHCCCCEEEECCCHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNLYLITFQSSLNRIESVYDCHKDLFVEIEKFFTLHLVPYTEAASIPADAYRMAFIASGG CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHEEEEECCC VEKMVTQHFELLPYPIHLLTDGQQNSLAASLEIATWIRSKGMKVHIIHGTIPNMVKQLID HHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH HHKAFAAQREVRGKRIGVVGYSSPWLVASNVDYLLAKRRWGIEFIDIPMEEVYCLFYQIK HHHHHHHHHHHCCCEEEEEECCCCEEEECCCHHHHHHHHCCCEEEECCHHHEEEEEEEEE DDDIGYEASVFANRAIACREGTPEDLLKAMRLYQAVKIICEKKKLDAVTLSCFSLIEKLG CCCCCCCHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC TTGCLALALLNDEGIPAGCEGDLQSIFTLLIAKTLTGQAGFMANPAFINDDQNEIVMAHC CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCEECCCCCCEEEEEH TIATKMVDQFIIRNHFETETGIAIQGILHPGGITMIKCAGECLDEYFVSTGQLIENTNYI HHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHCCCHHHCCCCHH NACRTQARIKLDKPVDYFMRNPLGNHHIILMGDHEKVIHEFMQLNSCKLVE HHHCCCCEEEECCCHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA