Click here to switch to the map view.

The map label for this gene is ybjE [H]

Identifier: 150006344

GI number: 150006344

Start: 4763463

End: 4764083

Strand: Direct

Name: ybjE [H]

Synonym: BVU_3863

Alternate gene names: 150006344

Gene position: 4763463-4764083 (Clockwise)

Preceding gene: 150006343

Following gene: 150006347

Centisome position: 92.26

GC content: 50.72

Gene sequence:

>621_bases
GTGAAAAGTAGTCTTGTAACTCTAGCCTTTTTCTTGTTTGGCTGCGTAGCCGGAGTCAGCTATGCGGTGGACTTCGACGT
ACACCAAACCTCTGTATATGTACTATATGTACTGATGCTGTTACTCGGCATTAATCTTGGAAGCAACCGCAACCTCAGGC
AGTTTGTCTTATCCCTCAATTTCAGAACACTGCTTGTACCCCTTGCCACCGTAAGCGGCACTCTGCTGTTTTCCGCCATC
GGAGGCTTTCTCTTGAGCCGCTGGAGTATTTTCGACTGCATGGCTGTCGGAAGCGGATTCTCCTATTATTCCGTTTCCTC
CATCCTTATCACGCAGATCAAATCCCCCTCCATCGGTGTGCAGCTTGCTACCGAATTGGGGACCATCGCACTACTATCCA
ATATTTTCCGGGAAATGACCGCCTTGATAGGAGCTCCCCTTTTCCGCAAATATTTCGGTTATCTGGCGCCTATCTCGGCG
GCGGGCATCGGTTCTTCCGACATTTCCCTGGCAGCCATCGCACGCTGCTCCGGACCGGAAGCCGTACCCGTGGCCATCGT
CCACGGCATACTGATAAACATAAGCATGCCTTTCTTCGTTTCTTTCTTCTGCAAACTGTGA

Upstream 100 bases:

>100_bases
TGCGGCCAGGCAGCCGTCATCTCCTCATTAAGCATATTGGGCAGCATGATGGCCTCCCTTGCAGTATACCACATCTTTTT
CAAAGGAAAGGGGGCAAGCG

Downstream 100 bases:

>100_bases
ACTGAAGGAAGTGACATACTATACGTAACTTTACATTCTCTCTATAAAGAACCGGCCCTGTCACGAATTCGCAGCAGGGT
TGGTTCTAACACATCCGCCC

Product: putative surface protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MKSSLVTLAFFLFGCVAGVSYAVDFDVHQTSVYVLYVLMLLLGINLGSNRNLRQFVLSLNFRTLLVPLATVSGTLLFSAI
GGFLLSRWSIFDCMAVGSGFSYYSVSSILITQIKSPSIGVQLATELGTIALLSNIFREMTALIGAPLFRKYFGYLAPISA
AGIGSSDISLAAIARCSGPEAVPVAIVHGILINISMPFFVSFFCKL

Sequences:

>Translated_206_residues
MKSSLVTLAFFLFGCVAGVSYAVDFDVHQTSVYVLYVLMLLLGINLGSNRNLRQFVLSLNFRTLLVPLATVSGTLLFSAI
GGFLLSRWSIFDCMAVGSGFSYYSVSSILITQIKSPSIGVQLATELGTIALLSNIFREMTALIGAPLFRKYFGYLAPISA
AGIGSSDISLAAIARCSGPEAVPVAIVHGILINISMPFFVSFFCKL
>Mature_206_residues
MKSSLVTLAFFLFGCVAGVSYAVDFDVHQTSVYVLYVLMLLLGINLGSNRNLRQFVLSLNFRTLLVPLATVSGTLLFSAI
GGFLLSRWSIFDCMAVGSGFSYYSVSSILITQIKSPSIGVQLATELGTIALLSNIFREMTALIGAPLFRKYFGYLAPISA
AGIGSSDISLAAIARCSGPEAVPVAIVHGILINISMPFFVSFFCKL

Specific function: Unknown

COG id: COG2431

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1452 [H]

Homologues:

Organism=Escherichia coli, GI87081795, Length=177, Percent_Identity=32.7683615819209, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005642
- ProDom:   PD022789 [H]

Pfam domain/function: PF03956 DUF340 [H]

EC number: NA

Molecular weight: Translated: 22074; Mature: 22074

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSLVTLAFFLFGCVAGVSYAVDFDVHQTSVYVLYVLMLLLGINLGSNRNLRQFVLSLN
CCCHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC
FRTLLVPLATVSGTLLFSAIGGFLLSRWSIFDCMAVGSGFSYYSVSSILITQIKSPSIGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCE
QLATELGTIALLSNIFREMTALIGAPLFRKYFGYLAPISAAGIGSSDISLAAIARCSGPE
EHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHCCCCC
AVPVAIVHGILINISMPFFVSFFCKL
CHHHHHHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure
MKSSLVTLAFFLFGCVAGVSYAVDFDVHQTSVYVLYVLMLLLGINLGSNRNLRQFVLSLN
CCCHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC
FRTLLVPLATVSGTLLFSAIGGFLLSRWSIFDCMAVGSGFSYYSVSSILITQIKSPSIGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCE
QLATELGTIALLSNIFREMTALIGAPLFRKYFGYLAPISAAGIGSSDISLAAIARCSGPE
EHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHCCCCC
AVPVAIVHGILINISMPFFVSFFCKL
CHHHHHHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]