| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150006330
Identifier: 150006330
GI number: 150006330
Start: 4750038
End: 4750673
Strand: Reverse
Name: 150006330
Synonym: BVU_3846
Alternate gene names: NA
Gene position: 4750673-4750038 (Counterclockwise)
Preceding gene: 150006339
Following gene: 150006329
Centisome position: 92.01
GC content: 39.47
Gene sequence:
>636_bases ATGAAAGTTTTGTTCTTCGCTCTGAAGAGCAGATTGTTGAAAAATGGTGAAGCACCTATTATTCTTCGTGTGACAATTGA CGGGCAAAGTGAAGATGCCCGTATCCAAAGAAGTGTTCCTCTAAAGATGTGGAATAATGTTAAGGGATGCAGCAAAGGTA AAGACCGGGCGTCGGTGGAACTGAACTGCTATATTGAGTCGCTGACAGTCCGTTTATACCAGATTCACAAGGAACTTTTG TGTCAGGAGGCTTTGGTAATTCCTAAACATCTTTTGGTGAAGCTGTTCTCTAAAGAGGAACGTCGTATTGTTTTGGGTAC GATGAAGAAGTGCATGGATGACTGGACGGCATTAATCGGCAAGGAATATCAGAAATCCACTCTTTCCCGTTATGGGAACT GCTATGAATTGCTGGAGATTGTAATCCACGAATTCTACAGGAAAGAGTATATTTCCTTCAACGAGTTGAAGGGTGAGTTT ATTGATGCTTTTGAAATGCACCTGCGGATAGTGAGAAAATTGTCTCAGAATACGCTGACCAAATATATGAGCTGCTTCAG AAAAATAATGTATCAAGATGAATTATTGTTGATGTGGAAATATATAAAAAATCATGCAGTCAATGTGCTAATTTAA
Upstream 100 bases:
>100_bases AGATATTTCTCTGAATTTCCTTATTTTATAAGGAAGTGCCTTGCTCCATATTTATTGCGTTTGTAACGCTAAAAACAGAA TAGGATGAAACTAAGGTGCA
Downstream 100 bases:
>100_bases AATAGCTTCTTCTTTTGTAAGCCTGAAACCGTACTTATTGCTTGTTCCCCTTGTATTTTTTTAGTGGATCGGTTATCGCT ATATCGTACTTACATTCAAT
Product: transposase
Products: NA
Alternate protein names: Site-Specific Recombinase; Integrase Family Protein; Tyrosine Type Site-Specific Recombinase; Phage Integrase Family Protein; Integrase; Site-Specific Recombinase Phage Integrase Family; Bacteriophage Integrase
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MKVLFFALKSRLLKNGEAPIILRVTIDGQSEDARIQRSVPLKMWNNVKGCSKGKDRASVELNCYIESLTVRLYQIHKELL CQEALVIPKHLLVKLFSKEERRIVLGTMKKCMDDWTALIGKEYQKSTLSRYGNCYELLEIVIHEFYRKEYISFNELKGEF IDAFEMHLRIVRKLSQNTLTKYMSCFRKIMYQDELLLMWKYIKNHAVNVLI
Sequences:
>Translated_211_residues MKVLFFALKSRLLKNGEAPIILRVTIDGQSEDARIQRSVPLKMWNNVKGCSKGKDRASVELNCYIESLTVRLYQIHKELL CQEALVIPKHLLVKLFSKEERRIVLGTMKKCMDDWTALIGKEYQKSTLSRYGNCYELLEIVIHEFYRKEYISFNELKGEF IDAFEMHLRIVRKLSQNTLTKYMSCFRKIMYQDELLLMWKYIKNHAVNVLI >Mature_211_residues MKVLFFALKSRLLKNGEAPIILRVTIDGQSEDARIQRSVPLKMWNNVKGCSKGKDRASVELNCYIESLTVRLYQIHKELL CQEALVIPKHLLVKLFSKEERRIVLGTMKKCMDDWTALIGKEYQKSTLSRYGNCYELLEIVIHEFYRKEYISFNELKGEF IDAFEMHLRIVRKLSQNTLTKYMSCFRKIMYQDELLLMWKYIKNHAVNVLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24965; Mature: 24965
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLFFALKSRLLKNGEAPIILRVTIDGQSEDARIQRSVPLKMWNNVKGCSKGKDRASVE CHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHCCCHHHHCCCCCCCCCCCCCEEE LNCYIESLTVRLYQIHKELLCQEALVIPKHLLVKLFSKEERRIVLGTMKKCMDDWTALIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC KEYQKSTLSRYGNCYELLEIVIHEFYRKEYISFNELKGEFIDAFEMHLRIVRKLSQNTLT CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KYMSCFRKIMYQDELLLMWKYIKNHAVNVLI HHHHHHHHHHHHHHHHHHHHHHHHHCCEECC >Mature Secondary Structure MKVLFFALKSRLLKNGEAPIILRVTIDGQSEDARIQRSVPLKMWNNVKGCSKGKDRASVE CHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHCCCHHHHCCCCCCCCCCCCCEEE LNCYIESLTVRLYQIHKELLCQEALVIPKHLLVKLFSKEERRIVLGTMKKCMDDWTALIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC KEYQKSTLSRYGNCYELLEIVIHEFYRKEYISFNELKGEFIDAFEMHLRIVRKLSQNTLT CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KYMSCFRKIMYQDELLLMWKYIKNHAVNVLI HHHHHHHHHHHHHHHHHHHHHHHHHCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA