Click here to switch to the map view.

The map label for this gene is hslR [C]

Identifier: 150006314

GI number: 150006314

Start: 4722777

End: 4723205

Strand: Direct

Name: hslR [C]

Synonym: BVU_3825

Alternate gene names: 150006314

Gene position: 4722777-4723205 (Clockwise)

Preceding gene: 150006313

Following gene: 150006320

Centisome position: 91.47

GC content: 45.45

Gene sequence:

>429_bases
ATGGCTGAAGCAAGAATTGATAAATGGCTGTGGGCCTCACGTATATTCAAGACCCGTACTATCGCTGCCGAAGCATGCAA
GAAAGGACGGGTTTCCATCAACGGTACTCAGGTGAAGCCGTCGAGAATGATAAAGCCGGGAGAAGTGATACAGGTAAAGA
AACCGCCTGTCACGTACTCATTTAAAGTTTTACAGGCAATAGAGAAACGTATAGGTGCCAAATTGGTTCCTGAAATTCTG
GAGAATGTAACGACTCCGGAGCAATATGAATTACTGGAAATGAGCAGAATCAGCGGTTTTGTTGATCGCGCCCGCGGAAC
AGGGCGTCCCACCAAGAAGGACCGTCGCAGCATGGAAGAATTCATTACTCCTGAATATTTCGGTGATGATGACTTCGACT
TTGAATTTGATTTCGAAGAACAAGAATAG

Upstream 100 bases:

>100_bases
TGAAGACCATGGACGAACGTGTAGCAACGGCTTGCGACATAATTAAGAGTTTTTGTCTGGCAGGCATCAGTATAACAATG
AACCAATACAATAAAAAGTA

Downstream 100 bases:

>100_bases
ATAGTGATTAATGGTTAGTGATTGTAGGTGTACGCATCTGCTATTAATCACTAGCCATTAACTACTATCTATCTGTTAAT
CATTTCACTACTACAGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: Ribosome-Associated Heat Shock Protein; Heat Shock Protein Hsp; S4 Domain Protein; S4 Domain-Containing Protein; Ribosome-Associated Heat Shock Protein Hsp; Hsp15 Family Heat Shock Protein; Ribosome-Associated Heat Shock Protein HSP; Ribosome-Associated Heat Shock -Like Protein; Ribosome-Associated Heat Shock S Subunit; Heat Shock Protein Hsd

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MAEARIDKWLWASRIFKTRTIAAEACKKGRVSINGTQVKPSRMIKPGEVIQVKKPPVTYSFKVLQAIEKRIGAKLVPEIL
ENVTTPEQYELLEMSRISGFVDRARGTGRPTKKDRRSMEEFITPEYFGDDDFDFEFDFEEQE

Sequences:

>Translated_142_residues
MAEARIDKWLWASRIFKTRTIAAEACKKGRVSINGTQVKPSRMIKPGEVIQVKKPPVTYSFKVLQAIEKRIGAKLVPEIL
ENVTTPEQYELLEMSRISGFVDRARGTGRPTKKDRRSMEEFITPEYFGDDDFDFEFDFEEQE
>Mature_141_residues
AEARIDKWLWASRIFKTRTIAAEACKKGRVSINGTQVKPSRMIKPGEVIQVKKPPVTYSFKVLQAIEKRIGAKLVPEILE
NVTTPEQYELLEMSRISGFVDRARGTGRPTKKDRRSMEEFITPEYFGDDDFDFEFDFEEQE

Specific function: Involved In The Recycling Of Free 50s Ribosomal Subunits That Still Carry A Nascent Chain. Binds RNA More Specifically Than DNA. Binds With Very High Affinity To The Free 50s Ribosomal Subunit. Does Not Bind It When It Is Part Of The 70s Ribosome. [C]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789803, Length=123, Percent_Identity=31.7073170731707, Blast_Score=60, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16437; Mature: 16306

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEARIDKWLWASRIFKTRTIAAEACKKGRVSINGTQVKPSRMIKPGEVIQVKKPPVTYS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHCCCCCCEEEECCCCCCHH
FKVLQAIEKRIGAKLVPEILENVTTPEQYELLEMSRISGFVDRARGTGRPTKKDRRSMEE
HHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
FITPEYFGDDDFDFEFDFEEQE
HCCCCCCCCCCCCEEECCCCCC
>Mature Secondary Structure 
AEARIDKWLWASRIFKTRTIAAEACKKGRVSINGTQVKPSRMIKPGEVIQVKKPPVTYS
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHCCCCCCEEEECCCCCCHH
FKVLQAIEKRIGAKLVPEILENVTTPEQYELLEMSRISGFVDRARGTGRPTKKDRRSMEE
HHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
FITPEYFGDDDFDFEFDFEEQE
HCCCCCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA