| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150006247
Identifier: 150006247
GI number: 150006247
Start: 4646769
End: 4648271
Strand: Reverse
Name: 150006247
Synonym: BVU_3758
Alternate gene names: NA
Gene position: 4648271-4646769 (Counterclockwise)
Preceding gene: 150006248
Following gene: 150006240
Centisome position: 90.03
GC content: 39.39
Gene sequence:
>1503_bases ATGGTACAGTCGTTAAAAGTAATACTTTGGGGTGAGGAAATTGGTAGATTGGCATGGGATGCCAGACGCAGGTTATCCTA TTTTATGTATAATCCGGCCTTCTTGAAGAAAGGTCTTAATATTTCTCCATTAGCTGCACCAGTTGATGGAGCGAGAGGGC TTATGCCTGTATGGGGAGAAGAGGCCAAGATTTATCAAAAATTACCGGCATTTTTAGCAGATTCATTGCCTGACTCATGG GGTAATCAACTTTTTGAATTATGGCGCCAACAGAATCACTTGTCAAACGCAGATATTACTCCTCTTGACAAACTCTCATT TATAGGAAAGCGTGGAATGGGAGCTTTGGAATTCTTGCCTGAGGTTTCAAGAGAGCGTAAGGCTGAAAAAATAGATATCA AATCATTGGCAAATTTAGCAGAGCGTATATTCTCAGAAAGAGAAAATGCCAGAATCCTGCCTGAAGAGTCGGTAACAATG CAGTCATTACTTACGGTTGGTACTTCAGCCGGTGGTCGTCAACCTAAGGCCATTGTTGCCATTAATCTAAAGAATGGTGA GGTTCGTAGCGGGCAGATTTCCGGATTAGAGGAGTTTGATTACTATCTGGTCAAATTTGGTAATTCGCAATACAGTTCGG CAGAATTGGAGATGTCTTACTATGAACTTGCTACAATGGCAGGGATAAATATGATGCCTTCCAAACTCTATCAGGTGGAC GGAAATAATCATTTTATGACAAAACGCTTTGACCGTAATCATGGAAAAAAGATTCATACACAAACTTTGGCTGCAATTAG CCCCGATGCGGACAGTTACGAACAATTGATTACAGTATGTCGGAAGCTCCATCTGCCGGAAACAGACTGTTATGAGGTAT TCCGCAGGATGGTCTTTAATGTATTGGCAAACAATACAGATGATCACAATAAGAATTTTTCATTCGTTATGAGTGAAGAC GGTACTTGGCGTCTGTCTCCTGCATACGATGTAACTTATATATTTGACAATGGAGGATTCTTGCCTAATGAAGATCATTG CATGTATATTAGGGCAAAACTTAGGAATATAACACGGGAAGATGTTATTCAATTTGCTAAAGATAATGGAATACGTAGGC CTGATGCAATAATACGTGATATAGTAAATGCCATGAAACAATTTCGTACGGTTGCCACTAAATATGGTGTTGCTGAACAG TGGGTAGGACGTGTCGAAAACACTATAGTTGACCGTCTGAAATCATGGAGAGAGTTAGAGGAAATGGCTCCCGAAATATG CGAATTGGTTATAAACGGACATATTATAAAGAATATCCGTATTGAGCAGGCGTACAAGGGAAATTTCCATTTGCTTGCTG AAATAGACGGTCATGAACGTAAGTTTATTATTGGTAAGAATAAAGAAGAGTTTTCACTTATTGAATCAATGGGCATAGCA AACCTGTCATCGAATCAGCTTAAAGATATGGTTGAAAAGTATTTTATTCACTTGAAAGTGTAA
Upstream 100 bases:
>100_bases CTATAGACAATCTTCTTCCGGAATTGCCTGAATCTCCTTACATGGTGCGTAAGGATGATAAAAAGGTACAGCGTGTCAGA CACTCTAAATAGCATAAATT
Downstream 100 bases:
>100_bases TCGCCGACTTCGATAGACAGGTCTTTTTCCATCATGGGATTCAAATGATTAATGGTTTTTGCATTTAAGATATATAATGG AAAGCATTCCAAGCAATATC
Product: capsule biosynthesis enzyme-like protein
Products: NA
Alternate protein names: HipA Domain Protein; Xin-Antitoxin System Toxin Component HipA Family; HipA Protein; Amidophosphoribosyl Transferase; HipA-Like Protein; Hipa Domain Protein; HipA-Like C-Terminal Domain Family; Protein With HipA-Like Domain; Hipa Protein; HipA-Family Phosphatidylinositol 3/4-Kinase; Protein Related Capsule Biosynthesis -Like; Protein Containing HipA-Like C-Terminal Domain; Transcriptional Regulator; HipA-Like N-Terminal Domain Family; HipA Family Protein; Conserved Protein; Capsule Biosynthesis Protein HipA; Capsule Biosynthesis -Like Protein; HipA-Like; Orf_Bo
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MVQSLKVILWGEEIGRLAWDARRRLSYFMYNPAFLKKGLNISPLAAPVDGARGLMPVWGEEAKIYQKLPAFLADSLPDSW GNQLFELWRQQNHLSNADITPLDKLSFIGKRGMGALEFLPEVSRERKAEKIDIKSLANLAERIFSERENARILPEESVTM QSLLTVGTSAGGRQPKAIVAINLKNGEVRSGQISGLEEFDYYLVKFGNSQYSSAELEMSYYELATMAGINMMPSKLYQVD GNNHFMTKRFDRNHGKKIHTQTLAAISPDADSYEQLITVCRKLHLPETDCYEVFRRMVFNVLANNTDDHNKNFSFVMSED GTWRLSPAYDVTYIFDNGGFLPNEDHCMYIRAKLRNITREDVIQFAKDNGIRRPDAIIRDIVNAMKQFRTVATKYGVAEQ WVGRVENTIVDRLKSWRELEEMAPEICELVINGHIIKNIRIEQAYKGNFHLLAEIDGHERKFIIGKNKEEFSLIESMGIA NLSSNQLKDMVEKYFIHLKV
Sequences:
>Translated_500_residues MVQSLKVILWGEEIGRLAWDARRRLSYFMYNPAFLKKGLNISPLAAPVDGARGLMPVWGEEAKIYQKLPAFLADSLPDSW GNQLFELWRQQNHLSNADITPLDKLSFIGKRGMGALEFLPEVSRERKAEKIDIKSLANLAERIFSERENARILPEESVTM QSLLTVGTSAGGRQPKAIVAINLKNGEVRSGQISGLEEFDYYLVKFGNSQYSSAELEMSYYELATMAGINMMPSKLYQVD GNNHFMTKRFDRNHGKKIHTQTLAAISPDADSYEQLITVCRKLHLPETDCYEVFRRMVFNVLANNTDDHNKNFSFVMSED GTWRLSPAYDVTYIFDNGGFLPNEDHCMYIRAKLRNITREDVIQFAKDNGIRRPDAIIRDIVNAMKQFRTVATKYGVAEQ WVGRVENTIVDRLKSWRELEEMAPEICELVINGHIIKNIRIEQAYKGNFHLLAEIDGHERKFIIGKNKEEFSLIESMGIA NLSSNQLKDMVEKYFIHLKV >Mature_500_residues MVQSLKVILWGEEIGRLAWDARRRLSYFMYNPAFLKKGLNISPLAAPVDGARGLMPVWGEEAKIYQKLPAFLADSLPDSW GNQLFELWRQQNHLSNADITPLDKLSFIGKRGMGALEFLPEVSRERKAEKIDIKSLANLAERIFSERENARILPEESVTM QSLLTVGTSAGGRQPKAIVAINLKNGEVRSGQISGLEEFDYYLVKFGNSQYSSAELEMSYYELATMAGINMMPSKLYQVD GNNHFMTKRFDRNHGKKIHTQTLAAISPDADSYEQLITVCRKLHLPETDCYEVFRRMVFNVLANNTDDHNKNFSFVMSED GTWRLSPAYDVTYIFDNGGFLPNEDHCMYIRAKLRNITREDVIQFAKDNGIRRPDAIIRDIVNAMKQFRTVATKYGVAEQ WVGRVENTIVDRLKSWRELEEMAPEICELVINGHIIKNIRIEQAYKGNFHLLAEIDGHERKFIIGKNKEEFSLIESMGIA NLSSNQLKDMVEKYFIHLKV
Specific function: Unknown
COG id: COG3550
COG function: function code R; Uncharacterized protein related to capsule biosynthesis enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57282; Mature: 57282
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQSLKVILWGEEIGRLAWDARRRLSYFMYNPAFLKKGLNISPLAAPVDGARGLMPVWGE CCCCEEEEEECHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC EAKIYQKLPAFLADSLPDSWGNQLFELWRQQNHLSNADITPLDKLSFIGKRGMGALEFLP HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHH EVSRERKAEKIDIKSLANLAERIFSERENARILPEESVTMQSLLTVGTSAGGRQPKAIVA HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCEEEE INLKNGEVRSGQISGLEEFDYYLVKFGNSQYSSAELEMSYYELATMAGINMMPSKLYQVD EEECCCCCCCCCCCCHHHHCEEEEEECCCCCCCHHEEHHHHHHHHHHCCCCCCCHHEEEC GNNHFMTKRFDRNHGKKIHTQTLAAISPDADSYEQLITVCRKLHLPETDCYEVFRRMVFN CCCEEEEECCCCCCCCEEHHHHHHEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH VLANNTDDHNKNFSFVMSEDGTWRLSPAYDVTYIFDNGGFLPNEDHCMYIRAKLRNITRE HHHCCCCCCCCCEEEEECCCCCEEECCCCEEEEEEECCCCCCCCCCEEEEEHHHHHCCHH DVIQFAKDNGIRRPDAIIRDIVNAMKQFRTVATKYGVAEQWVGRVENTIVDRLKSWRELE HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH EMAPEICELVINGHIIKNIRIEQAYKGNFHLLAEIDGHERKFIIGKNKEEFSLIESMGIA HHHHHHHHHHHCCEEEEEEEEEEEECCCEEEEEEECCCCEEEEECCCCHHHHHHHHHCCC NLSSNQLKDMVEKYFIHLKV CCCHHHHHHHHHHHEEEECC >Mature Secondary Structure MVQSLKVILWGEEIGRLAWDARRRLSYFMYNPAFLKKGLNISPLAAPVDGARGLMPVWGE CCCCEEEEEECHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC EAKIYQKLPAFLADSLPDSWGNQLFELWRQQNHLSNADITPLDKLSFIGKRGMGALEFLP HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHH EVSRERKAEKIDIKSLANLAERIFSERENARILPEESVTMQSLLTVGTSAGGRQPKAIVA HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCEEEE INLKNGEVRSGQISGLEEFDYYLVKFGNSQYSSAELEMSYYELATMAGINMMPSKLYQVD EEECCCCCCCCCCCCHHHHCEEEEEECCCCCCCHHEEHHHHHHHHHHCCCCCCCHHEEEC GNNHFMTKRFDRNHGKKIHTQTLAAISPDADSYEQLITVCRKLHLPETDCYEVFRRMVFN CCCEEEEECCCCCCCCEEHHHHHHEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH VLANNTDDHNKNFSFVMSEDGTWRLSPAYDVTYIFDNGGFLPNEDHCMYIRAKLRNITRE HHHCCCCCCCCCEEEEECCCCCEEECCCCEEEEEEECCCCCCCCCCEEEEEHHHHHCCHH DVIQFAKDNGIRRPDAIIRDIVNAMKQFRTVATKYGVAEQWVGRVENTIVDRLKSWRELE HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH EMAPEICELVINGHIIKNIRIEQAYKGNFHLLAEIDGHERKFIIGKNKEEFSLIESMGIA HHHHHHHHHHHCCEEEEEEEEEEEECCCEEEEEEECCCCEEEEECCCCHHHHHHHHHCCC NLSSNQLKDMVEKYFIHLKV CCCHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA