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The map label for this gene is skfB [H]

Identifier: 150006239

GI number: 150006239

Start: 4633147

End: 4634484

Strand: Reverse

Name: skfB [H]

Synonym: BVU_3750

Alternate gene names: 150006239

Gene position: 4634484-4633147 (Counterclockwise)

Preceding gene: 150006240

Following gene: 150006238

Centisome position: 89.76

GC content: 32.96

Gene sequence:

>1338_bases
ATGAACGGAGAATTGGATTACGATGATATACTTCATTTTCCCGAAGAAATAGTTGTAGAAAAAATCAATGATTTCTATCT
GGTTATTGCTGTACAAACAGCAAATTGGATTGTTCTTTATAATTCCAGACAGATAGATTTTCTAAATATGCTACGTTCTG
GAAAGTGCGTTGGCGATGTAATAGAGACGGTGGATAGTGAAGAAGCAATGGGTGATTTAAAGATTGTATTGGCTGCAATT
TTTGCAAGAAAATTTGCAGGAGTTAATGGTGAGGTAACTAAGGAATATCTTGAAGGTTACAAAATGCTTAATATATATAT
TACAAATGCATGTAATCTTAAATGCAAACATTGTTTCATGCTGTCCGGGAAAAAACTGGAAAATGAATTAACATTAGAAG
ATTGGATGAAAGTTCTGACTTCATTCAAAGAGAATGGAGGAGAATTTGTAACTTTCTCTGGTGGTGAACCTCTTATGTTT
AAAAATTTCCCGCAAATAATAAGTCATGCTCATGATTTAGGCTTGAAAAGTACTGTTCTTTCCAATGGATTGTTGTGGTC
AGGTAAATTGATACATGATTTGGCTCTATTTATTGATGAAATTCAGTTTAGCCTTGATGGTGTTGATGAAGAAACAAACT
CCATGGTAAGAGGAAGTGGGCATTTTGAAAAAGTTGTAGATACTATTGTGAAATTTGCCAATGCTGGAGTAAAGACGTCT
GTCGCTACTACATTTACTTATGACAATCTTAATGAGAATACACAGACCCGATACAAAAATCTGGTCGATTTGATAAAAGA
AAAAACATCAGGTAAAGATGTATTCTTCAAACTTAGCAAAAAGCTTCTTCCAGGTAGAGATGTGCATTTTAAAGCTGAAG
AGAACGAAAAATACTCTGCAATAATAAAGGATATAGAAAAGCATGTTGATGAAAATGCAGATTATGAGAACTTCCTTGCT
GGTCATACTGCAAATTTGGTAGCTATAAATTGTGGATTAGGAGGTATATCTGTCAGTTCGGATGGAAATGTTTATTTCTG
TAACAGAATAAACGAAATGGAATCATTCGGAAATGTTACTGAGAAACCAATGTCTTTTTTCATGGAAAAAGGTAAAGAAA
TACATTTGGCTACTTCGGTTGAGAATGTTATCCCTTGTAAAGACTGTGAATTGAGATATATTTGTGACGGTGGATGTAGA
ATTGATGATTTTGATTTTGCAGGTAAAATACAATCTTCAGCTTTGCCATATCATCAGATAAGTTGTAATGATGAAAAAAA
GAATAAGCTGAAGAAAAGAATGATAGATAGCTTTAATTATTTTTATAAGTTTGATTGA

Upstream 100 bases:

>100_bases
ACGCTGTGATGTAAACCAAAACTAATTTTGGCTTACAGAAATATTGATGCCCCAGAAAAAAGTGGGGCATTTTTTTTATA
ATAAATCACTACTGATAATT

Downstream 100 bases:

>100_bases
TGGAATACAGGTTTGTGTGTATATTGAATAATACGACTTCAAACCGAAATATTGACATTGAAGTCTGTATGGAAACAGGT
TCCAGGTCTTTGTCTCCGTT

Product: putative Fe-S oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MNGELDYDDILHFPEEIVVEKINDFYLVIAVQTANWIVLYNSRQIDFLNMLRSGKCVGDVIETVDSEEAMGDLKIVLAAI
FARKFAGVNGEVTKEYLEGYKMLNIYITNACNLKCKHCFMLSGKKLENELTLEDWMKVLTSFKENGGEFVTFSGGEPLMF
KNFPQIISHAHDLGLKSTVLSNGLLWSGKLIHDLALFIDEIQFSLDGVDEETNSMVRGSGHFEKVVDTIVKFANAGVKTS
VATTFTYDNLNENTQTRYKNLVDLIKEKTSGKDVFFKLSKKLLPGRDVHFKAEENEKYSAIIKDIEKHVDENADYENFLA
GHTANLVAINCGLGGISVSSDGNVYFCNRINEMESFGNVTEKPMSFFMEKGKEIHLATSVENVIPCKDCELRYICDGGCR
IDDFDFAGKIQSSALPYHQISCNDEKKNKLKKRMIDSFNYFYKFD

Sequences:

>Translated_445_residues
MNGELDYDDILHFPEEIVVEKINDFYLVIAVQTANWIVLYNSRQIDFLNMLRSGKCVGDVIETVDSEEAMGDLKIVLAAI
FARKFAGVNGEVTKEYLEGYKMLNIYITNACNLKCKHCFMLSGKKLENELTLEDWMKVLTSFKENGGEFVTFSGGEPLMF
KNFPQIISHAHDLGLKSTVLSNGLLWSGKLIHDLALFIDEIQFSLDGVDEETNSMVRGSGHFEKVVDTIVKFANAGVKTS
VATTFTYDNLNENTQTRYKNLVDLIKEKTSGKDVFFKLSKKLLPGRDVHFKAEENEKYSAIIKDIEKHVDENADYENFLA
GHTANLVAINCGLGGISVSSDGNVYFCNRINEMESFGNVTEKPMSFFMEKGKEIHLATSVENVIPCKDCELRYICDGGCR
IDDFDFAGKIQSSALPYHQISCNDEKKNKLKKRMIDSFNYFYKFD
>Mature_445_residues
MNGELDYDDILHFPEEIVVEKINDFYLVIAVQTANWIVLYNSRQIDFLNMLRSGKCVGDVIETVDSEEAMGDLKIVLAAI
FARKFAGVNGEVTKEYLEGYKMLNIYITNACNLKCKHCFMLSGKKLENELTLEDWMKVLTSFKENGGEFVTFSGGEPLMF
KNFPQIISHAHDLGLKSTVLSNGLLWSGKLIHDLALFIDEIQFSLDGVDEETNSMVRGSGHFEKVVDTIVKFANAGVKTS
VATTFTYDNLNENTQTRYKNLVDLIKEKTSGKDVFFKLSKKLLPGRDVHFKAEENEKYSAIIKDIEKHVDENADYENFLA
GHTANLVAINCGLGGISVSSDGNVYFCNRINEMESFGNVTEKPMSFFMEKGKEIHLATSVENVIPCKDCELRYICDGGCR
IDDFDFAGKIQSSALPYHQISCNDEKKNKLKKRMIDSFNYFYKFD

Specific function: Required for production of the bacteriocin skfA [H]

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the moaA/nifB/pqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 50343; Mature: 50343

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGELDYDDILHFPEEIVVEKINDFYLVIAVQTANWIVLYNSRQIDFLNMLRSGKCVGDV
CCCCCCHHHHHHCCHHHHHHHCCCEEEEEEEECCCEEEEECCCCCHHHHHHHCCCHHHHH
IETVDSEEAMGDLKIVLAAIFARKFAGVNGEVTKEYLEGYKMLNIYITNACNLKCKHCFM
HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEEEEEECCCCCEEEEEEE
LSGKKLENELTLEDWMKVLTSFKENGGEFVTFSGGEPLMFKNFPQIISHAHDLGLKSTVL
ECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHH
SNGLLWSGKLIHDLALFIDEIQFSLDGVDEETNSMVRGSGHFEKVVDTIVKFANAGVKTS
HCCCEECCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCHHHHHHHHHHHHCCCCEEE
VATTFTYDNLNENTQTRYKNLVDLIKEKTSGKDVFFKLSKKLLPGRDVHFKAEENEKYSA
EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHH
IIKDIEKHVDENADYENFLAGHTANLVAINCGLGGISVSSDGNVYFCNRINEMESFGNVT
HHHHHHHHCCCCCCHHHHHCCCCCCEEEEEECCCCEEECCCCCEEEECCHHHHHHHCCCH
EKPMSFFMEKGKEIHLATSVENVIPCKDCELRYICDGGCRIDDFDFAGKIQSSALPYHQI
HHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEECCCCEECCCCCCCCHHHCCCCCEEE
SCNDEKKNKLKKRMIDSFNYFYKFD
CCCCHHHHHHHHHHHHHCCCEEECC
>Mature Secondary Structure
MNGELDYDDILHFPEEIVVEKINDFYLVIAVQTANWIVLYNSRQIDFLNMLRSGKCVGDV
CCCCCCHHHHHHCCHHHHHHHCCCEEEEEEEECCCEEEEECCCCCHHHHHHHCCCHHHHH
IETVDSEEAMGDLKIVLAAIFARKFAGVNGEVTKEYLEGYKMLNIYITNACNLKCKHCFM
HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEEEEEECCCCCEEEEEEE
LSGKKLENELTLEDWMKVLTSFKENGGEFVTFSGGEPLMFKNFPQIISHAHDLGLKSTVL
ECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHH
SNGLLWSGKLIHDLALFIDEIQFSLDGVDEETNSMVRGSGHFEKVVDTIVKFANAGVKTS
HCCCEECCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCHHHHHHHHHHHHCCCCEEE
VATTFTYDNLNENTQTRYKNLVDLIKEKTSGKDVFFKLSKKLLPGRDVHFKAEENEKYSA
EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHH
IIKDIEKHVDENADYENFLAGHTANLVAINCGLGGISVSSDGNVYFCNRINEMESFGNVT
HHHHHHHHCCCCCCHHHHHCCCCCCEEEEEECCCCEEECCCCCEEEECCHHHHHHHCCCH
EKPMSFFMEKGKEIHLATSVENVIPCKDCELRYICDGGCRIDDFDFAGKIQSSALPYHQI
HHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEECCCCEECCCCCCCCHHHCCCCCEEE
SCNDEKKNKLKKRMIDSFNYFYKFD
CCCCHHHHHHHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 10568751 [H]