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The map label for this gene is 150006113

Identifier: 150006113

GI number: 150006113

Start: 4488460

End: 4489110

Strand: Reverse

Name: 150006113

Synonym: BVU_3624

Alternate gene names: NA

Gene position: 4489110-4488460 (Counterclockwise)

Preceding gene: 150006114

Following gene: 150006112

Centisome position: 86.94

GC content: 44.85

Gene sequence:

>651_bases
ATGAAACAAATAAAGAAAACGATTACTAAAGCCGAGATAGCAGCAATGCCCAAGGTGCTTTTTCCGGGACGCATCTTCGT
GATTTATACCGAGAGTGAGGCCGAAAAAGCGGTAGCCTATTTGAAAGATCAACGCATAGTGGGAGTGGATACGGAAACAC
GCCCTTCTTTTAAACGCGGTACTACCCATAAGGTAGCTTTGTTGCAAATATCTACGCAAGATACCTGTTTCTTGTTTCGC
CTGAACCGGATAGGTATGCCCGATTCTCTGCAAGAGTTTTTGATGAGTAATACCTTGAAGATAGGTTTGTCTCTGAAAGA
CGATTTTAACTCGTTGCGGAAACGTGAGGATGTGCATCCCGACCGGGGAAACTGGATAGAGTTACAGGACTATGTAGGAC
GATTCGGCATAGCTGACCGGAGTCTGCAAAAAATCTTCGCCAATTTGTTTGGCCAGAAGATTTCAAAAAGCCAGCGTCTT
TCTAATTGGGAGGCGGAGGTGCTCAGCGAGGGACAGAAACTATATGCAGCCACGGATGCGTGGGCTTGTGTGGAAATTTA
CAATTGCCTGACGGAATTGGAACGTACGGGCGGTTATGAGATAACAGAGGAAGAACCAATAGAAACAACAGTAAATACAA
ATGGCTTATAA

Upstream 100 bases:

>100_bases
GACAACGGCTGGTAAACACTATGCGTGCTTTGCATGATGTGAAGTACAGCCCTGCCGATGATGGCGAGGAGGAAGAAATG
GAAGATGAGAATTCATTATT

Downstream 100 bases:

>100_bases
GAAAGTATACCTGAAACCGGGTAAGGAAGAGTCGTTAAAGCGTTTTCATCCGTGGGTATTCTCCGGAGCTATCCAGCGCA
TTGAGGGAGAACCCGAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: 3-5' Exonuclease Domain Protein; 3- 5' Exonuclease Domain Protein; Ribonuclease D; 3 Exoribonuclease Family Protein; Exonuclease

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MKQIKKTITKAEIAAMPKVLFPGRIFVIYTESEAEKAVAYLKDQRIVGVDTETRPSFKRGTTHKVALLQISTQDTCFLFR
LNRIGMPDSLQEFLMSNTLKIGLSLKDDFNSLRKREDVHPDRGNWIELQDYVGRFGIADRSLQKIFANLFGQKISKSQRL
SNWEAEVLSEGQKLYAATDAWACVEIYNCLTELERTGGYEITEEEPIETTVNTNGL

Sequences:

>Translated_216_residues
MKQIKKTITKAEIAAMPKVLFPGRIFVIYTESEAEKAVAYLKDQRIVGVDTETRPSFKRGTTHKVALLQISTQDTCFLFR
LNRIGMPDSLQEFLMSNTLKIGLSLKDDFNSLRKREDVHPDRGNWIELQDYVGRFGIADRSLQKIFANLFGQKISKSQRL
SNWEAEVLSEGQKLYAATDAWACVEIYNCLTELERTGGYEITEEEPIETTVNTNGL
>Mature_216_residues
MKQIKKTITKAEIAAMPKVLFPGRIFVIYTESEAEKAVAYLKDQRIVGVDTETRPSFKRGTTHKVALLQISTQDTCFLFR
LNRIGMPDSLQEFLMSNTLKIGLSLKDDFNSLRKREDVHPDRGNWIELQDYVGRFGIADRSLQKIFANLFGQKISKSQRL
SNWEAEVLSEGQKLYAATDAWACVEIYNCLTELERTGGYEITEEEPIETTVNTNGL

Specific function: Unknown

COG id: COG0749

COG function: function code L; DNA polymerase I - 3'-5' exonuclease and polymerase domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI110735439, Length=204, Percent_Identity=32.843137254902, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24605; Mature: 24605

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIKKTITKAEIAAMPKVLFPGRIFVIYTESEAEKAVAYLKDQRIVGVDTETRPSFKRG
CCHHHHHHHHHHHHHCCCEECCCEEEEEEECCCHHHHHHHHHCCEEEECCCCCCCCCCCC
TTHKVALLQISTQDTCFLFRLNRIGMPDSLQEFLMSNTLKIGLSLKDDFNSLRKREDVHP
CCEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHCCEEEEEEEHHHHHHHHHHHCCCC
DRGNWIELQDYVGRFGIADRSLQKIFANLFGQKISKSQRLSNWEAEVLSEGQKLYAATDA
CCCCEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEECCH
WACVEIYNCLTELERTGGYEITEEEPIETTVNTNGL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKQIKKTITKAEIAAMPKVLFPGRIFVIYTESEAEKAVAYLKDQRIVGVDTETRPSFKRG
CCHHHHHHHHHHHHHCCCEECCCEEEEEEECCCHHHHHHHHHCCEEEECCCCCCCCCCCC
TTHKVALLQISTQDTCFLFRLNRIGMPDSLQEFLMSNTLKIGLSLKDDFNSLRKREDVHP
CCEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHCCEEEEEEEHHHHHHHHHHHCCCC
DRGNWIELQDYVGRFGIADRSLQKIFANLFGQKISKSQRLSNWEAEVLSEGQKLYAATDA
CCCCEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEECCH
WACVEIYNCLTELERTGGYEITEEEPIETTVNTNGL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA