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The map label for this gene is tnpA [H]

Identifier: 150005975

GI number: 150005975

Start: 4325346

End: 4326920

Strand: Reverse

Name: tnpA [H]

Synonym: BVU_3473

Alternate gene names: 150005975

Gene position: 4326920-4325346 (Counterclockwise)

Preceding gene: 150005982

Following gene: 150005974

Centisome position: 83.8

GC content: 46.22

Gene sequence:

>1575_bases
ATGGACAGAACTAAGGACGCATGCAGACACCAATCAAACAACAGAGTCATCATGTGGTACAAAATAAGAGAATTATATTC
AAAAGGATTTAACAAAAGTCAGATTGCGTTCCAGCTTGGTCTGCATAGAAGTACGGTGCGCCGGTACTTGAAAATGGATG
AGGATACATTGACTGCAAAATTGCAGCATCGCAGGCGATATCCCCGCATACTTGACAAATACGAACGTTATGTCTGTGAC
GTTCTTTCCCGGTACAGGTTCCTGTCCGCCTCCCAGATTCATGACTGGATGAAGGAACAGTATCCTGATCTTCCTGTCGT
CTGCGGGAAAACCGTATACAATTTTGTGGAAACTGTACGTCGTAAGTATAATCTGGACAAGGAGGGTCTTTCCAAACGTG
TTTATGAGAAAATGCCGGATACCCCTTACGGGGAATATGCCCAGATGGATTTCGGAGAAAGCCGTATGCCCACATACAGG
GACAACTTTGTCAAAGTTTATTTTTTTGTCATGGTGATGAGCCGTTCCAGGCAGAAGTTCGTGTATTTTTCCTGTACGCC
TTTCACATCAGCCCTAGCCGTATATGCCCATGAACTGGCTTTCGCATATTTCGGAGGGAAGCCAAGAAGGATAATCTATG
ACCAGGACAAAGTCCTGCTGGTCAGAGAAAACCTGGGTGACCTCATATTGACAAGAACATTCCGTGCCTTTGTCAACGAG
CAGCATTTCCAGCCCGTGTTCTGCCGTCCTGCTGATCCGGAAAGCAAGGGAAAAGTGGAAAATGTGGTCAAATATGTCAA
GCGTAACTTTCTTGCCGGACGGGCATTTAACAGCCTGGAAGTCCTTAACACCGAGGTCCTGCAATGGCTGGAAAAAACAG
GAAACGGCAAGATACATGGAACCACACGCCTGGTTCCGGCTGAGGAATTTGAGATTGAACGGAAATATCTGTTGCCATAC
TATGGAGAACCGGTGCCCCCTAAAGACGAGCCGAAAGAGTATCATGTCCGCAAGGACAATACGGTACGGTACCGGACCAA
CTACTACAGTGTGCCCTCCGGCACCTATAAAAATCGGAACACCGTTGTATGGCTTCTTGAGAATAACGGACATATCGAGC
TGTACGACAAAGAGAGCGGTAAACTCATATGCAGGCATGAGTTGTGTCCCGGAAAAGGGAAAAATGTATGTGACAAAAGA
CATCATAAGGACAAGACACGGAGTGTGAATGACTTGCAGGTCCGGATCCGAAAGCGGACGGAAGATGACCCCACCGTTAT
TCTGTGGCTCCGGAATCTGGAAAGGGAAAAGCCGCGTTATTACAGAGACAATATGAAACTGCTGCTTCATGTGATATCCG
AATACGGCAAAGAAACAGTGATAGCAGCCCTGCGGACCTGTCTGGAAAAAAACATATACAACAGTCTTTCCGTGCAGGAA
ATATCCGGCTCAATCCACAGGAGTAAGGACAATATGAACGGGATGACTTTCCAAGCTCCGACATCCATTCCGGAAACAGC
GGACTGTCATCCTGAAAAAACAGATATAAACCAATATAACAAGTTTTTTGAATGA

Upstream 100 bases:

>100_bases
TTGTAATCCGTATCTTTGCCCCATGTCCTTTTAGAAAAAGGAAATATGCCATCATGCCTCCTAAAAATGTCTATATTTGC
GTTTCAATAATATAAATGAT

Downstream 100 bases:

>100_bases
TACAAAGTGAAAAATTGAAAGAACACGCCAAACGTCTGCGGCTTTACAACATTGCAAACCGCATGGACAGCATTCTGCAT
CATGCACAGGAAGAAAAACC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MDRTKDACRHQSNNRVIMWYKIRELYSKGFNKSQIAFQLGLHRSTVRRYLKMDEDTLTAKLQHRRRYPRILDKYERYVCD
VLSRYRFLSASQIHDWMKEQYPDLPVVCGKTVYNFVETVRRKYNLDKEGLSKRVYEKMPDTPYGEYAQMDFGESRMPTYR
DNFVKVYFFVMVMSRSRQKFVYFSCTPFTSALAVYAHELAFAYFGGKPRRIIYDQDKVLLVRENLGDLILTRTFRAFVNE
QHFQPVFCRPADPESKGKVENVVKYVKRNFLAGRAFNSLEVLNTEVLQWLEKTGNGKIHGTTRLVPAEEFEIERKYLLPY
YGEPVPPKDEPKEYHVRKDNTVRYRTNYYSVPSGTYKNRNTVVWLLENNGHIELYDKESGKLICRHELCPGKGKNVCDKR
HHKDKTRSVNDLQVRIRKRTEDDPTVILWLRNLEREKPRYYRDNMKLLLHVISEYGKETVIAALRTCLEKNIYNSLSVQE
ISGSIHRSKDNMNGMTFQAPTSIPETADCHPEKTDINQYNKFFE

Sequences:

>Translated_524_residues
MDRTKDACRHQSNNRVIMWYKIRELYSKGFNKSQIAFQLGLHRSTVRRYLKMDEDTLTAKLQHRRRYPRILDKYERYVCD
VLSRYRFLSASQIHDWMKEQYPDLPVVCGKTVYNFVETVRRKYNLDKEGLSKRVYEKMPDTPYGEYAQMDFGESRMPTYR
DNFVKVYFFVMVMSRSRQKFVYFSCTPFTSALAVYAHELAFAYFGGKPRRIIYDQDKVLLVRENLGDLILTRTFRAFVNE
QHFQPVFCRPADPESKGKVENVVKYVKRNFLAGRAFNSLEVLNTEVLQWLEKTGNGKIHGTTRLVPAEEFEIERKYLLPY
YGEPVPPKDEPKEYHVRKDNTVRYRTNYYSVPSGTYKNRNTVVWLLENNGHIELYDKESGKLICRHELCPGKGKNVCDKR
HHKDKTRSVNDLQVRIRKRTEDDPTVILWLRNLEREKPRYYRDNMKLLLHVISEYGKETVIAALRTCLEKNIYNSLSVQE
ISGSIHRSKDNMNGMTFQAPTSIPETADCHPEKTDINQYNKFFE
>Mature_524_residues
MDRTKDACRHQSNNRVIMWYKIRELYSKGFNKSQIAFQLGLHRSTVRRYLKMDEDTLTAKLQHRRRYPRILDKYERYVCD
VLSRYRFLSASQIHDWMKEQYPDLPVVCGKTVYNFVETVRRKYNLDKEGLSKRVYEKMPDTPYGEYAQMDFGESRMPTYR
DNFVKVYFFVMVMSRSRQKFVYFSCTPFTSALAVYAHELAFAYFGGKPRRIIYDQDKVLLVRENLGDLILTRTFRAFVNE
QHFQPVFCRPADPESKGKVENVVKYVKRNFLAGRAFNSLEVLNTEVLQWLEKTGNGKIHGTTRLVPAEEFEIERKYLLPY
YGEPVPPKDEPKEYHVRKDNTVRYRTNYYSVPSGTYKNRNTVVWLLENNGHIELYDKESGKLICRHELCPGKGKNVCDKR
HHKDKTRSVNDLQVRIRKRTEDDPTVILWLRNLEREKPRYYRDNMKLLLHVISEYGKETVIAALRTCLEKNIYNSLSVQE
ISGSIHRSKDNMNGMTFQAPTSIPETADCHPEKTDINQYNKFFE

Specific function: Involved in the transposition of the insertion sequence (Potential) [H]

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012287
- InterPro:   IPR017894
- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 62170; Mature: 62170

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRTKDACRHQSNNRVIMWYKIRELYSKGFNKSQIAFQLGLHRSTVRRYLKMDEDTLTAK
CCCCHHHHHCCCCCCEEEEEEHHHHHHCCCCCCHHHEECCCCHHHHHHHHHCCCHHHHHH
LQHRRRYPRILDKYERYVCDVLSRYRFLSASQIHDWMKEQYPDLPVVCGKTVYNFVETVR
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHH
RKYNLDKEGLSKRVYEKMPDTPYGEYAQMDFGESRMPTYRDNFVKVYFFVMVMSRSRQKF
HHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE
VYFSCTPFTSALAVYAHELAFAYFGGKPRRIIYDQDKVLLVRENLGDLILTRTFRAFVNE
EEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHCC
QHFQPVFCRPADPESKGKVENVVKYVKRNFLAGRAFNSLEVLNTEVLQWLEKTGNGKIHG
CCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEE
TTRLVPAEEFEIERKYLLPYYGEPVPPKDEPKEYHVRKDNTVRYRTNYYSVPSGTYKNRN
EEEECCCHHHHCCHHEECCCCCCCCCCCCCCCCEEECCCCEEEEEECEEECCCCCCCCCC
TVVWLLENNGHIELYDKESGKLICRHELCPGKGKNVCDKRHHKDKTRSVNDLQVRIRKRT
EEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCHHHHHCHHHHCCCCHHHHEEECCC
EDDPTVILWLRNLEREKPRYYRDNMKLLLHVISEYGKETVIAALRTCLEKNIYNSLSVQE
CCCCEEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHH
ISGSIHRSKDNMNGMTFQAPTSIPETADCHPEKTDINQYNKFFE
HHCHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MDRTKDACRHQSNNRVIMWYKIRELYSKGFNKSQIAFQLGLHRSTVRRYLKMDEDTLTAK
CCCCHHHHHCCCCCCEEEEEEHHHHHHCCCCCCHHHEECCCCHHHHHHHHHCCCHHHHHH
LQHRRRYPRILDKYERYVCDVLSRYRFLSASQIHDWMKEQYPDLPVVCGKTVYNFVETVR
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHH
RKYNLDKEGLSKRVYEKMPDTPYGEYAQMDFGESRMPTYRDNFVKVYFFVMVMSRSRQKF
HHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE
VYFSCTPFTSALAVYAHELAFAYFGGKPRRIIYDQDKVLLVRENLGDLILTRTFRAFVNE
EEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHCC
QHFQPVFCRPADPESKGKVENVVKYVKRNFLAGRAFNSLEVLNTEVLQWLEKTGNGKIHG
CCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEE
TTRLVPAEEFEIERKYLLPYYGEPVPPKDEPKEYHVRKDNTVRYRTNYYSVPSGTYKNRN
EEEECCCHHHHCCHHEECCCCCCCCCCCCCCCCEEECCCCEEEEEECEEECCCCCCCCCC
TVVWLLENNGHIELYDKESGKLICRHELCPGKGKNVCDKRHHKDKTRSVNDLQVRIRKRT
EEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCHHHHHCHHHHCCCCHHHHEEECCC
EDDPTVILWLRNLEREKPRYYRDNMKLLLHVISEYGKETVIAALRTCLEKNIYNSLSVQE
CCCCEEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHH
ISGSIHRSKDNMNGMTFQAPTSIPETADCHPEKTDINQYNKFFE
HHCHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7517394 [H]