Definition Bacteroides vulgatus ATCC 8482 chromosome, complete genome.
Accession NC_009614
Length 5,163,189

Click here to switch to the map view.

The map label for this gene is yjbH [C]

Identifier: 150005943

GI number: 150005943

Start: 4288667

End: 4289521

Strand: Reverse

Name: yjbH [C]

Synonym: BVU_3441

Alternate gene names: 150005943

Gene position: 4289521-4288667 (Counterclockwise)

Preceding gene: 150005944

Following gene: 150005940

Centisome position: 83.08

GC content: 42.46

Gene sequence:

>855_bases
GTGAAATTAAGAACTCTAATATTTCTGGGGGGACTCTTTGGAGGAATGAATGTTATCAAAGGGCAGGCTTTTTATGGTAC
TACAGGACTACTTCATGCACCTACTGCCGTTATGCAGAAAGATAAAACCGTTATGCTGGGAGGAAATATGCTTGATGTAA
ATATACTTTCCCGATATTGGGTGAGAAGTGAATATCATCCCTATACCTATAACTATTATATAAATTGTACTTTGTTTCCT
TGGCTGGAAGTAGCATATACTTGTACGTTGGTAAAGGGGATACATGGTTCTTCTTATTGGCCTCAGCAAACTTGGGGCAG
GTTTACCAATCAGGACAGATCGTTTCATTTCCGGTTGAGGGCATGGAAAGAAGGCTGGTGGAAGGCTTGGACGCCTCAGA
TAGTGATTGGTGCGAATGATCCGGGAAGCCATTCTTCAAATGGAGGTGGAGACATAGATTGGGGGGGCGGTGGTAGCGGA
AACCACAATTACTTGACACGTTATTATCTGGCGGCAACGAAACATGTTGAATTTAGTGGAATAGGTACAGTGGGGGGGCA
TGTAGCTTGGGTTATCGGTAAAGCTATGAGTGATGTGCATTATAGCCGTCTTGCTGCAGGGGTAAACTTTCATTTTGGCA
TGAAGGGCGAAGGTTTCTGGCAGAAAGCTCTGAATGGATTTAATCTGATGGCGGAAGTGTGTCCCGGACATGCGGAAGAT
CTGCATACAGCAACTTATACTGTGAATGTGGGTGGAACTTATTCAATATGGAAAGACCATATCAATCTTATTGCTGAACT
GAATGACGGTAAATTTTTTAGCGGAGGTATATTCTTTAAATTACATCTCAAATAA

Upstream 100 bases:

>100_bases
TGGCAACAACAGGACGAAGATAGCAGTAGGAATAATTTTTCCGAGTATTTTTAATACATCTGTTTTCATGCTGCAAATAT
AAATTAAAATTCATAGAATA

Downstream 100 bases:

>100_bases
CTGACTTGATTTCTAGTGGATGAAGCATTATAAGAATAGCCGGAATCACTTGGAAAAAGTAGTTCCGGCTATTCTTATAT
AACGATATTTGTATGTCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKLRTLIFLGGLFGGMNVIKGQAFYGTTGLLHAPTAVMQKDKTVMLGGNMLDVNILSRYWVRSEYHPYTYNYYINCTLFP
WLEVAYTCTLVKGIHGSSYWPQQTWGRFTNQDRSFHFRLRAWKEGWWKAWTPQIVIGANDPGSHSSNGGGDIDWGGGGSG
NHNYLTRYYLAATKHVEFSGIGTVGGHVAWVIGKAMSDVHYSRLAAGVNFHFGMKGEGFWQKALNGFNLMAEVCPGHAED
LHTATYTVNVGGTYSIWKDHINLIAELNDGKFFSGGIFFKLHLK

Sequences:

>Translated_284_residues
MKLRTLIFLGGLFGGMNVIKGQAFYGTTGLLHAPTAVMQKDKTVMLGGNMLDVNILSRYWVRSEYHPYTYNYYINCTLFP
WLEVAYTCTLVKGIHGSSYWPQQTWGRFTNQDRSFHFRLRAWKEGWWKAWTPQIVIGANDPGSHSSNGGGDIDWGGGGSG
NHNYLTRYYLAATKHVEFSGIGTVGGHVAWVIGKAMSDVHYSRLAAGVNFHFGMKGEGFWQKALNGFNLMAEVCPGHAED
LHTATYTVNVGGTYSIWKDHINLIAELNDGKFFSGGIFFKLHLK
>Mature_284_residues
MKLRTLIFLGGLFGGMNVIKGQAFYGTTGLLHAPTAVMQKDKTVMLGGNMLDVNILSRYWVRSEYHPYTYNYYINCTLFP
WLEVAYTCTLVKGIHGSSYWPQQTWGRFTNQDRSFHFRLRAWKEGWWKAWTPQIVIGANDPGSHSSNGGGDIDWGGGGSG
NHNYLTRYYLAATKHVEFSGIGTVGGHVAWVIGKAMSDVHYSRLAAGVNFHFGMKGEGFWQKALNGFNLMAEVCPGHAED
LHTATYTVNVGGTYSIWKDHINLIAELNDGKFFSGGIFFKLHLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31765; Mature: 31765

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRTLIFLGGLFGGMNVIKGQAFYGTTGLLHAPTAVMQKDKTVMLGGNMLDVNILSRYW
CCEEEEEEEHHHHCCCHHHCCCEEECCCCCCCCCHHHHCCCCEEEECCCEEEHHHHHHHH
VRSEYHPYTYNYYINCTLFPWLEVAYTCTLVKGIHGSSYWPQQTWGRFTNQDRSFHFRLR
HCCCCCCEEEEEEEEEEECHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEEE
AWKEGWWKAWTPQIVIGANDPGSHSSNGGGDIDWGGGGSGNHNYLTRYYLAATKHVEFSG
EECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECEEEECC
IGTVGGHVAWVIGKAMSDVHYSRLAAGVNFHFGMKGEGFWQKALNGFNLMAEVCPGHAED
CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHCCCHHHHHHHCCCCCCC
LHTATYTVNVGGTYSIWKDHINLIAELNDGKFFSGGIFFKLHLK
CEEEEEEEECCCCHHHHHHCEEEEEEECCCEEEECEEEEEEEEC
>Mature Secondary Structure
MKLRTLIFLGGLFGGMNVIKGQAFYGTTGLLHAPTAVMQKDKTVMLGGNMLDVNILSRYW
CCEEEEEEEHHHHCCCHHHCCCEEECCCCCCCCCHHHHCCCCEEEECCCEEEHHHHHHHH
VRSEYHPYTYNYYINCTLFPWLEVAYTCTLVKGIHGSSYWPQQTWGRFTNQDRSFHFRLR
HCCCCCCEEEEEEEEEEECHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEEE
AWKEGWWKAWTPQIVIGANDPGSHSSNGGGDIDWGGGGSGNHNYLTRYYLAATKHVEFSG
EECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECEEEECC
IGTVGGHVAWVIGKAMSDVHYSRLAAGVNFHFGMKGEGFWQKALNGFNLMAEVCPGHAED
CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHCCCHHHHHHHCCCCCCC
LHTATYTVNVGGTYSIWKDHINLIAELNDGKFFSGGIFFKLHLK
CEEEEEEEECCCCHHHHHHCEEEEEEECCCEEEECEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA