| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150005852
Identifier: 150005852
GI number: 150005852
Start: 4183395
End: 4184399
Strand: Reverse
Name: 150005852
Synonym: BVU_3348
Alternate gene names: NA
Gene position: 4184399-4183395 (Counterclockwise)
Preceding gene: 150005853
Following gene: 150005851
Centisome position: 81.04
GC content: 44.68
Gene sequence:
>1005_bases GTGAGCATCTGTGTGCTTGCGGAACGTTATGGCGTAAAAGGACAGACTCTTCGTAAACAATACAAGGAGAAAATCAGTGA TTACCGGAACTGGGACCAACTCGAACATGCGCATGACTACCTCCTTTATCCTGAAAACATTGGAGAAAACCTTTCTTTGG ATGAAACTTGCCTGAGCAATGGAGATGTTTATACGATTCTGACCAATAAAGCAGCCAAAGGCCGTAAGGGGGCTTTAGTT GCAATGGTTCGTGGAGTGGCCACAGATGCGGTAAGCGGAATCTTGCGCAGGCTTCCGCACCGGAAACGGCTGTCTGTCAA GACTGTCACTACAGATTTATCTTCAGCCATGATGCTGACGGTCAGAAAGGTGTTTCCTGCCGCAAAGCTGATCAATGACC GTTTTCATGTACAGCAGCTCATGTCTGAAGCTGTTGACCGGTTAAGAATACGCTATCGGTGGAAAGTACTTGATGCGGAA AATCAGGCTATCAGGGAGCACCGTCAAAAGAAGAAAGAAGCAAAGAGTAAGGCGGAAAGGGAGAGAATAGGGAAATGGGA GCCTGAAAGAATGGAGAACGGAGAAACCCTGCCACAGATAGTAAGCAGAAGCAAGCATATTATACTGAAACACTGGAGCA AATGGAATGAACAGCAAAAGACCAGGGCTGCCATTCTCTTTGATAAATTCCCCAAGCTTCTGGAAGGATACAGCCTTAGC ATGAAACTGACAGACATCTTCAACAAGAAGTCAGGTCCCGATGAAGCAAGGCTAAATCTCGCAAGATGGTACAATGAAGT GGAAAAGTTTGACTATATGGAGTTCAACAAGGTACTTGATACCTTTTCAAACCATAGTACGACCATCATAAATTATTTTG AAGAACGATTGACAAATGCTTCAGCGGAGTCGTTCAATGCTAAAATCAAAGCTTTTCGAAGCCAGTTAAGAGGGGTGGCT GATCTGAAATTCTTCATGTTCAGACTGGCTAGGCTATACGCTTAA
Upstream 100 bases:
>100_bases GAAATCTTCAGCTATGACTGGGATTTATCCGAATTTGACGGTACACGGCTCAATTCTGAGTTCGTTTCTTTTTTAAAAGA AGGAGATTGAATCTACTCCT
Downstream 100 bases:
>100_bases AAGAAAGCTTACCAACCAGGAAAATCCGCTGACCCGTTAGTTTTAAAAAGAACCTGCTGGGTGTGCAAGAAGAATTACTT CGGTTTGCATACAAACTCAC
Product: transposase
Products: NA
Alternate protein names: LOW QUALITY PROTEIN Transposase
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MSICVLAERYGVKGQTLRKQYKEKISDYRNWDQLEHAHDYLLYPENIGENLSLDETCLSNGDVYTILTNKAAKGRKGALV AMVRGVATDAVSGILRRLPHRKRLSVKTVTTDLSSAMMLTVRKVFPAAKLINDRFHVQQLMSEAVDRLRIRYRWKVLDAE NQAIREHRQKKKEAKSKAERERIGKWEPERMENGETLPQIVSRSKHIILKHWSKWNEQQKTRAAILFDKFPKLLEGYSLS MKLTDIFNKKSGPDEARLNLARWYNEVEKFDYMEFNKVLDTFSNHSTTIINYFEERLTNASAESFNAKIKAFRSQLRGVA DLKFFMFRLARLYA
Sequences:
>Translated_334_residues MSICVLAERYGVKGQTLRKQYKEKISDYRNWDQLEHAHDYLLYPENIGENLSLDETCLSNGDVYTILTNKAAKGRKGALV AMVRGVATDAVSGILRRLPHRKRLSVKTVTTDLSSAMMLTVRKVFPAAKLINDRFHVQQLMSEAVDRLRIRYRWKVLDAE NQAIREHRQKKKEAKSKAERERIGKWEPERMENGETLPQIVSRSKHIILKHWSKWNEQQKTRAAILFDKFPKLLEGYSLS MKLTDIFNKKSGPDEARLNLARWYNEVEKFDYMEFNKVLDTFSNHSTTIINYFEERLTNASAESFNAKIKAFRSQLRGVA DLKFFMFRLARLYA >Mature_333_residues SICVLAERYGVKGQTLRKQYKEKISDYRNWDQLEHAHDYLLYPENIGENLSLDETCLSNGDVYTILTNKAAKGRKGALVA MVRGVATDAVSGILRRLPHRKRLSVKTVTTDLSSAMMLTVRKVFPAAKLINDRFHVQQLMSEAVDRLRIRYRWKVLDAEN QAIREHRQKKKEAKSKAERERIGKWEPERMENGETLPQIVSRSKHIILKHWSKWNEQQKTRAAILFDKFPKLLEGYSLSM KLTDIFNKKSGPDEARLNLARWYNEVEKFDYMEFNKVLDTFSNHSTTIINYFEERLTNASAESFNAKIKAFRSQLRGVAD LKFFMFRLARLYA
Specific function: Unknown
COG id: COG3464
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39030; Mature: 38899
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSICVLAERYGVKGQTLRKQYKEKISDYRNWDQLEHAHDYLLYPENIGENLSLDETCLSN CCEEEEHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCEECCCCCCCCCCCCHHHHCC GDVYTILTNKAAKGRKGALVAMVRGVATDAVSGILRRLPHRKRLSVKTVTTDLSSAMMLT CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH VRKVFPAAKLINDRFHVQQLMSEAVDRLRIRYRWKVLDAENQAIREHRQKKKEAKSKAER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHH ERIGKWEPERMENGETLPQIVSRSKHIILKHWSKWNEQQKTRAAILFDKFPKLLEGYSLS HHCCCCCCHHHCCCCHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCE MKLTDIFNKKSGPDEARLNLARWYNEVEKFDYMEFNKVLDTFSNHSTTIINYFEERLTNA EEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC SAESFNAKIKAFRSQLRGVADLKFFMFRLARLYA CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SICVLAERYGVKGQTLRKQYKEKISDYRNWDQLEHAHDYLLYPENIGENLSLDETCLSN CEEEEHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCEECCCCCCCCCCCCHHHHCC GDVYTILTNKAAKGRKGALVAMVRGVATDAVSGILRRLPHRKRLSVKTVTTDLSSAMMLT CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH VRKVFPAAKLINDRFHVQQLMSEAVDRLRIRYRWKVLDAENQAIREHRQKKKEAKSKAER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHH ERIGKWEPERMENGETLPQIVSRSKHIILKHWSKWNEQQKTRAAILFDKFPKLLEGYSLS HHCCCCCCHHHCCCCHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCE MKLTDIFNKKSGPDEARLNLARWYNEVEKFDYMEFNKVLDTFSNHSTTIINYFEERLTNA EEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC SAESFNAKIKAFRSQLRGVADLKFFMFRLARLYA CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA